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通过质谱法鉴定尖孢镰刀菌内切葡聚糖酶I的催化亲核试剂

Identification of the catalytic nucleophile of endoglucanase I from Fusarium oxysporum by mass spectrometry.

作者信息

Mackenzie L F, Davies G J, Schülein M, Withers S G

机构信息

Department of Chemistry, University of British Columbia, Vancouver, Canada.

出版信息

Biochemistry. 1997 May 13;36(19):5893-901. doi: 10.1021/bi962962h.

Abstract

The endoglucanase EG I from Fusarium oxysporum catalyzes the hydrolysis of cellulose via a double-displacement mechanism involving the formation and hydrolysis of a glycosyl-enzyme intermediate. Treatment of EG I with 2',4'-dinitrophenyl-2-deoxy-2-fluoro-beta-D-cellobioside results in the time-dependent inactivation of the enzyme (k(i) = 1.36 min(-1), Ki = 0.88 mM) via trapping of a covalent 2-deoxy-2-fluorocellobiosyl-enzyme intermediate. This intermediate is, however, catalytically competent undergoing transglycosylation, thus reactivation, in the presence of D-cellobiose. Analysis of a peptic digest of the inactivated enzyme by HPLC/ESMS/MS in the neutral loss mode allowed identification of a 2-fluorocellobiosyl-labeled peptide containing Glu197. This was confirmed by comparative mapping studies and subsequent Edman degradation analysis. This residue is completely conserved in glycosidase family 7, to which EG I belongs, consistent with its key role as the catalytic nucleophile.

摘要

尖孢镰刀菌的内切葡聚糖酶EG I通过双置换机制催化纤维素水解,该机制涉及糖基酶中间体的形成和水解。用2',4'-二硝基苯基-2-脱氧-2-氟-β-D-纤维二糖处理EG I会导致酶随时间失活(k(i) = 1.36 min(-1),Ki = 0.88 mM),这是通过捕获共价的2-脱氧-2-氟纤维二糖基酶中间体实现的。然而,在D-纤维二糖存在的情况下,该中间体具有催化活性,能够进行转糖基化反应,从而实现再激活。通过HPLC/ESMS/MS在中性丢失模式下对内切葡聚糖酶的胃蛋白酶消化产物进行分析,鉴定出了一个含有Glu197的2-氟纤维二糖基标记肽段。这通过比较图谱研究和随后的埃德曼降解分析得到了证实。该残基在EG I所属的糖苷酶家族7中完全保守,这与其作为催化亲核试剂的关键作用一致。

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