Setterquist R A, Smith G K, Oakley T H, Lee Y H, Fox G E
Department of Biochemical and Biophysical Sciences, University of Houston, TX 77204-5934, USA.
Gene. 1996 Dec 12;183(1-2):237-42. doi: 10.1016/s0378-1119(96)00402-7.
A strategy suggested by comparative genomic studies was used to amplify the entire Vibrio proteolyticus (Vp) gene for ribosomal protein L18. Vp L18 and its flanking regions were sequenced and compared with the deduced amino acid (aa) sequences of other known L18 proteins. A 26-aa residue segment at the carboxy terminus contains many strongly conserved residues and may be critical for the L18 interaction with 5S rRNA. This approach should allow rapid characterization of L18 from large numbers of bacteria. Both Vp L18 and Escherichia coli (Ec) L18 were overproduced and purified using a T7 expression vector which fuses an N-terminal peptide segment (His-tag) containing 6 histidine residues to the recombinant protein. The purified fusion proteins, Vp His::L18 and Ec His::L18, were both found to bind to either the Vp 5S or Ec 5S rRNAs in vitro. Vp His::L18 protein was also shown to incorporate into Ec ribosomes in vivo. This His-tag strategy likely will have general applicability for the study of ribosomal proteins in vitro and in vivo.
采用比较基因组研究提出的策略扩增了溶蛋白弧菌(Vp)核糖体蛋白L18的完整基因。对Vp L18及其侧翼区域进行了测序,并与其他已知L18蛋白的推导氨基酸(aa)序列进行了比较。羧基末端的一个26个氨基酸残基的片段包含许多高度保守的残基,可能对L18与5S rRNA的相互作用至关重要。这种方法应能快速鉴定大量细菌中的L18。使用T7表达载体过量表达并纯化了Vp L18和大肠杆菌(Ec)L18,该载体将含有6个组氨酸残基的N端肽段(His标签)与重组蛋白融合。纯化的融合蛋白Vp His::L18和Ec His::L18在体外均被发现能与Vp 5S或Ec 5S rRNA结合。Vp His::L18蛋白在体内也被证明能掺入Ec核糖体。这种His标签策略可能在体外和体内核糖体蛋白的研究中具有普遍适用性。