Ganduri Y L, Sadda S R, Datta M W, Jambukeswaran R K, Datta P
Department of Biological Chemistry, University of Michigan, Ann Arbor 48109-0606.
Mol Gen Genet. 1993 Sep;240(3):395-402. doi: 10.1007/BF00280391.
The tdcB and tdcC genes of the tdcABC operon of Escherichia coli encode threonine dehydratase and a threonine-serine permease, respectively. These proteins are involved in transport and metabolism of threonine and serine during anaerobic growth. In this study, we functionally characterized tdcA, which encodes a 35 kDa polypeptide consisting of 312 amino acid residues. Non-polar and partially polar mutations introduced into tdcA drastically reduced the expression of the genes down-stream from tdcA. Complementation studies using single-copy chromosomal integrants of a tdcB-lacZ fusion harboring an in-frame deletion of tdcA with chromosomal or plasmid-borne tdcA+ in trans showed complete restoration of tdc operon expression in vivo. The amino acid sequence at the amino-terminal end of TdcA revealed a significant homology to the helix-turn-helix motifs of typical DNA binding proteins. Sequence alignment of TdcA with LysR also showed considerable sequence similarity throughout their entire lengths. Our results suggest that TdcA is related to the LysR family of proteins by common ancestry and, based on its functional role in tdc expression, belongs to the LysR family of transcriptional activators.
大肠杆菌tdcABC操纵子的tdcB和tdcC基因分别编码苏氨酸脱水酶和苏氨酸-丝氨酸通透酶。这些蛋白质在厌氧生长过程中参与苏氨酸和丝氨酸的运输与代谢。在本研究中,我们对tdcA进行了功能表征,tdcA编码一个由312个氨基酸残基组成的35 kDa多肽。引入tdcA的非极性和部分极性突变极大地降低了tdcA下游基因的表达。使用携带tdcA框内缺失的tdcB-lacZ融合基因的单拷贝染色体整合体与染色体或质粒携带的反式tdcA+进行互补研究,结果显示tdc操纵子表达在体内完全恢复。TdcA氨基末端的氨基酸序列与典型DNA结合蛋白的螺旋-转角-螺旋基序具有显著同源性。TdcA与LysR的序列比对在其全长范围内也显示出相当大的序列相似性。我们的结果表明,TdcA通过共同祖先与LysR家族蛋白相关,并且基于其在tdc表达中的功能作用,属于转录激活因子的LysR家族。