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  3. 人类大脑记忆机制的神经生物学基础与动态过程研究综述

人类大脑记忆机制的神经生物学基础与动态过程研究综述

深度研究匿名用户发表于 2025年10月23日 10:4117阅读
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1. 记忆的分类体系与核心特征

1.1 基于时间尺度的记忆类型划分

人类大脑的记忆系统是一个高度复杂且精密的认知功能,它允许我们编码、存储和提取信息,从而适应环境并进行学习。基于信息在系统中停留的时间长度,记忆可以被划分为瞬时记忆(感觉记忆)、短期记忆(工作记忆)和长期记忆三大类型,每种类型在定义、持续时间和神经关联上都表现出显著差异。

瞬时记忆(感觉记忆)

瞬时记忆是信息进入大脑的第一站,它以原始的感官形式(如视觉、听觉、触觉)短暂地保留刺激。这种记忆的持续时间极短,通常只有几百毫秒到数秒。例如,听觉瞬时记忆(回响记忆)能够在大脑中短暂保留声音信息,其神经关联主要涉及听觉皮层(如颞上回)的自动变化检测机制 12。研究表明,在听觉皮层中,不同声音属性(如频率、强度、持续时间)在感觉记忆中可能存在独立的神经表征 3。瞬时记忆的容量被认为是较大的,但其快速衰减的特性使其成为一个转瞬即逝的信息缓冲区,为后续的认知加工提供原始数据 4。

短期记忆(工作记忆)

短期记忆,也常被称为工作记忆,是指能够暂时保持和操作少量信息以完成当前任务的记忆系统 5。它的持续时间比瞬时记忆长,通常为数秒到一分钟左右,且容量有限,经典观点认为其能够同时处理大约7±2个信息块 4。工作记忆不仅仅是一个被动的信息存储器,它还涉及对信息的积极处理和操作,例如在心算或理解复杂句子时。工作记忆的神经基础广泛,主要涉及前额叶皮层、顶叶皮层等区域 6。前额叶皮层在工作记忆的维持和执行功能中发挥着关键的调控作用,例如,它参与了信息的主动保持、抑制无关信息以及任务导向的注意力分配 6。与短期记忆密切相关的是,工作记忆的衰退可能与神经振荡(如alpha波段)的模式变化相关,而这种衰退可以通过时间预期来缓解 7。研究还发现,场独立型学习者在感觉记忆阶段和工作记忆编码存储阶段,表现出更高的效率 8。

长期记忆

长期记忆是信息经过巩固后,能够被永久或长时间存储的记忆类型,其容量理论上是无限的,持续时间可以从数分钟到数年,甚至一生 4。长期记忆的形成需要经历编码、巩固、存储和提取等复杂过程 9。与短期记忆主要依赖于神经元的瞬时活动不同,长期记忆的存储涉及突触连接的结构性改变和基因表达的调控,这些变化使得记忆痕迹(engrams)能够稳定地保留下来 910。长期记忆的神经关联非常广泛,但海马体在新的长期记忆(尤其是陈述性记忆)的形成和巩固中扮演着核心角色,而记忆最终会被转移并存储在新皮层等广泛的脑区中,形成一个分布式网络 41112。睡眠被认为是促进长期记忆巩固的关键时期,因为它有助于记忆痕迹从海马体向新皮层的系统性转移 1113。

1.2 基于内容属性的记忆功能分类

除了基于时间尺度的分类外,记忆还可以根据其内容属性和提取方式的不同,划分为外显记忆(Explicit Memory)和内隐记忆(Implicit Memory)两大功能类别。这两种记忆在认知特征和神经基础方面存在显著差异,但有时也存在复杂的相互作用和边界 14。

外显记忆(陈述性记忆)

外显记忆,又称陈述性记忆,是指能够被有意识地回忆和陈述的记忆。它涉及对事实、事件和概念的记忆,通常需要主动的提取过程。外显记忆又可细分为情景记忆和语义记忆。

  • 情景记忆(Episodic Memory):情景记忆是对个人经历过的特定事件的记忆,包括事件发生的时间、地点和情境等细节,即“什么(what)”、“哪里(where)”和“何时(when)”的信息 15。例如,回忆去年夏天旅行的某个特定瞬间,或是第一次骑自行车的经历。情景记忆的形成高度依赖于海马体及其周围结构(如内嗅皮层),这些区域负责将不同感官和情境信息整合绑定在一起,形成一个完整的记忆事件 15。损害海马体的疾病(如阿尔茨海默病)会导致情景记忆的显著障碍 16。虽然情景记忆最初依赖海马体,但随着时间的推移,记忆痕迹会逐渐转移到新皮层进行长期巩固 17。健康老年人在情景自传体记忆方面的表现,与颞极的灰质体积有关联 18。情景记忆的检索也涉及复杂的神经回路,包括后扣带皮层、颞中回、颞上回、额下回和角回等 19。

  • 语义记忆(Semantic Memory):语义记忆是对事实、概念、知识和词汇意义的记忆,不涉及特定的个人经历或情境。例如,记住巴黎是法国的首都,或者了解“鸟”的定义。语义记忆被认为是外显记忆中相对稳定的部分,它构成了一个人对世界的普遍认知。神经影像学研究表明,语义记忆主要涉及颞叶前部和新皮层广泛区域,这些区域充当着连接分散在皮层中一般知识的枢纽 16 20。与情景记忆不同,语义记忆在海马体受损的情况下通常能相对保持完整 16。研究也观察到,在某些记忆障碍中,语义记忆和情景记忆的受损模式有所不同,例如,“语义性痴呆”患者主要表现为语义记忆的丧失 16。

内隐记忆(非陈述性记忆)

内隐记忆,又称非陈述性记忆,是指那些不需要有意识回忆,其存在通过行为或绩效变化来体现的记忆。这种记忆的提取通常是无意的,且在很大程度上不受遗忘的影响 14。内隐记忆类型包括程序记忆、启动效应和经典条件反射等。

  • 程序记忆(Procedural Memory):程序记忆是对技能和习惯的记忆,例如骑自行车、打字或演奏乐器。它通常通过重复练习逐步习得,一旦形成就很难忘记。程序记忆的神经基础主要位于基底神经节(特别是纹状体)、小脑和运动皮层 20 21。纹状体可塑性被认为是适应性运动控制和程序记忆的关键神经基础 21。有研究表明,内隐学习能力存在稳定的个体差异,且与智商、工作记忆或外显学习能力无关 22。

  • 启动效应(Priming Effects):启动效应是指先前接触到的刺激(启动刺激)无意识地影响对后续刺激的加工或行为反应的现象 23。例如,在看到“医生”这个词后,人们会更快地认出“护士”这个词。启动效应可以发生在各种感官模态中,例如运动启动(movement-based priming)可以改变后续行为 24。神经机制研究显示,启动效应可能通过对感觉皮层和运动皮层的调节来实现,例如,辛辣食物图片的启动效应可以减轻疼痛感知,这与N2和P2波幅的降低以及感觉运动皮层theta振荡的抑制有关 25。尽管启动效应是内隐记忆的一种形式,但有时其与外显记忆的界限并不完全清晰 14。老年人对负面词汇的内隐记忆选择性降低,表明衰老对内隐记忆中的启动效应有特定影响 26。

总的来说,外显记忆和内隐记忆由不同的神经系统支持,但它们并非完全独立。例如,语言学习中词汇的记忆(属于外显记忆)主要依赖颞叶,而语法等规则性知识(部分属于内隐记忆)则与额叶皮层和基底神经节有关 27。海马体与纹状体之间的相互作用也表明,即使是看似独立的记忆系统,也可能在学习、预测和目标导向行为中协同工作 28。

2. 记忆形成的神经基础与功能网络

2.1 关键脑区的特异性功能定位

记忆的形成和存取并非由单一脑区独立完成,而是依赖于多个脑区协同工作形成的功能网络。不同脑区在记忆过程中承担着特异性的功能,共同构建了复杂的记忆系统。

海马体:记忆编码与巩固的核心

海马体(Hippocampus)在情景记忆的编码和巩固中扮演着至关重要的角色。它是大脑边缘系统的一部分,形似海马,负责将新信息从短期记忆转化为长期记忆 29。具体而言,海马体接收来自内嗅皮层的信息,而内嗅皮层又整合了来自嗅觉皮层、梨状皮层等区域的多感官输入,以及来自海马旁区域(如海马旁回和内嗅皮层)的空间和情境信息 15。海马体通过绑定这些分散的感官和情境特征,形成一个统一的记忆痕迹,即“什么(what)”、“在哪里(where)”和“何时(when)”的事件记忆 15。这种关联性记忆的形成,尤其依赖于海马体与皮层之间的协同作用 30。

然而,海马体对记忆的依赖并非一成不变。新形成的情景记忆最初高度依赖海马体,但随着时间的推移,这些记忆会经历一个“系统巩固”的过程,逐渐变得独立于海马体,并在新皮层中建立起更稳定的表征 3132。这种从海马体到新皮层的记忆转移和重组,使得记忆变得更加概括和抽象,形成语义记忆或图式 3133。海马体的长轴功能分化也在此过程中发挥作用:海马体后部与后部新皮层(如感知和空间表征系统)连接,支持记忆的精细、感知丰富的细节;而海马体前部与前部新皮层(如概念系统)连接,支持记忆的粗略、全局表征,即记忆的要旨 31。

前额叶皮层:工作记忆与执行功能的调控中枢

前额叶皮层(Prefrontal Cortex, PFC)是高级认知功能的关键区域,尤其在工作记忆、认知灵活性和抑制控制等执行功能中发挥核心作用 34。它负责对信息进行目标导向的顶层控制,从而协调全脑的分散过程 34。背外侧前额叶皮层(dorsolateral PFC)与工作记忆的维持、目标导向的注意力、任务切换、规划和解决问题等密切相关 3435。而腹外侧前额叶皮层(ventrolateral PFC)则在抑制和反应选择中发挥作用 34。

前额叶皮层与海马体的相互作用对于记忆的形成和转换至关重要。例如,内侧前额叶皮层(mPFC)在记忆的概括化过程中扮演重要角色,它通过与海马体的连接,支持图式(schema)的形成,即将不同事件中的共同方面编码为概括性的记忆表征 31。前额叶皮层通过调控认知过程来影响记忆表现,例如其功能障碍与工作记忆和执行功能的缺陷密切相关 3435。前额叶皮层的功能障碍与多种神经精神疾病相关,包括精神分裂症、抑郁症和阿尔茨海默病,这些疾病常表现出工作记忆和执行功能的缺陷 3435。

杏仁核:情绪记忆的强化效应

杏仁核(Amydala)是边缘系统中的一个关键核团,在情绪处理和情绪记忆的形成与调节中扮演核心角色 3637。强烈的情绪体验(无论是积极的还是消极的)能够激活杏仁核,并通过其与其他脑区的广泛连接,尤其是与海马体的连接,显著增强记忆的巩固 3236。这种强化效应使得情绪相关的事件更容易被记住,而且记忆内容往往更加鲜明和持久。

杏仁核对记忆的调节机制涉及神经递质和激素的协同作用。去甲肾上腺素(Norepinephrine)和糖皮质激素(Glucocorticoids)是应激反应中释放的两种关键信号分子,它们在杏仁核的作用下共同调节记忆的巩固 323638。去甲肾上腺素通过增强基底外侧杏仁核(basolateral amygdala, BLA)的活动,进而调节海马体与皮层区域的连接,从而提升记忆的准确性 3236。而糖皮质激素则可能通过促进新记忆整合到新皮层网络中,从而导致记忆的概括化 32。杏仁核在创伤后应激障碍(PTSD)等病理状态下,可能出现过度激活,导致情绪记忆的过度巩固和泛化 37。

