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揭示不同施肥系统下葱蒜根际微生物群落及其功能数据集。

Unveiling the Allium ampeloprasum rhizosphere microbiome and its functional dataset under different fertilization systems.

作者信息

Babalola Olubukola Oluranti, Shittu Oluwaseun Emmanuel, Enagbonma Ben Jesuorsemwen

机构信息

Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Private Mail Bag X2046, Mmabatho, 2735, South Africa.

Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK.

出版信息

BMC Genom Data. 2025 Aug 6;26(1):54. doi: 10.1186/s12863-025-01349-8.

DOI:10.1186/s12863-025-01349-8
PMID:40770608
Abstract

Leek (Allium ampeloprasum) is a nutritious vegetable popularly cultivated in South Africa and most regions of the world. It is generally recognised as a source of vitamins and vegetables. Nevertheless, little is known about its rhizosphere microbiome and its microbial functional dataset under various fertilization systems. Therefore, this study intended to unveil the rhizosphere microbiome of Allium ampeloprasum and their functional datasets through shotgun metagenomics sequencing analysis.

摘要

韭菜(葱属)是一种营养丰富的蔬菜,在南非和世界上大多数地区广泛种植。它通常被认为是维生素和蔬菜的来源。然而,对于其根际微生物群落以及不同施肥系统下的微生物功能数据集,人们了解甚少。因此,本研究旨在通过鸟枪法宏基因组测序分析揭示韭菜的根际微生物群落及其功能数据集。

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本文引用的文献

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Shotgun metagenomics captures more microbial diversity than targeted 16S rRNA gene sequencing for field specimens and preserved museum specimens.
shotgun 宏基因组学比靶向 16S rRNA 基因测序更能捕获野外标本和保存的博物馆标本中的微生物多样性。
PLoS One. 2023 Sep 19;18(9):e0291540. doi: 10.1371/journal.pone.0291540. eCollection 2023.
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Functional Perspective of Leeks: Active Components, Health Benefits and Action Mechanisms.韭菜的功能视角:活性成分、健康益处及作用机制
Foods. 2023 Aug 27;12(17):3225. doi: 10.3390/foods12173225.
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Metagenomics Reveals the Microbiome Multifunctionalities of Environmental Importance From Termite Mound Soils.宏基因组学揭示了白蚁丘土壤中具有环境重要性的微生物群落多功能性。
Bioinform Biol Insights. 2023 Jun 29;17:11779322231184025. doi: 10.1177/11779322231184025. eCollection 2023.
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BMC Microbiol. 2019 Feb 4;19(1):30. doi: 10.1186/s12866-019-1400-3.
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Methods. 2016 Jun 1;102:3-11. doi: 10.1016/j.ymeth.2016.02.020. Epub 2016 Mar 21.
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