Hendrickson F M, Burkard F, Glaeser R M
Life Sciences Division, Donner Laboratory, University of California, Berkeley 94720, USA.
Biophys J. 1998 Sep;75(3):1446-54. doi: 10.1016/S0006-3495(98)74063-9.
Structural intermediates occurring in the photocycle of wild-type bacteriorhodopsin are trapped by illuminating hydrated, glucose-embedded purple membrane at 170 K, 220 K, 230 K, and 240 K. We characterize light-induced changes in protein conformation by electron diffraction difference Fourier maps, and relate these to previous work on photocycle intermediates by infrared (FTIR) spectroscopy. Samples illuminated at 170 K are confirmed by FTIR spectroscopy to be in the L state; a difference Fourier projection map shows no structural change within the 0.35-nm resolution limit of our data. Difference maps obtained with samples illuminated at 220 K, 230 K, and 240 K, respectively, reveal a progressively larger structural response in helix F when the protein is still in the M state, as judged by the FTIR spectra. Consistent with previous structural studies, an adjustment in the position or in the degree of ordering of helix G accompanies this motion. The model of the photocycle emerging from this and previous studies is that bacteriorhodopsin experiences minimal change in protein structure until a proton is transferred from the Schiff base to Asp85. The M intermediate then undergoes a conformational evolution that opens a hydrated "half-channel," allowing the subsequent reprotonation of the Schiff base by Asp96.
通过在170K、220K、230K和240K下照射水合的、嵌入葡萄糖的紫膜,捕获野生型细菌视紫红质光循环中出现的结构中间体。我们通过电子衍射差傅里叶图来表征光诱导的蛋白质构象变化,并将这些变化与之前通过红外(FTIR)光谱对光循环中间体的研究联系起来。FTIR光谱证实,在170K下照射的样品处于L状态;一个差傅里叶投影图显示,在我们数据的0.35纳米分辨率极限内没有结构变化。分别用在220K、230K和240K下照射的样品获得的差图显示,当蛋白质仍处于M状态时(根据FTIR光谱判断),螺旋F中的结构响应逐渐增大。与之前的结构研究一致,螺旋G的位置或有序度的调整伴随着这种运动。从这项研究和之前的研究中得出的光循环模型是,在质子从席夫碱转移到Asp85之前,细菌视紫红质的蛋白质结构变化最小。然后,M中间体经历构象演变,打开一个水合的“半通道”,从而使席夫碱随后被Asp96再质子化。