小脑:程序记忆的参与

小脑(Cerebellum)传统上被认为是运动协调和平衡的控制中心,但越来越多的证据表明,它在多种形式的学习和记忆中也发挥着关键作用,尤其是在程序记忆(如技能学习和习惯形成)以及经典条件反射中 394041。例如,经典眼睑条件反射的记忆痕迹被确定形成并储存在小脑中 39。

小脑通过其复杂的回路,包括与基底神经节、运动皮层等区域的连接,参与运动技能的习得和自动化 4042。研究表明,小脑与大脑皮层之间存在功能连接,例如,小脑与背侧额顶通路存在连接,参与语音处理;与腹侧额颞通路存在连接,参与语义处理 41。这表明小脑不仅限于运动记忆,也可能以更复杂的方式参与认知和语言相关记忆。虽然发育性阅读障碍(dyslexia)通常与大脑皮层功能异常有关,但也有理论提出小脑可能在阅读发展中扮演重要角色 41。有研究显示,阅读障碍成人表现出完好的程序记忆,但在听觉统计学习方面存在障碍 40。

2.2 神经可塑性的支撑作用

记忆的形成和存储在很大程度上依赖于大脑的神经可塑性,即神经系统通过改变其结构和功能来适应经验的能力。这种适应性变化主要体现在突触可塑性、神经发生以及神经网络的动态重组上。

突触可塑性:长时程增强(LTP)与长时程抑制(LTD)

突触可塑性被广泛认为是记忆存储的一种重要细胞机制 43。它主要表现为突触传递效能的持久性改变,其中长时程增强(Long-Term Potentiation, LTP)和长时程抑制(Long-Term Depression, LTD)是两种最受关注的形式。

  • 长时程增强(LTP):LTP是指突触前神经元持续高频刺激导致突触后神经元反应强度长期增强的现象。它被认为是记忆编码和巩固的细胞基础 43。例如,在海马CA1区域,海马CA3神经元向CA1神经元的输入,尤其是当两个脑区中的“记忆细胞”(engram cells)被激活时,其突触连接强度会显著增强,这种结构和功能上的连接增强构成了记忆形成的关键突触关联 44。N-甲基-D-天冬氨酸受体(NMDA受体)在LTP的诱导中扮演核心角色,其激活需要突触前后膜同时去极化,这符合赫布学习定律(“细胞一起发放,连接在一起”)45。LTP的维持涉及突触后膜上α-氨基-3-羟基-5-甲基-4-异恶唑丙酸受体(AMPAR)数量和功能的改变,以及树突棘结构的变化 46。

  • 长时程抑制(LTD):LTD是与LTP相反的现象,指突触传递效能的长期减弱。尽管LTP受到更多关注,但LTD同样在学习和记忆中发挥重要作用,它被认为介导了无关或错误信息的遗忘,从而提高神经网络的计算灵活性 4748。例如,LTD可能通过减少突触后膜AMPAR的数量来实现 46。研究表明,LTD作为一种有效的突触可塑性形式,有助于记忆形成 48。压力等因素可以影响LTP和LTD的平衡,从而影响记忆的形成和巩固 45。

LTP和LTD并非独立的事件,而是动态平衡的一部分。它们共同作用,通过调节突触连接的强度和效率,使得神经回路能够灵活地编码、存储和更新信息。

神经发生:海马齿状回新生神经元对记忆更新的贡献

成人神经发生(Adult Neurogenesis)是指在成年哺乳动物大脑中,特定区域(主要是海马齿状回和侧脑室下区)持续产生新的神经元的过程 49。这些新生的神经元能够整合到现有的神经回路中,并在学习和记忆中发挥关键作用 5051。

海马齿状回的新生神经元被认为对记忆的更新、分离和情景记忆的形成至关重要 52。它们通过以下方式促进记忆功能:

  • 模式分离(Pattern Separation):新生的神经元有助于区分相似但不同的经历,从而减少记忆之间的干扰。例如,在面对两个非常相似的情境时,新生神经元能够帮助大脑形成两个独立的记忆表征,而不是将它们混淆 52。
  • 记忆更新与遗忘:持续的神经发生可能在一定程度上导致旧记忆的“降级”或遗忘,这对于适应新环境和避免信息过载至关重要。研究表明,增加神经发生可以促进成年小鼠的遗忘,而在婴儿期(新生神经元水平较高)减少神经发生则可以减轻遗忘 53。
  • 认知灵活性:新生神经元通过抑制齿状回的整体活动,帮助提高认知灵活性,例如在逆转学习和情绪化情境下的学习 52。

值得注意的是,成人海马神经发生不仅与学习记忆相关,还与情绪调节和应激反应密切相关 4951。神经发生水平的改变与多种神经系统疾病(如阿尔茨海默病)和精神疾病(如抑郁症)的认知缺陷有关 505154。例如,阿尔茨海默病患者的海马神经发生显著下降,这可能与记忆障碍有关 5054。

神经网络重组的动态过程

记忆并非仅仅存储在孤立的突触或神经元中,而是以神经元集合的活动模式或分布式网络的形式存在 43。记忆的形成、巩固和提取涉及大脑中大规模神经网络的动态重组。

  • 记忆痕迹(Engrams)的形成:记忆痕迹被认为是编码特定记忆信息的神经元集合。这些“记忆细胞”分布在大脑的多个区域,通过突触连接形成复杂的回路 44。当一个记忆被激活时,这些记忆细胞会被重新激活,从而“重现”记忆 55。
  • 系统巩固:如前所述,新记忆最初依赖于海马体,然后通过系统巩固过程逐渐转移到新皮层进行长期存储。这个过程涉及海马体和新皮层之间持续的对话和重组,可能在睡眠期间尤其活跃 56。记忆的再激活和转换在这一过程中扮演关键角色,例如,颞叶皮层中的记忆重现和顶叶皮层中的记忆转换共同促进了识别记忆的形成 55。
  • 网络连接的调整:神经可塑性不仅体现在单个突触层面,也体现在更大尺度的神经网络连接模式上。长时程增强和抑制会共同调整神经回路中兴奋性和抑制性连接的平衡,从而优化信息的处理和存储。例如,杏仁核在恐惧学习和表达中扮演关键角色,通过处理威胁信号并引发防御反应来影响情绪相关记忆 57。此外,新的研究发现,下丘脑的某些区域(如乳头体上核)可以调控海马神经发生,并通过影响新生神经元的活性来调节记忆检索和焦虑行为 58。

这些动态过程共同确保了记忆系统的灵活性、效率和持久性,使我们能够持续学习、适应环境并形成丰富的个人经历。

3. 记忆调控的分子与细胞机制

记忆的形成、巩固和提取不仅是神经回路层面活动的结果,更是深层分子和细胞机制相互作用的体现。这些机制包括关键分子信号通路的激活以及表观遗传修饰对基因表达的精细调控,共同确保记忆的稳定存储与动态更新。

3.1 关键分子信号通路

神经元内部存在复杂的分子信号通路,它们在突触可塑性、基因表达调控以及最终的记忆形成过程中发挥着门控、促进和稳定作用。

NMDA受体在记忆编码中的门控作用

N-甲基-D-天冬氨酸受体(NMDA受体,NMDAR)是一种谷氨酸受体,在突触可塑性,特别是长时程增强(LTP)的诱导中扮演着核心的“门控”角色。它的独特之处在于其离子通道在静息状态下被镁离子(Mg2+)堵塞,只有当突触前神经元释放谷氨酸且突触后膜同时发生充分去极化(即Mg2+阻塞被解除)时,NMDAR才能被激活并允许钙离子(Ca2+)内流 59。这种“巧合检测”机制是赫布学习定律(“细胞一起发放,连接在一起”)在分子层面的体现,确保只有当突触前活动与突触后兴奋同时发生时,突触连接才会被有效增强。

Ca2+内流作为第二信使,能够激活多种下游信号通路,如钙/钙调素依赖性蛋白激酶II(CaMKII)和蛋白激酶C(PKC),这些激酶进而磷酸化突触后膜上的α-氨基-3-羟基-5-甲基-4-异恶唑丙酸受体(AMPAR),增加其功能或将其插入到突触后膜中,从而增强突触传递效能,这是LTP的重要表现。

NMDAR的功能异常与多种神经精神疾病相关。例如,阿尔茨海默病(AD)中突触功能障碍是认知衰退的核心驱动因素,NMDAR的异常激活或功能下调均可能导致记忆障碍 59。对甘氨酸转运体1(GlyT1)的基因敲除研究表明,降低GlyT1的表达可以增加海马区NMDAR的功能,从而改善空间记忆的保持 60。这提示,调节NMDAR的活性是记忆增强或干预记忆障碍的潜在靶点。

BDNF对突触可塑性的促进机制

脑源性神经营养因子(Brain-Derived Neurotrophic Factor, BDNF)是神经营养素家族中的重要成员,在哺乳动物大脑中广泛表达,对神经元的发育、存活、分化、突触传递以及突触可塑性(包括LTP)具有显著的调节作用 616263。BDNF主要通过与其高亲和性受体酪氨酸激酶受体B(TrkB)结合发挥作用 6162。TrkB受体激活后,会启动多条下游信号通路,包括Ras/ERK、磷脂酰肌醇3激酶/Akt和磷脂酶C-γ(PLC-γ)通路 61。

BDNF对突触可塑性的促进作用体现在多个层面:

  • 局部蛋白质合成:BDNF能够调节树突中mRNA的运输及其在突触处的翻译,通过影响蛋白质合成的起始和延伸阶段来调控突触蛋白质组,这对于LTP的诱导和维持至关重要 61。这种局部蛋白质合成确保了突触结构和功能的快速适应性变化。
  • 突触结构和功能改变:BDNF能够促进突触的形成和成熟,增加树突棘的数量和大小,这些形态学变化直接支持突触效能的增强和记忆的稳定存储 64。
  • 基因表达调控:除了局部作用,BDNF还能通过影响转录调控,进而长期改变突触蛋白质组,从而支持长时程的突触可塑性 61。

多项研究证实了BDNF在学习记忆中的关键作用。例如,小胶质细胞通过BDNF信号促进学习依赖的突触形成 65。运动通过乳酸介导BDNF的表达,从而促进学习和记忆 66。氨基葡萄糖(Glucosamine)也能通过cAMP/PKA/CREB依赖性途径上调BDNF水平,从而增强认知功能 67。BDNF信号通路的缺陷与亨廷顿病、阿尔茨海默病和抑郁症等多种神经系统疾病的病理发生密切相关 62,因此,操纵BDNF通路被认为是治疗这些疾病的有效方法。

cAMP-PKA-CREB通路在记忆巩固中的基因表达调控

长时程记忆的形成和巩固需要新的蛋白质合成和基因表达,这主要由细胞内信号通路介导。cAMP-PKA-CREB(环磷酸腺苷-蛋白激酶A-cAMP反应元件结合蛋白)通路是其中最为关键的分子通路之一 68。

