Suppr超能文献

变构药物中的驻留时间是如何起作用的。

How residence time works in allosteric drugs.

作者信息

Nussinov Ruth, Jang Hyunbum

机构信息

Computational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Cancer Innovation Laboratory, National Cancer Institute, Frederick, MD 21702, USA; Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.

Computational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Cancer Innovation Laboratory, National Cancer Institute, Frederick, MD 21702, USA.

出版信息

Curr Opin Struct Biol. 2025 Aug 29;94:103149. doi: 10.1016/j.sbi.2025.103149.

Abstract

Drug residence time defines the duration the drug is bound to its protein target. It is a crucial determinant of drug action. Yet, a priori estimating it in the design could be the most challenging. The mechanisms of allosteric and orthosteric drugs differ in how they affect it. Binding at the active site, the residence time of orthosteric drugs is primarily affected by binding kinetics, which is not the case for allosteric drugs. Allosteric drugs determine the orthosteric drug residence time by the nature and extent of the population shift that they promote, which modulate the active site conformation. However, cooperative binding is bidirectional; orthosteric drug binding at the active site can increase (decrease) residence time at the allosteric site.

摘要

药物驻留时间定义了药物与蛋白质靶点结合的持续时间。它是药物作用的关键决定因素。然而,在设计过程中先验估计它可能是最具挑战性的。变构药物和正构药物影响药物驻留时间的机制不同。正构药物在活性位点结合时,其驻留时间主要受结合动力学影响,变构药物则不然。变构药物通过它们促进的群体转移的性质和程度来决定正构药物的驻留时间,这种群体转移会调节活性位点的构象。然而,协同结合是双向的;正构药物在活性位点的结合可以增加(减少)在变构位点的驻留时间。

相似文献

1
How residence time works in allosteric drugs.
Curr Opin Struct Biol. 2025 Aug 29;94:103149. doi: 10.1016/j.sbi.2025.103149.
3
The Black Book of Psychotropic Dosing and Monitoring.
Psychopharmacol Bull. 2024 Jul 8;54(3):8-59.
4
Adapting Safety Plans for Autistic Adults with Involvement from the Autism Community.
Autism Adulthood. 2025 May 28;7(3):293-302. doi: 10.1089/aut.2023.0124. eCollection 2025 Jun.
6
"In a State of Flow": A Qualitative Examination of Autistic Adults' Phenomenological Experiences of Task Immersion.
Autism Adulthood. 2024 Sep 16;6(3):362-373. doi: 10.1089/aut.2023.0032. eCollection 2024 Sep.
7
Brexanolone, zuranolone and related neurosteroid GABA receptor positive allosteric modulators for postnatal depression.
Cochrane Database Syst Rev. 2025 Jun 26;6(6):CD014624. doi: 10.1002/14651858.CD014624.pub2.
10
Chromosome organization by one-sided and two-sided loop extrusion.
Elife. 2020 Apr 6;9:e53558. doi: 10.7554/eLife.53558.

本文引用的文献

3
Sequence and Structure at Play in Designing Allosteric Drugs and Alleviating the Drug Resistance.
J Mol Biol. 2025 Oct 15;437(20):169206. doi: 10.1016/j.jmb.2025.169206. Epub 2025 May 14.
4
Resistance to Allosteric Inhibitors.
J Mol Biol. 2025 Oct 15;437(20):169133. doi: 10.1016/j.jmb.2025.169133. Epub 2025 Apr 10.
5
A Folding-Docking-Affinity framework for protein-ligand binding affinity prediction.
Commun Chem. 2025 Apr 7;8(1):108. doi: 10.1038/s42004-025-01506-1.
6
Beyond First-Generation KRAS Inhibitors: BBO-8520 Tests the Dual Mechanism Hypothesis.
Cancer Discov. 2025 Mar 3;15(3):455-457. doi: 10.1158/2159-8290.CD-24-1885.
7
Pioneer in Molecular Biology: Conformational Ensembles in Molecular Recognition, Allostery, and Cell Function.
J Mol Biol. 2025 Jun 1;437(11):169044. doi: 10.1016/j.jmb.2025.169044. Epub 2025 Feb 25.
8
Rational Design of Ligands with Optimized Residence Time.
ACS Pharmacol Transl Sci. 2025 Jan 14;8(2):613-615. doi: 10.1021/acsptsci.4c00740. eCollection 2025 Feb 14.
10
Allostery can convert binding free energies into concerted domain motions in enzymes.
Nat Commun. 2024 Nov 22;15(1):10109. doi: 10.1038/s41467-024-54421-9.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验