Blaxter M L, Raghavan N, Ghosh I, Guiliano D, Lu W, Williams S A, Slatko B, Scott A L
Institute of Cell, Animal and Population Biology, University of Edinburgh, UK.
Mol Biochem Parasitol. 1996 Apr;77(1):77-93. doi: 10.1016/0166-6851(96)02571-6.
We have used a tag sequencing approach to survey genes expressed in the third stage infective larvae of the human filarial nematode parasite Brugia malayi. RNA was isolated from late vector-stage L3 larvae after days 9 or 10 of infection in mosquitos, and converted to cDNA by reverse transcriptase. Double-stranded cDNA was produced by either conventional methods (non-SL cDNA library) or by PCR using the nematode spliced leader (SLI) and oligo(dT) primers (SL cDNA library). Two clone libraries (one from SL and one from non-SL cDNAs) were constructed in lambda ZapII. A set of these full-length clones was selected and 596 inserts were sequenced from the 5' end. We have identified 364 B. malayi genes (the majority of which are new) that encode housekeeping proteins, structural proteins, proteins of immediate immunological or drug-discovery interest as well as a large class of novel sequences which may prove to have significant involvement in host invasion. Extensive, genome-wide approaches to the analysis of larval gene expression are now possible for B. malayi. We present several examples of this approach.
我们采用了标签测序方法来研究人类丝虫线虫寄生虫马来布鲁线虫第三期感染性幼虫中表达的基因。在蚊子感染9天或10天后,从晚期媒介阶段的L3幼虫中分离出RNA,并通过逆转录酶将其转化为cDNA。双链cDNA通过常规方法(非SL cDNA文库)或使用线虫剪接引导序列(SLI)和寡聚(dT)引物的PCR方法(SL cDNA文库)产生。在λZapII中构建了两个克隆文库(一个来自SL cDNA,一个来自非SL cDNA)。选择了一组这些全长克隆,并从5'端对596个插入片段进行了测序。我们已经鉴定出364个马来布鲁线虫基因(其中大多数是新基因),它们编码管家蛋白、结构蛋白、具有直接免疫学或药物发现意义的蛋白,以及一大类可能被证明在宿主入侵中具有重要作用的新序列。现在,对于马来布鲁线虫来说,广泛的全基因组方法来分析幼虫基因表达成为可能。我们展示了这种方法的几个例子。