  • cAMP的产生:神经元的活动可以激活腺苷酸环化酶,催化三磷酸腺苷(ATP)转化为环磷酸腺苷(cAMP)。
  • PKA的激活:cAMP作为第二信使,结合并激活蛋白激酶A(PKA)。
  • CREB的磷酸化:活化的PKA进入细胞核,磷酸化cAMP反应元件结合蛋白(CREB)。CREB是一种转录因子,其磷酸化是启动记忆相关基因表达的关键步骤 6869。磷酸化的CREB能够结合到目标基因启动子区域的cAMP反应元件(CRE)上,促进记忆相关基因(如BDNF、c-fos、Arc等)的转录 68。

CREB在记忆巩固中起着“启动者”的作用。它在记忆形成过程中是不可或缺的,但随着时间的推移,其共激活因子会发生变化,最终CREB本身可能变得不再是记忆维持的必需 68。核钙/钙调素信号传导也通过调节CREB的磷酸化来调控记忆巩固 69。此外,CREB的O-连接N-乙酰氨基葡萄糖(O-GlcNAc)修饰可以动态调节CREB介导的基因表达和记忆形成,通过抑制CREB与CREB调节转录共激活因子(CRTC)的结合,从而抑制CREB依赖的转录 70。

总而言之,NMDAR作为记忆编码的门控,BDNF作为突触可塑性的促进剂,以及cAMP-PKA-CREB通路作为记忆巩固中基因表达的调控核心,共同构成了记忆形成和稳定存储的分子基石。这些分子机制的精细调控,是理解大脑如何将瞬时经验转化为持久记忆的关键。

3.2 表观遗传修饰的调控功能

除了基因组序列本身,表观遗传修饰在基因表达调控中扮演着至关重要的角色,尤其在神经系统中,它们能够响应环境刺激而动态改变,从而影响记忆的形成、巩固和持久性 717273。这些修饰主要包括DNA甲基化、组蛋白乙酰化及其他组蛋白修饰等,它们通过改变染色质结构的可及性,精细地调控记忆相关基因(如Arc、Fos)的表达 7174。

DNA甲基化

DNA甲基化是指在DNA分子上添加甲基基团的过程,主要发生在CpG二核苷酸的胞嘧啶残基上 7576。这种修饰通常与基因转录的抑制相关,因为它能影响转录因子与DNA的结合,或通过招募甲基化结合蛋白和组蛋白去乙酰化酶(HDACs)来导致染色质的致密化 7376。

在记忆形成过程中,DNA甲基化并非一成不变,而是表现出动态变化。研究发现,在学习和记忆编码过程中,特定基因位点的DNA甲基化状态会发生改变,这些变化被认为是记忆持久性的基础 7276。例如,在海马中,对记忆相关基因的DNA甲基化和去甲基化过程在学习后是可逆且动态的 76。尽管一些研究曾提出DNA甲基化可能导致Arc启动子甲基化增加并降低其表达,从而解释记忆缺陷 77,但整体来看,DNA甲基化在神经元中呈现出复杂的动态性,其作用远非简单的基因沉默。它能够通过重塑基因组景观,参与记忆的编码和提取 76。阿尔茨海默病(AD)等神经退行性疾病中,DNA甲基化的失调被认为是导致记忆丧失和认知能力下降的关键因素 7178。

组蛋白乙酰化与去乙酰化

组蛋白乙酰化是另一种重要的表观遗传修饰,它通过组蛋白乙酰转移酶(HATs)在组蛋白赖氨酸残基上添加乙酰基,或通过组蛋白去乙酰化酶(HDACs)移除乙酰基,从而改变染色质的开放或紧密程度 7379。通常,组蛋白乙酰化会使染色质结构变得松散,从而促进基因转录;而组蛋白去乙酰化则导致染色质紧密,抑制基因表达 79。

  • 对记忆相关基因表达的调控:

    • Arc/Arg3.1:Arc(Activity-regulated cytoskeleton-associated protein,又称Arg3.1)是一种活动依赖性即早基因(immediate-early gene),对记忆巩固至关重要 7780。其表达受表观遗传机制的严格调控。细胞内Arc蛋白存在于突触后细胞质中,促进AMPA受体内吞和细胞骨架重塑;而核内Arc则与基因转录的表观遗传控制有关 80。研究表明,记忆编码会导致某些基因(如c-Fos)的启动子区域组蛋白H3的磷酸化水平显著升高,从而促进其转录,支持突触可塑性 81。
    • c-Fos:与Arc类似,c-Fos也是一种即早基因,其表达水平在学习和记忆过程中迅速上升,被认为是神经元激活的标志,并参与调节下游记忆相关基因的表达 81。运动可以通过增强齿状回神经元的组蛋白H3磷酸化和c-Fos诱导,从而改善对心理压力的认知反应 81。
  • 乙酰辅酶A(Acetyl-CoA)的关键作用:组蛋白乙酰化过程的底物是乙酰辅酶A(acetyl-CoA),因此细胞内的代谢状态与组蛋白乙酰化水平密切相关 738283。研究发现,乙酰辅酶A合成酶2(ACSS2)直接调节神经元中的组蛋白乙酰化和哺乳动物的空间记忆 82。海马中ACSS2的活性降低会导致核内乙酰辅酶A水平、组蛋白乙酰化水平以及记忆相关基因的响应性表达下降,进而损害长期空间记忆的形成 8283。针对ACSS2的抑制剂能够减少恐惧记忆的形成,提示代谢和表观遗传的连接在记忆调控中的重要性 83。此外,星形胶质细胞通过ApoE蛋白影响神经元的胆固醇代谢和组蛋白乙酰化,进而影响H3K27ac在多个即早基因启动子处的富集,最终增强记忆巩固 84。

  • 组蛋白去乙酰化酶(HDACs)的负向调控:HDACs通过移除乙酰基来抑制基因表达,其活性平衡对记忆功能至关重要。HDAC2被发现是记忆形成和认知功能的重要负向调节因子 8586。例如,雌二醇能够通过降低HDAC2和HDAC3蛋白水平,增加海马中组蛋白H3乙酰化,进而增强中年雌性小鼠的记忆巩固 86。研究显示,HDACs在记忆巩固和消退过程中发挥作用 85,表明HDACs在神经退行性疾病中可能参与认知能力的下降 71。

表观遗传修饰的动态性与记忆持久性

记忆并非静态的,表观遗传修饰的动态改变是记忆持久性与可变性的基础。记忆编码可以导致一种“表观遗传启动”事件,表现为增强子可及性的增加,即使此时还没有相应的转录变化 7487。在记忆巩固阶段,染色质会发生大规模的空间重组和启动子-增强子相互作用 74。当记忆被重新激活时,印记神经元会利用新的远程相互作用,使得被“启动”的增强子与各自的启动子接触,从而上调与突触局部蛋白翻译相关的基因 74。这种染色质可塑性甚至可以在记忆编码前就预先决定神经元被招募进记忆痕迹集合的资格,显示了表观遗传状态对信息编码能力的关键影响 87。

总而言之,DNA甲基化和组蛋白修饰,特别是乙酰化,通过动态调控记忆相关基因的表达,精细地控制着记忆的形成、巩固和持久性 71。这些表观遗传机制的紊乱与多种认知障碍和神经精神疾病相关,也为开发新的治疗策略提供了靶点 717278。

4. 记忆动态过程的时间维度解析

记忆的形成是一个复杂的多阶段过程,涉及从信息输入到最终存储和提取的动态转化。这个过程可以被分解为编码、巩固和提取三个主要阶段,每个阶段都有其独特的神经生物学特征和功能。

4.1 编码阶段:信息的初步整合

记忆编码是信息进入记忆系统的第一步,它将外界刺激转化为大脑能够存储和处理的神经表征。这是一个多感官信息初步整合、选择性注意以及不同脑区协同作用的关键阶段。

多感官信息向神经表征的转化

我们对世界的感知是多模态的,视觉、听觉、触觉、嗅觉和味觉等感官信息同时涌入大脑。在记忆编码阶段,这些分散的感官输入需要被整合,并转化为统一的神经表征,以便于后续的存储和提取。这种多感官整合(multisensory integration)是一个复杂的过程,它发生在从脑干到皮层的多个层次上,旨在形成一个连贯的、有意义的对外部世界的感知 88。例如,当看到一个物体并听到它的声音时,大脑会将这两种感官信息结合起来,形成对该物体更全面的记忆。多感官整合不仅能提高感知的准确性和速度,还能影响记忆编码的效率。研究表明,多感官信息的整合能力会随着年龄的增长而变化,老年人可能表现出增强的多感官整合效应 89。

多感官信息向神经表征的转化涉及多个脑区的协同工作。例如,海马旁回(Parahippocampal Region)和内嗅皮层(Entorhinal Cortex)在接收来自不同皮层区域(如视皮层、听皮层)的多模态信息后,将其传递给海马体 15。海马体则负责将这些分散的特征(如“什么”、“哪里”、“何时”)绑定在一起,形成一个统一的情景记忆表征 15。这个绑定过程是记忆编码的核心,它确保了我们对一个事件的记忆是完整且关联的。

注意机制对编码效率的影响

注意是记忆编码的“门户”,它决定了哪些信息能够进入记忆系统。只有被注意到的信息才能被有效地编码,进而形成持久的记忆。注意机制对记忆编码效率的影响体现在多个层面:

  • 选择性注意(Selective Attention):选择性注意允许我们专注于特定信息,同时抑制无关的干扰。例如,在嘈杂的环境中,我们仍然能够专注于与朋友的对话。这种选择性注意能力直接影响到记忆编码的质量。研究表明,在声音序列编码过程中,选择性注意与工作记忆之间存在共享的认知资源 90。分散性注意(Divided Attention, DA)会导致记忆编码效率显著下降,无论是在编码阶段还是在提取阶段,分散性注意都会干扰情绪增强记忆的效果 91。甚至在编码和检索时的分散性注意力对多维源记忆的效应是不同的,编码时的分散性注意力影响更大 92。

  • 持续性注意(Sustained Attention):持续性注意是指长时间维持对某项任务或刺激的专注能力。持续性注意的波动会影响长期记忆编码的精确性。例如,研究发现,持续性注意和空间注意对长期记忆编码有独立而独特的影响,两者共同预测记忆表现 93。

从神经机制上看,注意力与前额叶皮层、顶叶皮层以及丘脑等脑区的功能密切相关。前额叶皮层在引导注意、维持信息和执行功能方面发挥关键作用,从而调控记忆编码的效率。例如,背外侧前额叶皮层的功能状态直接影响工作记忆的表现,进而影响后续的长期记忆编码。

不同脑区(如海马与皮层)的协同编码模式

记忆编码并非孤立地发生在一个脑区,而是海马体与新皮层以及其他相关脑区之间协同编码的结果。

  • 海马体与皮层的早期协同:在记忆编码的初始阶段,海马体接收来自各种皮层区域(如内嗅皮层、海马旁皮层、梨状皮层)的输入,这些区域已经对多感官信息进行了初步处理和表征 15。海马体将这些分散的特征(如“物体”、“位置”、“时间”)进行绑定,形成一个初步的、情境依赖的记忆痕迹。同时,新皮层也在并行地参与信息的初步处理和表征,为海马体的绑定提供输入。

  • “记忆印迹”(Engram)的形成:近期研究强调了“记忆印迹”(memory engram)的概念,认为记忆编码涉及在特定神经元集合中形成可识别的神经表征 94。这些印迹神经元(engram neurons)在记忆编码时被激活,并在后续的巩固和提取阶段优先参与。例如,海马齿状回中发育不同阶段产生的神经元集合(早期生成和晚期生成)可以并行编码多个记忆痕迹,并在编码后表现出不同的再激活轨迹,从而影响记忆的持久性和可塑性 95。

