相似文献
1
Designer DNA-binding drugs: the crystal structure of a meta-hydroxy analogue of Hoechst 33258 bound to d(CGCGAATTCGCG)2.
Nucleic Acids Res. 1996 Dec 15;24(24):4882-9. doi: 10.1093/nar/24.24.4882.
2
Molecular design of DNA-directed ligands with specific interactions: solution NMR studies of the interaction of a m-hydroxy analogue of Hoechst 33258 with d(CGCGAATTCGCG)2.
Biochemistry. 1994 Jul 19;33(28):8442-52. doi: 10.1021/bi00194a008.
3
Structure of a bis-amidinium derivative of hoechst 33258 complexed to dodecanucleotide d(CGCGAATTCGCG)2: the role of hydrogen bonding in minor groove drug-DNA recognition.
Nucleic Acids Res. 1997 Apr 15;25(8):1510-5. doi: 10.1093/nar/25.8.1510.
4
Variability in DNA minor groove width recognised by ligand binding: the crystal structure of a bis-benzimidazole compound bound to the DNA duplex d(CGCGAATTCGCG)2.
Nucleic Acids Res. 1995 Sep 25;23(18):3678-84. doi: 10.1093/nar/23.18.3678.
5
Three-dimensional crystal structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor-groove-binding drug Hoechst 33258.
Eur J Biochem. 1994 Jun 15;222(3):721-6. doi: 10.1111/j.1432-1033.1994.tb18917.x.
6
The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG).
Nucleic Acids Res. 1988 Mar 25;16(6):2671-90. doi: 10.1093/nar/16.6.2671.
7
Isohelicity and phasing in drug--DNA sequence recognition: crystal structure of a tris(benzimidazole)--oligonucleotide complex.
Biochemistry. 1996 Oct 29;35(43):13745-52. doi: 10.1021/bi960421m.
8
Sequence-dependent effects in drug-DNA interaction: the crystal structure of Hoechst 33258 bound to the d(CGCAAATTTGCG)2 duplex.
Nucleic Acids Res. 1994 May 11;22(9):1607-12. doi: 10.1093/nar/22.9.1607.
9
Structural consequences of a carcinogenic alkylation lesion on DNA: effect of O6-ethylguanine on the molecular structure of the d(CGC[e6G]AATTCGCG)-netropsin complex.
Biochemistry. 1992 Dec 1;31(47):11823-34. doi: 10.1021/bi00162a022.
10
Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry. 1991 Oct 22;30(42):10294-306. doi: 10.1021/bi00106a030.
引用本文的文献
1
Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil.
J Nucleic Acids. 2010 Oct 7;2010:107289. doi: 10.4061/2010/107289.
2
Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res. 2010 Oct;38(19):6737-45. doi: 10.1093/nar/gkq519. Epub 2010 Jun 16.
3
Hydration of drug-DNA complexes: greater water uptake for adriamycin compared to daunomycin.
J Med Chem. 2008 Oct 9;51(19):5909-11. doi: 10.1021/jm800826y. Epub 2008 Sep 13.
4
Hydration changes in the association of Hoechst 33258 with DNA.
Biochemistry. 2005 Dec 27;44(51):16988-97. doi: 10.1021/bi051769x.
5
A host-guest approach for determining drug-DNA interactions: an example using netropsin.
Nucleic Acids Res. 2005 Jul 27;33(13):4106-16. doi: 10.1093/nar/gki717. Print 2005.
6
Knowledge-based elastic potentials for docking drugs or proteins with nucleic acids.
Biophys J. 2005 Feb;88(2):1166-90. doi: 10.1529/biophysj.104.043612. Epub 2004 Oct 22.
7
Structural insights into the effect of hydration and ions on A-tract DNA: a molecular dynamics study.
Biophys J. 2003 Sep;85(3):1805-16. doi: 10.1016/S0006-3495(03)74609-8.
8
Sequence-specific minor groove binding by bis-benzimidazoles: water molecules in ligand recognition.
Nucleic Acids Res. 2003 Mar 1;31(5):1514-24. doi: 10.1093/nar/gkg237.
9
Induced fit DNA recognition by a minor groove binding analogue of Hoechst 33258: fluctuations in DNA A tract structure investigated by NMR and molecular dynamics simulations.
Nucleic Acids Res. 2001 Feb 1;29(3):693-702. doi: 10.1093/nar/29.3.693.
10
Structures of m-iodo Hoechst-DNA complexes in crystals with reduced solvent content: implications for minor groove binder drug design.
Nucleic Acids Res. 2000 Mar 1;28(5):1252-8. doi: 10.1093/nar/28.5.1252.
本文引用的文献
1
Crystallographic R factor refinement by molecular dynamics.
Science. 1987 Jan 23;235(4787):458-60. doi: 10.1126/science.235.4787.458.
2
Determination of the NMR solution structure of the Hoechst 33258-d(GTGGAATTCCAC)2 complex and comparison with the X-ray crystal structure.
Structure. 1993 Nov 15;1(3):177-86. doi: 10.1016/0969-2126(93)90019-d.
3
NMR and molecular modeling studies of the interaction of berenil and pentamidine with d(CGCAAATTTGCG)2.
Eur J Biochem. 1993 May 1;213(3):1175-84. doi: 10.1111/j.1432-1033.1993.tb17868.x.
4
Molecular structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor groove binding drug netropsin.
Biochemistry. 1993 Aug 24;32(33):8403-10. doi: 10.1021/bi00084a004.
5
Crystal structure of d(CGCGAATTCGCG) complexed with propamidine, a short-chain homologue of the drug pentamidine.
Biochemistry. 1993 Dec 21;32(50):13838-43. doi: 10.1021/bi00213a012.
6
Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA.
Biochemistry. 1994 Mar 15;33(10):3055-62. doi: 10.1021/bi00176a039.
7
Targeting DNA-binding drugs to sequence-specific transcription factor.DNA complexes. Differential effects of intercalating and minor groove binding drugs.
J Biol Chem. 1994 Dec 9;269(49):31051-8.
8
Dicationic diarylfurans as anti-Pneumocystis carinii agents.
J Med Chem. 1995 Mar 17;38(6):912-6. doi: 10.1021/jm00006a009.
9
DNA minor groove-binding ligands: a different class of mammalian DNA topoisomerase I inhibitors.
Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):8131-5. doi: 10.1073/pnas.90.17.8131.
10
Interaction of Hoechst 33258 with the minor groove of the A + T-rich DNA duplex d(GGTAATTACC)2 studied in solution by NMR spectroscopy.
Eur J Biochem. 1993 Feb 1;211(3):437-47. doi: 10.1111/j.1432-1033.1993.tb17569.x.
Zotero 插件