  • 注意-记忆网络的协同:注意力网络(主要涉及额顶叶区域)与记忆网络(主要涉及海马和内侧颞叶)之间存在紧密的相互作用。在编码过程中,注意力网络会调控感觉信息加工的优先级,确保重要信息被高效地传递到记忆网络进行编码。例如,当一个刺激具有高度显著性或与预期目标相关时,注意力系统会增强其神经表征,使其更容易被记忆。

综上所述,记忆的编码阶段是一个高度动态和协同的过程,它涉及多感官信息的整合、注意的选择性聚焦以及不同脑区(特别是海马体和新皮层)的同步工作,最终将瞬时经验转化为稳定的神经表征,为后续的记忆巩固和提取奠定基础。

4.2 巩固阶段:从脆弱到稳定的转化

记忆编码后的信息在短期内是脆弱和不稳定的,容易受到干扰而遗忘。记忆巩固(Memory Consolidation)是一个将这些脆弱记忆转化为持久、稳定长期记忆的关键过程,它涉及突触层面的强化和整个神经系统层面的重组。这一阶段通常需要数小时、数天甚至更长时间才能完成,并可分为突触巩固和系统巩固。

系统巩固:海马依赖向皮层独立的转移

系统巩固(Systems Consolidation)是指记忆痕迹从最初依赖海马体逐渐转移并整合到新皮层(neocortex)的广泛网络中,最终实现记忆的独立存储。这个过程使得长期记忆不再需要海马体才能被提取,从而解释了为什么海马体受损的患者(如H.M.)无法形成新的情景记忆,但仍然能够回忆起受伤前形成的旧记忆 96。

  • 海马体与皮层的交互作用:系统巩固被认为是海马体与新皮层之间持续对话的结果。在记忆编码后,海马体中的记忆痕迹会经历重复的再激活(Reactivation)和重放(Replay)过程,尤其是在慢波睡眠(Slow-Wave Sleep, SWS)期间 97。这些再激活信号被认为是驱动记忆从海马体向新皮层转移的关键机制。通过这种重复的海马-皮层交互,记忆的表征在新皮层中逐渐建立和强化,最终形成脱离海马体依赖的稳定连接 9698。
  • 记忆的抽象与概括:在系统巩固过程中,记忆并非简单地从一个脑区复制到另一个脑区,而是经历一个质的转化。新皮层在接收海马体传来的记忆信息时,可能会对其进行概括、抽象和整合,使其与已有的知识网络更好地融合 98。这有助于形成更加灵活、概括性的记忆,即从情景记忆向语义记忆的转化。例如,对一个反复经历的事件,其细节可能会随时间淡化,而核心的概括性信息则会被保留和强化。
  • 快速皮层可塑性:尽管传统理论认为系统巩固是一个缓慢的过程,但有研究指出,在学习时也可能发生快速的皮层痕迹形成,这些痕迹可以在数小时或数天内独立于海马体支持记忆 99。这种快速皮层学习可能发生在与先验知识相关、涉及主动决策或反复提取的情况下 99。这表明,系统巩固可能是一个更为动态和灵活的过程,取决于记忆的性质和学习条件。

突触巩固:蛋白质合成依赖的突触强化

突触巩固(Synaptic Consolidation)是指在神经元层面发生的,通过基因表达和新蛋白质合成来强化突触连接,从而实现短期记忆向长期记忆转化的过程。这一过程通常在记忆编码后的数分钟到数小时内完成。

  • 新蛋白质合成的必需性:大量证据表明,新蛋白质合成是长期记忆巩固的必要条件 100101102。若在学习后立即给予蛋白质合成抑制剂(如茴香霉素),动物就无法形成长期的记忆,但短期记忆不受影响 100103。这说明新蛋白质是维持突触结构和功能长期改变的基础。这些新蛋白质可能包括突触受体、结构蛋白、酶以及调节基因表达的转录因子等。
  • 分子机制:记忆编码过程中诱导的细胞内信号通路(如cAMP-PKA-CREB通路和BDNF信号通路)最终会激活基因转录和翻译,从而合成新的蛋白质 101102。这些新蛋白质被运输到突触位点,参与突触的形态学重塑(如树突棘的增大和数量增加)和功能增强,从而稳定最初由LTP诱导的突触变化 102103。
  • 记忆印迹细胞的稳定性:研究发现,在记忆巩固过程中,记忆印迹细胞(engram cells)的突触强度和树突棘密度会特异性地增加 103。即使在蛋白质合成抑制剂导致失忆的情况下,这些印迹细胞的特异性连接仍然保留,并且通过光遗传学激活这些细胞可以恢复记忆 103。这表明,印迹细胞特异的连接模式可能对记忆信息的存储至关重要,而强化后的突触则在记忆提取中发挥关键作用 103。此外,社会传递的食物偏好长期记忆的巩固需要外侧杏仁核(COApm)中依赖蛋白质合成的机制,这进一步证实了蛋白质合成在长期记忆巩固中的核心地位 104。

睡眠在巩固过程中的优化作用

睡眠被广泛认为是促进记忆巩固的关键生理状态 9798。在睡眠期间,大脑的活动模式与清醒状态不同,为记忆的系统巩固提供了有利条件。

  • 慢波睡眠(SWS)的作用:慢波睡眠,特别是慢波活动(slow oscillations)、纺锤波(sleep spindles)和海马尖波涟漪(hippocampal sharp-wave ripples)的协同作用,被认为是记忆系统巩固的主要驱动力 9798。在SWS期间,海马体中与新近学习事件相关的神经元活动模式会重放(reactivate) 9798。这些海马活动与新皮层的慢波和纺锤波同步,促进了记忆信息从海马体向新皮层的有效转移和整合 98。这种再激活过程有助于将脆弱的、海马依赖的记忆转化为稳定、新皮层依赖的记忆 9697。
  • 快速眼动睡眠(REM Sleep)的作用:虽然SWS在海马依赖记忆的巩固中作用显著,但REM睡眠也被认为在记忆巩固中扮演特定角色,尤其是在情绪记忆和程序记忆的稳定化方面 97105。REM睡眠可能通过稳定SWS期间转化的记忆来进一步巩固它们 97。
  • 靶向记忆再激活(Targeted Memory Reactivation, TMR):利用睡眠期间的记忆巩固机制,研究者开发了靶向记忆再激活(TMR)技术。通过在睡眠期间呈现与学习材料相关的感官线索(如声音或气味),可以特异性地增强特定记忆的巩固效果 106。元分析显示,TMR在非快速眼动睡眠(NREM)的第二阶段和慢波睡眠期间尤其有效,能够显著提高记忆表现,支持了睡眠在记忆巩固中的积极作用 106。TMR技术不仅为深入理解睡眠与记忆的神经机制提供了工具,也为潜在的记忆增强或干预提供了新的途径。

总而言之,记忆巩固是一个多层次、多时间尺度的复杂过程,包括突触层面的新蛋白质合成和系统层面的记忆表征转移。睡眠,尤其是慢波睡眠,通过神经回路的重放和同步活动,为这一过程提供了优化的环境,确保了记忆的持久性和稳定性。

4.3 提取阶段:记忆的再激活与重构

记忆提取是将已存储的信息从记忆系统中重新取出的过程。这个过程并非简单地回放原有信息,而是一个主动的、动态的、有时甚至是具有重构性的过程。记忆提取的成功与否依赖于有效的提取线索,并受到内在状态(如情绪)和记忆自身特性(如再巩固)的影响。

记忆线索触发的神经回路复现机制

记忆提取的核心在于“线索依赖性提取”(cue-dependent retrieval)。当一个与编码时情境相似或相关的线索出现时,它能够激活存储该记忆的特定神经回路,从而实现记忆的再激活 107。这个过程并非仅仅是神经元的简单复活,而是记忆痕迹(engram)的神经元集合在特定线索刺激下的动态复现 107。

  • 印迹(Engram)的再激活:现代神经科学研究表明,记忆是以神经元印迹的形式存储的,即由一组在学习时特异性激活的神经元组成。当记忆被提取时,这些印迹神经元会被再次激活,它们的活动模式与编码时的模式高度相似 107。例如,小鼠的研究发现,当检索条件与训练条件高度匹配时,与记忆印迹重叠的检索线索能够最大限度地激活印迹神经元并诱导记忆回忆 107。这为“编码特异性假说”提供了生物学基础,即记忆在与编码时相似的条件下最容易被回忆 107。
  • 回路重现(Reinstatement):记忆提取不仅仅是单个神经元的激活,而是整个神经回路活动模式的重现。当线索呈现时,它会触发与原始记忆编码相关的神经元网络活动。例如,功能磁共振成像(fMRI)研究表明,成功记忆检索与海马体活动相关 108。这种神经回路的复现机制是成功回忆的关键。

记忆提取的精确性与易变性(如再巩固理论)

记忆提取并非总是完美和精确的,它可能受到多种因素的影响而表现出易变性,甚至发生重构。

  • 记忆再巩固(Reconsolidation):长期以来,人们认为一旦记忆巩固完成,它就会变得稳定和不易改变。然而,“记忆再巩固”理论挑战了这一观点。该理论认为,当一个已巩固的记忆被重新激活时,它会短暂地回到一种不稳定的“易变态”(labile state) 109110。在这个短暂的窗口期内,记忆可以被新的信息更新、修改、增强或削弱 109110111。例如,研究表明,通过在记忆重新激活后给予遗忘剂,可以有效削弱或消除不适应性记忆(如恐惧记忆) 109110。这种易变性为记忆的适应性更新提供了机制,但也意味着记忆在每次提取时都有可能被修改。最近的研究甚至指出,记忆的再巩固可能涉及“行为标记”(behavioral tagging)过程,即记忆激活会设置一个神经标签,使得蛋白质合成在记忆重新稳定化中发挥作用,并能够与其他事件绑定 112。
  • 记忆重构(Reconstruction):记忆提取并非简单的信息读取,而是一个动态的重构过程。我们回忆的往往不是事件的精确副本,而是基于现有知识、期望和当前情境对过去事件的重新构建。这种重构性使得记忆在一定程度上具有适应性,能够根据当前需求进行更新,但也可能导致记忆失真或错误记忆的产生 113。例如,在阿尔茨海默病患者中,由于认知控制和抑制能力的下降,他们更容易产生虚假记忆,尤其是在信息具有高情绪负荷、生动性或熟悉度时 113。
  • 遗忘(Forgetting):遗忘是记忆系统的固有特征,它并非总是消极的。选择性遗忘或“提取诱导遗忘”(Retrieval-induced forgetting)是指,当选择性地练习回忆某个记忆时,与此相关的其他未被回忆的记忆反而会被抑制或遗忘 114。这种机制有助于大脑管理和优化记忆内容,避免信息过载,并确保对当前目标相关信息的优先访问。情绪记忆也同样会受到这种提取诱导遗忘的影响,表明即使是强烈的情绪记忆也具有可塑性 114。

情绪状态对提取效率的调节

情绪对记忆提取具有显著的调节作用,它可以增强或干扰记忆的回忆过程 115。

  • 情绪增强记忆提取:强烈的情绪(无论是积极的还是消极的)通常能够增强记忆的提取。情绪事件往往比中性事件更容易被频繁和生动地回忆 115。这是因为情绪可以激活杏仁核等情绪相关脑区,这些区域通过与海马体和前额叶皮层的连接,影响记忆的巩固和提取 115116。例如,在记忆检索过程中,正性情绪和负性情绪都可以提高识别表现 116。此外,成功的记忆提取本身也被认为是具有内在奖励性的,能够激活与奖励相关的脑区活动,这种积极反馈可能会促进未来的检索尝试并增强对已检索事件的记忆 117。
  • 情绪影响检索线索和状态依赖性记忆:情绪状态也可以作为一种内部线索,影响记忆的提取。当提取时的情绪状态与编码时的情绪状态匹配时,记忆提取效率更高,这被称为“情绪状态依赖性记忆”(mood-state dependent memory) 118。例如,研究发现,小鼠在特定内部状态下(如乳头体抑制状态)进行记忆训练,只有在该状态恢复时才能成功提取记忆 118。此外,情绪唤起可能会改变对记忆细节的精确回忆,特别是对于那些与情绪核心事件不直接相关的细节 115。
  • 非自愿记忆提取(Involuntary Retrieval):情绪还可以通过非自愿记忆提取的形式影响回忆。普鲁斯特(Proust)的作品形象地描绘了感官线索(如气味)如何触发强烈而生动的非自愿记忆。这种回忆通常不涉及意识努力,而是由特定情绪或感官体验引发,并被认为比自愿回忆更加生动 119。

总而言之,记忆提取是一个复杂的动态过程,它依赖于有效的线索激活神经回路的复现。同时,记忆提取并非一成不变,再巩固机制允许记忆在提取时被更新和重构,而情绪状态则可以显著调节提取的效率和性质。理解这些机制对于揭示记忆的本质以及干预记忆障碍至关重要。

5. 记忆异常的病理机制与干预策略

记忆功能是人类认知活动的核心,然而,多种病理状况可能导致记忆障碍,严重影响患者的生活质量。理解这些记忆异常的神经生物学机制,是开发有效干预策略的关键。本节将探讨几种典型的记忆障碍模型,并介绍当前记忆干预技术的应用进展。

5.1 记忆障碍的典型病理模型

记忆障碍并非单一疾病,而是多种病因导致的结果,其表现形式和潜在机制各异。本节将选取阿尔茨海默病、创伤后应激障碍(PTSD)和遗忘症作为典型案例,深入解析病理状态下记忆机制的破坏模式。

阿尔茨海默病(AD):海马萎缩与β-淀粉样蛋白沉积

阿尔茨海默病(Alzheimer's Disease, AD)是最常见的痴呆症类型,其核心特征是进行性记忆丧失和认知功能下降。AD的病理学标志物主要包括细胞外β-淀粉样蛋白(Aβ)斑块的沉积和神经细胞内过度磷酸化的tau蛋白缠结 。这些病理改变首先影响海马体和内嗅皮层等对记忆至关重要的脑区,导致神经元功能障碍和死亡,进而引发广泛的脑萎缩。

  • Aβ沉积与突触功能障碍:Aβ是由淀粉样前体蛋白(APP)异常剪切产生的,Aβ单体聚合形成寡聚体、原纤维,最终形成不溶性淀粉样斑块。Aβ寡聚体被认为是AD早期突触功能障碍的主要原因。它们能够干扰突触可塑性(LTP和LTD),抑制突触传递,甚至导致突触丢失,从而直接损害记忆编码和巩固功能 。Aβ诱导的神经毒性还可能通过增加星形胶质细胞的GABA释放来抑制齿状回的神经元活动,从而损害记忆功能 120。针对Aβ斑块的清除或其毒性的中和,是目前AD药物研发的热点方向。例如,细胞外基质(ECM)重塑被发现可以通过增强星形胶质细胞的自噬-溶酶体途径来介导Aβ清除,从而改善AD模型小鼠的短期记忆丧失 121。
  • tau蛋白缠结与神经元变性:tau蛋白是一种微管相关蛋白,在正常情况下参与微管的稳定。然而,在AD中,tau蛋白异常磷酸化并聚集形成神经原纤维缠结(neurofibrillary tangles, NFTs),导致微管结构破坏,轴突运输受损,最终引起神经元死亡。tau病理通常从内嗅皮层开始,逐渐扩散到海马体和新皮层,其扩散模式与认知功能障碍的进展高度相关。
  • 海马萎缩与记忆丧失:海马体是情景记忆形成和巩固的关键脑区,也是AD最早受累的区域之一。AD患者的海马体萎缩是其记忆障碍最显著的神经影像学特征。这种萎缩直接导致新信息学习能力受损和近期记忆的遗忘,是AD核心临床症状的神经基础。此外,AD还伴随着海马神经发生(成年哺乳动物大脑中新神经元的产生)的急剧下降,而海马神经发生被认为是学习和记忆更新的重要机制 122。恢复或增强海马神经发生被视为改善AD认知缺陷的潜在治疗靶点 122。
  • 多因素病理机制:AD是一个多因素疾病,除了Aβ和tau病理,还涉及慢性炎症、氧化应激、胰岛素抵抗、血管功能障碍、睡眠障碍和肠道菌群失衡等多种机制 123。例如,Angelica polysaccharide被发现可以通过激活BDNF/TrkB/CREB通路来改善AD大鼠的记忆障碍,这提示了多种分子通路在AD病理中的交织作用 124。RTN3蛋白的异常聚集也被发现与社会隔离引起的AD小鼠记忆衰退和tau病理有关 125。因此,多靶点、多模式的干预策略,可能比单一靶点药物更为有效 123。

创伤后应激障碍(PTSD):情绪记忆过度巩固

创伤后应激障碍(Post-Traumatic Stress Disorder, PTSD)是一种在经历或目睹极端创伤事件后出现的精神障碍。其核心症状包括创伤事件的反复闯入性记忆(如闪回、噩梦),对与创伤相关线索的强烈回避,负性情绪和认知改变,以及警觉性增高。PTSD患者的记忆障碍主要表现为创伤记忆的过度巩固和泛化,同时伴随着对情境细节记忆的缺陷 126。

  • 过度巩固与再体验:在PTSD中,创伤事件的情绪和感官方面被“特权化”地记忆,表现为极其生动和痛苦的“再体验”症状,仿佛创伤事件再次发生 126127。这种过度巩固被认为与杏仁核的过度激活有关。杏仁核在情绪记忆的形成和巩固中扮演核心角色,在创伤应激下,其活动异常增强,导致恐惧记忆被强化并难以抑制。
  • 情境记忆缺陷与泛化:与强烈情绪记忆的过度巩固相反,PTSD患者往往对创伤事件的情境细节(如时间、地点)记忆模糊或碎片化 127。这种情境记忆与杏仁核-海马体回路功能障碍有关。海马体负责整合情境信息,但创伤应激可能抑制海马体的正常功能,导致创伤记忆缺乏情境信息,从而更容易泛化到无关的情境中,引发不适当的恐惧和警觉反应。
  • 记忆再巩固的异常:尽管再巩固理论提示记忆可以在重新激活后被修改,但在PTSD中,这种适应性修改机制可能受损,导致创伤记忆难以被正常地“更新”或削弱 126。然而,对再巩固机制的深入理解也为PTSD的治疗提供了新思路,例如,在记忆再激活后使用β-受体阻滞剂普萘洛尔可以阻断创伤记忆的重新巩固,从而削弱其情绪强度 126。

遗忘症:记忆编码或提取的障碍

遗忘症(Amnesia)是指由于脑损伤、疾病或心理因素导致的记忆功能障碍,通常表现为学习新信息困难(顺行性遗忘)或无法回忆过去事件(逆行性遗忘) 128。遗忘症的类型和程度取决于受损脑区。

  • 顺行性遗忘症:患者无法形成新的长期记忆,但能回忆损伤前的事件。这通常是由于内侧颞叶(特别是海马体)或间脑(如乳头体、丘脑前核)的损伤引起。著名的H.M.患者因切除了双侧海马体而患有严重的顺行性遗忘症,但他仍能学习新的运动技能(内隐记忆),这证实了海马体在陈述性记忆形成中的核心作用。
  • 逆行性遗忘症:患者无法回忆脑损伤之前发生的部分或全部事件。这可能涉及广泛的大脑皮层损伤,或者在某些情况下,是由心理创伤(分离性遗忘症)引起,后者主要表现为对自传体情景记忆的缺失,而其他认知功能相对完整 129。
  • 病理机制:遗忘症的病理机制多种多样。脑外伤、中风、脑炎(如抗NMDA受体脑炎 130)、酒精滥用(科尔萨科夫综合征)以及某些神经退行性疾病都可能导致遗忘症。例如,麻醉诱导的遗忘可能与大脑皮层后部的功能连接中断和信息整合能力丧失有关 131。对遗忘症的理解加深了对记忆系统模块化和并行处理的认识,即不同类型的记忆由不同的脑区和通路支持。

5.2 记忆干预技术的应用进展

针对记忆障碍的病理机制,研究者开发了多种干预技术,旨在修复、调控或增强记忆功能。这些技术涵盖了药物干预、神经调控和认知训练等不同层面。

药物干预:NMDA受体调节剂、BDNF增强剂

药物干预主要通过靶向神经递质系统、信号通路或病理蛋白来改善记忆功能。

  • NMDA受体调节剂:由于NMDA受体在突触可塑性和记忆编码中的核心作用,其调节剂一直是记忆增强药物的研发热点。例如,阿尔茨海默病药物美金刚(Memantine)作为一种NMDAR拮抗剂,可以阻断持续性的、异常的NMDAR激活,从而减少兴奋性毒性,尽管其对记忆改善作用有限。一些研究探索了增加NMDAR功能的方法,例如,通过调节甘氨酸转运体1(GlyT1)来增加突触间甘氨酸浓度,从而增强NMDAR的活性,从而改善记忆功能。此外,谷氨酸能药物,尤其是NMDAR调节剂,被认为是改善记忆障碍和治疗神经精神疾病的潜在方向。
  • BDNF增强剂:BDNF是神经元存活、生长和突触可塑性的关键因子。BDNF水平下降与阿尔茨海默病、抑郁症等多种神经疾病的记忆障碍相关。因此,通过药物手段上调BDNF表达或增强BDNF/TrkB信号通路活性,是潜在的治疗策略。例如,有研究表明,淫羊藿多糖(Angelica polysaccharide)能通过激活BDNF/TrkB/CREB通路改善AD大鼠的记忆障碍 124。一些天然分子,如白藜芦醇、槲皮素等,被发现能通过调节SIRT1(一种与神经保护和长寿相关的蛋白)来间接影响BDNF通路,从而具有抗AD潜力 132。此外,运动和一些营养补充剂(如葡萄糖胺)也被发现能增加BDNF水平,对认知功能产生积极影响。
  • 磷酸二酯酶5(PDE5)抑制剂:PDE5抑制剂,如西地那非(伟哥),通过抑制cGMP降解酶PDE5,增加细胞内cGMP水平,进而激活cGMP/PKG/CREB信号通路。这条通路与突触可塑性和记忆形成密切相关 133。研究表明,PDE5抑制剂在动物模型中能够改善学习和记忆功能,并已在AD的临床试验中进行评估,这提示了其作为认知增强剂的潜力,特别是在改善血管性认知障碍方面 133。

神经调控:经颅磁刺激(TMS)、深部脑刺激(DBS)

神经调控技术通过直接或间接调节大脑活动来改善记忆功能。

  • 经颅磁刺激(Transcranial Magnetic Stimulation, TMS):TMS是一种非侵入性技术,通过在头皮上产生变化的磁场来诱导大脑皮层神经元的电活动。重复经颅磁刺激(rTMS)可以通过改变皮层兴奋性来调节神经回路。在记忆干预方面,rTMS被广泛研究用于治疗轻度认知障碍(MCI)和AD。研究表明,高频rTMS刺激左背外侧前额叶皮层或低频rTMS刺激右背外侧前额叶皮层可以显著改善记忆功能 134。针对AD患者,刺激楔前叶(precuneus)的rTMS被发现能选择性改善情景记忆,并伴随楔前叶神经活动增强及默认模式网络(DMN)内连接的改变 135。对于中风后记忆障碍,rTMS也显示出改善记忆功能、整体认知和日常生活活动能力的潜力 136。
  • 深部脑刺激(Deep Brain Stimulation, DBS):DBS是一种侵入性技术,通过植入电极向特定脑区发送电脉冲。虽然DBS主要用于治疗帕金森病等运动障碍,但其在记忆障碍中的应用也正在探索中。例如,对记忆相关脑区(如内侧颞叶或穹窿)进行DBS,被尝试用于治疗某些严重遗忘症或早期AD患者,以期改善记忆功能。DBS的机制可能涉及调节海马-皮层回路的同步性,促进记忆巩固和提取。

认知训练:记忆策略与脑力锻炼

认知训练通过一系列结构化的练习来改善特定认知功能,包括记忆力。

  • 记忆策略训练:这包括教导患者使用助记符(如联想、定位法、缩写)来编码和提取信息。例如,老年人通过学习视觉联想等策略可以有效提高记忆力。
  • 计算机化认知训练:利用计算机程序进行记忆练习,如工作记忆训练、注意力训练等。这些程序通常具有适应性难度,可以根据用户的表现进行调整。有证据表明,多域认知训练可以改善MCI患者的认知功能。
  • 结合生活方式干预:越来越多的证据表明,认知训练结合健康生活方式(如体育锻炼、健康饮食、充足睡眠、社交活动)的综合性干预,对延缓认知衰退和改善记忆障碍具有更显著的效果 123。例如,体育锻炼可以增加BDNF水平、促进海马神经发生,从而改善记忆功能。社会隔离被发现与AD小鼠的记忆衰退和tau病理有关,提示社交活动的重要性 125。
  • 靶向记忆再激活(TMR)与行为疗法:TMR技术除了在睡眠中巩固记忆外,也在治疗创伤后应激障碍(PTSD)中展现潜力。例如,在眼动脱敏与再加工疗法(EMDR)后,在睡眠中应用TMR,通过呈现与创伤记忆相关的提示音,可以增强治疗效果,并减少患者的创伤再体验和回避症状 137。这表明通过行为干预结合神经科学原理,可以有效地修改和重塑病理性记忆。

综上所述,记忆障碍是多种病理机制交织的结果。目前的干预策略从分子、细胞、回路和行为层面多管齐下,旨在恢复或增强受损的记忆功能。随着对记忆机制理解的深入和新技术的发展,未来有望开发出更精准、更有效的记忆障碍治疗方案。

6. 记忆研究的前沿技术与未来方向

记忆研究的飞速发展得益于新兴技术的不断涌现,这些技术极大地提升了我们对记忆神经机制的理解。从宏观的脑网络活动到微观的神经元放电模式,再到细胞内分子信号的动态变化,多层次的观察和操纵手段正逐步揭示记忆的奥秘。

6.1 多模态神经成像技术的突破

多模态神经成像技术是指结合不同成像模态的优势,以提供更全面、更精确的脑功能和结构信息。这些技术的进步,尤其是高分辨率功能磁共振成像(fMRI)、钙成像、光遗传学以及脑机接口(BCI)的结合应用,正在深刻改变记忆研究的格局,使得对记忆网络动态追踪和记忆解码成为可能。

高分辨率fMRI:追踪记忆网络动态

功能磁共振成像(fMRI)通过检测血氧水平依赖(BOLD)信号来间接反映神经元活动,是研究人类大脑功能网络的重要工具。近年来,高分辨率fMRI的出现,使得研究者能够以更高的空间精度观测记忆相关的脑区活动,甚至区分不同海马亚区的活动模式。这对于理解海马体内部以及海马体与新皮层之间在记忆编码、巩固和提取过程中的动态交互至关重要。

例如,高分辨率fMRI已被用于揭示皮质醇如何通过增强海马亚区之间的功能连接来支持情绪关联记忆的编码 138。此外,多模态磁共振成像(结合BOLD信号、灰质体积、分数各向异性等)结合机器学习算法,已被成功应用于预测视觉工作记忆能力,并识别出与工作记忆表现相关的亚皮层-小脑网络、默认模式网络以及胼胝体等脑区,这为理解工作记忆的神经机制提供了更全面的视角 139。默认模式网络(Default Mode Network, DMN)作为一组在认知任务不活跃时表现出高活性的脑区,在记忆(尤其是情景记忆和展望未来)中扮演着核心角色 140。高分辨率fMRI使得研究者能够更精细地解析DMN内部以及DMN与其他功能网络在记忆过程中的动态重组。

钙成像与光遗传学技术:微观层面解析记忆回路

钙成像(Calcium Imaging)和光遗传学(Optogenetics)是神经科学领域革命性的技术,它们分别提供了在细胞和亚细胞水平上观测和操纵神经元活动的能力,为记忆回路的精细解析提供了前所未有的工具。

  • 钙成像:通过在神经元中表达基因编码的钙指示剂,研究者能够实时监测单个神经元或神经元群的活动,因为神经元放电会引起细胞内钙离子浓度的瞬时升高。这使得研究者可以直接观察到记忆印迹(memory engram)细胞在学习和记忆过程中被激活和重激活的动态过程 141142。例如,在清醒活动小鼠中,结合钙成像技术,研究者能够识别并追踪在特定记忆形成时激活的神经元集合,并观察它们在记忆提取时的重新激活情况。研究还利用钙成像揭示了头方向系统在环境地标旋转时的动态活动,发现除了传统的1维环形吸引子网络外,还存在第2个维度(网络增益),该维度能预测网络重排和漂移的动力学,并维持之前地标的“记忆痕迹” 143。

  • 光遗传学:光遗传学技术允许研究者通过光精确地控制特定神经元的活动。通过在神经元中表达对光敏感的离子通道或酶,研究者可以利用不同波长的光来激活或抑制这些神经元。这一技术极大地推动了因果关系研究,使得研究者能够直接验证特定神经元或回路在记忆形成和提取中的作用。例如,研究者通过光遗传学手段操纵小鼠海马体中携带记忆印迹的神经元,成功地创造了人工恐惧记忆,证明了记忆印迹细胞在行为表达中的关键作用 141。此外,结合光遗传学与电压成像技术,研究者在行为中的小鼠体内,实现了对海马行为时间尺度可塑性(behavioral timescale plasticity)的突触基础的解析,发现CA2/3神经元对CA1的突触输入在场所细胞形成过程中发生增强 144。这些研究不仅证实了记忆印迹的存在,也为未来通过精确调控特定神经元活动来干预记忆障碍提供了可能。

钙成像与光遗传学的结合使用,使得研究者能够实现“全光学生理学”,即同时对神经回路进行精确的观测和操纵,从而在活体动物中解析复杂的记忆编码和提取机制。

脑机接口(BCI)在记忆解码中的探索

脑机接口(BCI)技术旨在建立大脑与外部设备之间的直接通信通路,它不仅在辅助运动、交流方面展现出巨大潜力,也为记忆研究提供了全新的视角——即记忆信息的解码与编码。

  • 记忆解码:通过分析大脑活动(如EEG、MEG或颅内电生理信号),BCI技术能够识别和解释与特定记忆内容相关的神经模式。例如,卷积神经网络和对比学习网络已被用于从重复的生理心理学EEG实验中解码工作记忆相关信息,准确率达到65.29% 145。此外,将神经信号转换为文本的BCI系统也取得了进展,能够将与说话相关的神经信号解码为文本输出,为因神经退行性疾病导致交流障碍的患者提供了新的沟通途径,尽管目前仍面临速度和准确性的挑战 146。
  • 记忆编码与增强:更具前瞻性的是,BCI技术正被探索用于直接向大脑“写入”信息或增强记忆功能。这被称为“神经协处理器”(neural co-processors)的概念,即通过结合神经解码和编码,实现神经假体装置与大脑的双向交互 147。例如,通过识别与成功记忆相关的神经模式,然后利用BCI技术在学习过程中增强这些模式,可能有助于提升记忆巩固。在动物模型中,已有研究探索通过电刺激特定脑区来改善记忆功能,未来可能结合BCI技术实现更精准、自适应的记忆增强。

尽管BCI在记忆领域的应用仍处于早期阶段,但其作为一种强大的研究工具和潜在的治疗手段,预示着记忆障碍干预和记忆增强的广阔前景。

6.2 类脑计算与记忆模拟

随着神经科学研究的深入,仅仅依靠实验观察已不足以完全揭示记忆的复杂机制。类脑计算(Brain-Inspired Computing)和记忆模拟通过构建计算模型,试图复现大脑的记忆功能,不仅为理解生物记忆系统提供了理论框架,也为验证神经科学假说提供了强大的工具。同时,人工智能(AI)技术,特别是机器学习,在处理海量神经科学数据、发现隐藏模式以及辅助记忆机制研究方面展现出巨大潜力。

基于神经机制的计算模型验证记忆理论

类脑计算模型旨在模拟大脑的结构和功能,特别是神经元、突触和神经网络的连接模式,以理解信息处理和记忆存储的原理。这些模型能够将抽象的生物学假说转化为可量化的数学和计算形式,从而对其进行严格的测试和验证。

  • 海马体模拟网络:海马体作为情景记忆的核心,其计算模型备受关注。吸引子网络(Attractor Networks)是模拟海马体记忆存储和检索过程的经典模型。这类模型假设记忆模式被存储为网络的稳定平衡点,当输入一个初始刺激时,网络状态会收敛到最接近的记忆模式,从而实现记忆的检索 148。例如,有研究提出了新的能量函数来设计吸引子网络,确保期望的记忆模式是稳定的平衡点,从而避免了不期望的“虚假点”的产生,这为理解生物记忆检索的准确性提供了理论依据 148。
    另一种海马体模型是基于时间差分(Temporal Difference, TD)学习和后继表征(Successor Representation, SR)的预测图理论。该理论认为海马体,特别是CA1区的位置细胞(place cells)放电率,代表了从当前状态到未来状态的转换概率,即海马体学习了空间的预测图 149。这种模型不仅解释了海马体在空间记忆中的作用,还将其与强化学习理论联系起来,暗示了神经可塑性规则与SR学习算法的等效性,从而在神经生物学层面验证了计算理论 149。
  • 神经可塑性与记忆模型:计算模型在理解突触可塑性(LTP/LTD)如何介导记忆存储方面发挥了重要作用。例如,通过模拟赫布学习规则,可以构建网络来学习和存储模式。此外,一些模型还考虑了胶质细胞在记忆中的作用,例如,星形胶质细胞(astrocytes)被发现可能在记忆存储中发挥重要作用,通过它们的形态和生理特性,能够导致一种动态、高容量的联想记忆系统,甚至可能遵循优于传统神经元网络模型的记忆扩展定律 150。这类“神经元-星形胶质细胞联想记忆”模型,将细胞层面的相互作用提升到系统层面的记忆功能解释,为记忆存储提供了新的生物学机制 150。
  • 整合多尺度信息:未来的记忆模型将越来越注重整合不同尺度的信息,从分子层面的离子通道、受体动力学,到细胞层面的神经元放电模式,再到网络层面的脑区连接和信息流。例如,一些模型尝试解释为什么单一神经元本身可以被视为复杂的计算系统,其信息处理和存储能力远超传统人工神经网络中的简单单元,这挑战了我们对认知计算的传统理解,并强调了单个细胞在信息整合和长期记忆痕迹形成中的重要作用 151。

人工智能在记忆机制研究中的辅助作用

人工智能(AI),特别是机器学习(Machine Learning, ML)技术,正在成为神经科学,尤其是记忆研究中不可或缺的工具。它们能够处理和分析神经科学领域产生的大规模、高维度数据,从中发现人眼难以察觉的模式和关系,从而加速对记忆机制的理解。

  • 大数据分析与模式识别:神经科学实验(如神经成像、电生理记录)产生的数据量呈指数级增长。机器学习算法,特别是深度学习(Deep Learning),能够有效地从这些复杂数据中学习特征并识别模式。例如,深度学习在基因组学研究中,被用于分析DNA、RNA和蛋白质数据,从而揭示基因组与记忆功能之间的潜在联系 152。在精神疾病研究中,计算精神病学利用机器学习来整合和分析大型数据集,开发形式化理论,例如在精神分裂症的研究中,通过机器学习、强化学习理论和生物物理模型来理解其病因和病理生理学 153。
  • 预测与诊断:AI模型能够根据生物标志物或行为数据预测记忆相关疾病的发生和进展。例如,利用机器学习模型通过语音和面部表情来检测和区分轻度认知障碍老年人的抑郁、焦虑和冷漠症状,准确率高达96.6% 154。另一项研究也利用机器学习方法来解码肠易激综合征(IBS)患者的心理困扰(如疲劳、焦虑、抑郁)与肠-脑相互作用,显示出高预测准确性 155。这些预测模型有助于早期诊断和个性化治疗。
  • 发现非直觉的洞察:AI有时能够揭示出人类研究者难以发现的非直觉模式。例如,在图像可记忆性(image memorability)研究中,通过大规模行为数据分析发现,图像内容与记忆性之间的映射关系是可预测的,但其模式是非直觉且多方面的 156。这表明AI可以帮助我们发现记忆行为背后更深层次的计算原则。
  • 推动新型记忆模型的开发:AI的发展也反过来激发了新的记忆理论。例如,键值记忆(Key-Value Memory)系统作为现代机器学习系统中的一个核心概念,被提出可以作为大脑记忆的一种计算模型。它区分了用于存储(值)和检索(键)的表征,从而优化了存储保真度和检索可区分性,这为解释大脑的记忆组织提供了新的视角和可能的生物学实现 157。
  • 模拟学习过程与认知模型:强化学习(Reinforcement Learning, RL)等AI方法被用于模拟人类学习过程。虽然传统的深度RL可能样本效率低下,但近期发展的技术使其能更快地解决问题,为理解人类学习的快速和慢速模式提供了新的启示 158。此外,AI模型也被用于模拟认知过程,如上下文记忆(contextual memory)如何促进高效的预测、规划和行为 159。例如,“醒-睡巩固学习”(Wake-Sleep Consolidated Learning, WSCL)模型利用互补学习系统(CLS)理论和人脑的醒-睡阶段来改进深度神经网络在持续学习任务中的表现,这表明AI可以从生物学中汲取灵感,反过来也为生物学记忆研究提供了可测试的计算模型 160。

综上所述,类脑计算和人工智能正在共同推动记忆研究进入一个新时代。计算模型帮助我们验证和完善理论,而AI则在数据分析、模式识别和新发现中发挥着越来越重要的作用,为我们最终全面理解人类大脑的记忆机制铺平道路。

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参考文献

1Neural correlates of auditory sensory memory dynamics in the aging brain.PubMed

Sandeepa Sur, Edward J Golob
Neurobiol Aging. 2020 Apr;88:128-136. doi: 10.1016/j.neurobiolaging.2019.12.020. Epub 2019 Dec 30.
The auditory system allows us to monitor background environmental sound patterns and recognize deviations that may indicate opportunities or threats. The mismatch negativity and P3a potentials have generators in the auditory and inferior frontal cortex and index expected sound patterns (standards) and any aberrations (deviants). The mismatch negativity and P3a waveforms show increased positivity for consecutive standards and deviants preceded by more standards. We hypothesized attenuated repetition effects in older participants, potentially because of differences in prefrontal functions. Young (23 ± 5 years) and older (75 ± 5 years) adults were tested in 2 oddball paradigms with pitch or location deviants. Significant repetition effects were observed in the young standard and deviant waveforms at multiple time windows. Except the earliest time window (30-100 ms), repetition effects were absent in the older group. Repetition effects were significant at frontal but not temporal lobe sites and did not differ among pitch and location deviants. However, P3a repetition was evident in both ages. Findings suggest age differences in the dynamic updating of sensory memory for background sound patterns.

2Neural correlates of auditory sensory memory and automatic change detection.PubMed

Merav Sabri, David A Kareken, Mario Dzemidzic, et al.
Neuroimage. 2004 Jan;21(1):69-74. doi: 10.1016/j.neuroimage.2003.08.033.
An auditory event-related potential component, the mismatch negativity (MMN), reflects automatic change detection and its prerequisite, sensory memory. This study examined the neural correlates of automatic change detection using BOLD fMRI and two rates of presentation previously shown to induce either a large or no MMN. A boxcar block design was employed in two functional scans, each performed twice. A block consisting of 1000-Hz standards (S) alternated with one consisting of 1000-Hz standards and 2000-Hz infrequent deviants (S + D). Presentation rate was either 150 or 2400 ms. Fourteen participants were instructed to ignore all auditory stimulation and concentrate on a film (no audio) by reading subtitles. Data analysis used SPM99 and random effects approach. Cluster statistics (P < 0.05, corrected) were employed at a height threshold of P < 0.001. At the short ISI, there was a significant BOLD response in the right superior temporal gyrus (STG), the left insula, and the left STG (including parts of primary auditory cortex). There were no suprathreshold clusters at the long rate, with S + D blocks inducing no greater activity than S blocks. These results support the hypothesis that the automatic detection of auditory change occurs in the STG bilaterally and relies on the maintenance of sensory memory traces.

3Separate representation of stimulus frequency, intensity, and duration in auditory sensory memory: an event-related potential and dipole-model analysis.PubMed

M H Giard, J Lavikahen, K Reinikainen, et al.
J Cogn Neurosci. 1995 Spring;7(2):133-43. doi: 10.1162/jocn.1995.7.2.133.
Abstract The present study analyzed the neural correlates of acoustic stimulus representation in echoic sensory memory. The neural traces of auditory sensory memory were indirectly studied by using the mismatch negativity (MMN), an event-related potential component elicited by a change in a repetitive sound. The MMN is assumed to reflect change detection in a comparison process between the sensory input from a deviant stimulus and the neural representation of repetitive stimuli in echoic memory. The scalp topographies of the MMNs elicited by pure tones deviating from standard tones by either frequency, intensity, or duration varied according to the type of stimulus deviance, indicating that the MMNs for different attributes originate, at least in part, from distinct neural populations in the auditory cortex. This result was supported by dipole-model analysis. If the MMN generator process occurs where the stimulus information is stored, these findings strongly suggest that the frequency, intensity, and duration of acoustic stimuli have a separate neural representation in sensory memory.

4Short-Term Memory ImpairmentPubMed

Marco Cascella, Yasir Al Khalili
Short-term memory is also called short-term storage, primary memory, or active memory. The term indicates different systems of memory involved in retaining pieces of information, or memory chunks, for a relatively short time, typically up to 30 seconds. In contrast, long-term memory may hold indefinite information. However, the difference is not just the time variable but also their overall functionality. Nevertheless, the 2 systems are closely related. Practically, short-term memory functions as a temporary scratchpad for recalling a limited amount of data, typically around 7 ± 2 items, in the verbal domain, based on George Miller's concept. This information originates from the sensory register and can be processed through attention and recognition. In contrast, information collected in long-term memory storage consists of memories for performing actions or skills, such as procedural memories (knowing how), and memories of facts, rules, concepts, and events, such as declarative memories (knowing that). Declarative memory includes semantic and episodic memory. The former concerns broad knowledge of facts, rules, concepts, and propositions (general knowledge), whereas the latter concerns personal and experienced events and the contexts in which they occurred (personal recollection). Although short-term memory is closely related to the concept of working memory, both are distinct entities. Short-term memory is a set of storage systems, whereas working memory indicates the cognitive operations and executive functions associated with the organization and manipulation of stored information. Nevertheless, the terms short-term memory and working memory are often used interchangeably. Short-term memory must also be distinguished from sensory memory, such as the acoustical echoic and iconic visual memories, which are shorter in duration, typically fractions of a second, and reflect the stimulus's original sensation or perception. In other words, sensory memory is specific to the stimulus modality of presentation. This raw sensory information undergoes processing and, upon processing to short-term, is expressed in a format different from that perceived initially. The famous Atkinson and Shiffrin (or multi-store) model, proposed in the late 1960s, explains the functional correlations between different types of memory. Many studies demonstrated the anatomical and functional distinctions between memory processes, neural correlates, and the functioning of short-term and long-term memory subsystems. In light of these findings, several memory models have been postulated. Although some authors suggested a single memory system encompassing both short- and long-term storage after 50 years, the Atkinson and Shiffrin model remains a valid approach for explaining the memory dynamics. In light of recent research, however, the model has several problems, mostly concerning the characteristics of short-term memory, the relationship between short-term and working memory, and the transition from short- to long-term memory. Short-term memory is a storage system that includes several subsystems with limited capacity. Rather than a limitation, this restriction is an evolutionary survival advantage, as paying attention to limited but essential information, excluding confounding factors, is important. A classic example in biology is prey, which must focus on the hostile environment to recognize a possible attack by the predator. Given the functional peculiarities of short-term memory, which involves the collection of sensory information, the subsystems are closely related to the modalities of sensory memory. Consequently, several sensory-associated subsystems have been postulated, including the visuospatial, phonological (auditory-verbal), tactile, and olfactory domains. These subsystems involve patterns and functional interconnections with the corresponding cortical and subcortical areas and centers. In 1974, Baddeley and Hitch developed an alternative model called working memory. This model does not exclude the modal model but rather enriches the contents. The short-term store can be used to characterize the functioning of the working memory. Working memory refers to the entire theoretical framework of the structures and processes used for storing and temporarily manipulating information, of which short-term memory is only a component. In other words, short-term memory is a functional storage element, whereas working memory is a set of processes involving storage phases. Working memory is constantly used when we have to understand new information, solve a problem, or make an argument, and it is the cognitive strategy for achieving short-term goals. The importance of this type of operating system of memory is demonstrated by the evidence showing that working memory deficits are associated with several developmental disorders of learning, including attention-deficit hyperactivity disorder, dyslexia, and specific language impairment. A recent study on working and short-term memory in children with attention-deficit hyperactivity disorder suggested that these children had an inadequate hemodynamic response in a region of the brain that underlies phonological working memory. Functional near-infrared spectroscopy is a cost-effective, noninvasive neuroimaging technique that localizes and quantifies neural activation patterns related to executive functions. Another study suggested that working memory impairment and attention lapsing are general features of psychotic disorders. Findings regarding capacity estimates from the Change Localization and Detection tasks related to functional capacity and outcome also implied that these methods may be useful in a clinical context. Short-term and long-term memory can be distinguished based on storage capacity and duration. Short-term memoryhas limitations in the amount and duration of information maintained. In contrast, long-term memory features a seemingly unlimited capacity that can last years. The functional distinctions between memory storage systems and the exact mechanisms for how memories transfer from short-term to long-term memory remain controversial. Do short- and long-term memory represent 1 or more systems with specific subsystems? Although short-term memory probably represents a substructure of long-term memory, a form of long-term–activated storage, rather than looking for a physical division, verifying the mechanisms involved in transitioning from short-term to long-term memory seems appropriate. Although the classic multi-modal model proposed that the storage of short-term memories occurs automatically without manipulation, the matter seems more involved. The phenomenon concerns quantitative (number of memories) and qualitative (quality of memory) features. Regarding quantitative data, although the number of Miller of 7 ± 2 items identifies the number of elements included among individual slots, grouping memory bits into larger chunks (chunking) can allow for greater storage capacity. The qualitative issue, or memory modulation within processing, is fascinating. Short-term memory elements undergo processing, providing a sort of editing involving each element's fragmentation (chunking) and re-elaboration. This phase of memory processing is called encoding and can condition subsequent processing, including storage and retrievalThe encoding process encompasses automatic (without conscious awareness) and effortful processing (through attention, practice, and thought) and allows us to retrieve information to make decisions and answer questions. Three pathways are followed during the encoding step—visual (information represented as a picture), acoustic (information represented as a sound), and semantic encoding (the meaning of the information). These processes interconnect, breaking down information into various components. During recovery, the pathway that has produced the coding facilitates the recovery of the other components through a chain reaction. A particular perfume, for instance, makes us recall a specific episode or image. The encoding process affects the recovery, but the recovery undergoes potential changes that can alter the initial content. In neurofunctional terms, the difference is the occurrence in long-term memory of a series of events that must definitively fix the engram(s). This effect occurs through the establishment of neural networks and is expressed as a neurofunctional phenomenon, including long-term potentiation, which is an increase in the strength of the neural transmission deriving from the strengthening of synaptic connections. This process requires gene expression and the synthesis of new proteins and is related to long-lasting structural alterations in the synapses (synaptic consolidation) of the brain areas involved, such as the hippocampus in declarative memories. Hippocampal neurogenesis regulates the maintenance of long-term potentiation. However, the hippocampal network, including the parahippocampal gyrus, hippocampus, and neocortical areas, is not the storage site for memories but plays a crucial role in forming new memories and their subsequent reactivation. The hippocampus appears to have a limited capacity but acquires information quickly and automatically. Over time, the initially available information is permanent in other brain structures, particularly the cortex), independently from the activity of the hippocampus itself. The crucial mechanism of this transfer involves the reactivation (replay) of neural activity configurations. In other words, the connected hippocampus and the medial temporal structures are crucial for holding an event as a whole as they distribute memory traces in an organized manner. The operating system can store, organize, process, and recover hardware files through different software. This hippocampal-guided reactivation (retrieval) leads to the creation of direct connections between the cortical traces and then to the formation of an integrated representation in the neocortex, including the visual association cortex for visual memory, the temporal cortex for auditory memory, and the left lateral temporal cortex for knowledge of word meanings. Moreover, the hippocampus has other specific tasks, such as spatial memory organization. Recent reviews summarized the progress of hippocampal circuits and functions based on sharp-wave ripples. These ripples are crucial for consolidating spatial, episodic, and social memories in different hippocampal-cortical pathways. Dysregulation of sharp-wave ripples contributes to cognitive impairments in neurodegenerative and neurodevelopmental diseases. Other brain areas are involved in memory processes; for example, learning motor skills has links to the activation of the cerebellar regions and brainstem nuclei. Learning perceptive activities, including improvements in processing perceptive stimuli essential in everyday life activities such as understanding spoken and written language, involves basal ganglia and sensory and associative cortices. In contrast, learning cognitive skills related to problem-solving involves the medial temporal lobes.

5What are the differences between long-term, short-term, and working memory?PubMed

Nelson Cowan
Prog Brain Res. 2008;169:323-38. doi: 10.1016/S0079-6123(07)00020-9.
In the recent literature there has been considerable confusion about the three types of memory: long-term, short-term, and working memory. This chapter strives to reduce that confusion and makes up-to-date assessments of these types of memory. Long- and short-term memory could differ in two fundamental ways, with only short-term memory demonstrating (1) temporal decay and (2) chunk capacity limits. Both properties of short-term memory are still controversial but the current literature is rather encouraging regarding the existence of both decay and capacity limits. Working memory has been conceived and defined in three different, slightly discrepant ways: as short-term memory applied to cognitive tasks, as a multi-component system that holds and manipulates information in short-term memory, and as the use of attention to manage short-term memory. Regardless of the definition, there are some measures of memory in the short term that seem routine and do not correlate well with cognitive aptitudes and other measures (those usually identified with the term "working memory") that seem more attention demanding and do correlate well with these aptitudes. The evidence is evaluated and placed within a theoretical framework depicted in Fig. 1.

6Neurophysiology and neuroanatomy of reflexive and volitional saccades: evidence from studies of humans.PubMed

Jennifer E McDowell, Kara A Dyckman, Benjamin P Austin, et al.
Brain Cogn. 2008 Dec;68(3):255-70. doi: 10.1016/j.bandc.2008.08.016. Epub 2008 Oct 5.
This review provides a summary of the contributions made by human functional neuroimaging studies to the understanding of neural correlates of saccadic control. The generation of simple visually guided saccades (redirections of gaze to a visual stimulus or pro-saccades) and more complex volitional saccades require similar basic neural circuitry with additional neural regions supporting requisite higher level processes. The saccadic system has been studied extensively in non-human (e.g., single-unit recordings) and human (e.g., lesions and neuroimaging) primates. Considerable knowledge of this system's functional neuroanatomy makes it useful for investigating models of cognitive control. The network involved in pro-saccade generation (by definition largely exogenously-driven) includes subcortical (striatum, thalamus, superior colliculus, and cerebellar vermis) and cortical (primary visual, extrastriate, and parietal cortices, and frontal and supplementary eye fields) structures. Activation in these regions is also observed during endogenously-driven voluntary saccades (e.g., anti-saccades, ocular motor delayed response or memory saccades, predictive tracking tasks and anticipatory saccades, and saccade sequencing), all of which require complex cognitive processes like inhibition and working memory. These additional requirements are supported by changes in neural activity in basic saccade circuitry and by recruitment of additional neural regions (such as prefrontal and anterior cingulate cortices). Activity in visual cortex is modulated as a function of task demands and may predict the type of saccade to be generated, perhaps via top-down control mechanisms. Neuroimaging studies suggest two foci of activation within FEF - medial and lateral - which may correspond to volitional and reflexive demands, respectively. Future research on saccade control could usefully (i) delineate important anatomical subdivisions that underlie functional differences, (ii) evaluate functional connectivity of anatomical regions supporting saccade generation using methods such as ICA and structural equation modeling, (iii) investigate how context affects behavior and brain activity, and (iv) use multi-modal neuroimaging to maximize spatial and temporal resolution.

7Temporal Expectation Modulates the Cortical Dynamics of Short-Term Memory.PubMed

Anna Wilsch, Molly J Henry, Björn Herrmann, et al.
J Neurosci. 2018 Aug 22;38(34):7428-7439. doi: 10.1523/JNEUROSCI.2928-17.2018. Epub 2018 Jul 16.
Increased memory load is often signified by enhanced neural oscillatory power in the alpha range (8-13 Hz), which is taken to reflect inhibition of task-irrelevant brain regions. The corresponding neural correlates of memory decay, however, are not yet well understood. In the current study, we investigated auditory short-term memory decay in humans using a delayed matching-to-sample task with pure-tone sequences. First, in a behavioral experiment, we modeled memory performance over six different delay-phase durations. Second, in a MEG experiment, we assessed alpha-power modulations over three different delay-phase durations. In both experiments, the temporal expectation for the to-be-remembered sound was manipulated so that it was either temporally expected or not. In both studies, memory performance declined over time, but this decline was weaker when the onset time of the to-be-remembered sound was expected. Similarly, patterns of alpha power in and alpha-tuned connectivity between sensory cortices changed parametrically with delay duration (i.e., decrease in occipitoparietal regions, increase in temporal regions). Temporal expectation not only counteracted alpha-power decline in heteromodal brain areas (i.e., supramarginal gyrus), but also had a beneficial effect on memory decay, counteracting memory performance decline. Correspondingly, temporal expectation also boosted alpha connectivity within attention networks known to play an active role during memory maintenance. The present data show how patterns of alpha power orchestrate short-term memory decay and encourage a more nuanced perspective on alpha power across brain space and time beyond its inhibitory role. Our sensory memories of the physical world fade quickly. We show here that this decay of short-term memory can be counteracted by so-called temporal expectation; that is, knowledge of when to expect a sensory event that an individual must remember. We also show that neural oscillations in the "alpha" (8-13 Hz) range index both the degree of memory decay (for brief sound patterns) and the respective memory benefit from temporal expectation. Spatially distributed cortical patterns of alpha power show opposing effects in auditory versus visual sensory cortices. Moreover, alpha-tuned connectivity changes within supramodal attention networks reflect the allocation of neural resources as short-term memory representations fade.

8Field-Dependent/Field-Independent Learners' Information Processing Behavior in an Implicit Learning Task: Evidence from Iranian EFL Learners.PubMed

Elaheh Hamed Mahvelati
J Psycholinguist Res. 2020 Dec;49(6):955-973. doi: 10.1007/s10936-020-09712-9.
The present research aimed to investigate how field-dependent and field-independent learners perceived and processed information when they were engaged in an implicit foreign language learning task and to explore differences between them in this regard. The majority of studies in the pertinent literature have adopted quantitative methods to date. The present study, however, employed three qualitative data collection techniques, namely retrospective think-aloud method, tests of episodic memory and interviews, to gain a better understanding of field-dependent and field- independent learners' strategies and performance in different stages of information processing. Twelve Iranian field-independent and field-dependent intermediate language learners participated in this study. The results showed that the field-independent learners were more efficient in directing their attentional resources in the sensory-memory stage and encoding and storing new information in their working memory. Hence, they recalled and retrieved the information from their short- and long-term memory more efficiently. Some educational implications are discussed.

9DNA Methylation in Long-Term Memory.PubMed

Xinyue Chen, Yueqing Peng, X Shawn Liu
Physiology (Bethesda). 2025 Jul 1;40(4):0. doi: 10.1152/physiol.00032.2024. Epub 2025 Feb 5.
Understanding the neural mechanisms of memory has been one of the key questions in biology. Long-term memory, specifically, allows one to travel mentally without constraints of time and space. A long-term memory must have gone through a series of temporal processes: encoding, consolidation, storage, and retrieval. Decades of studies have revealed cellular and molecular mechanisms underlying each process. In this article, we first review the emerging concept of memory engrams and technologies of engram labeling, as these methods provide a new avenue to study the molecular mechanisms for memory. Then, we focus on DNA methylation and its role in long-term memory. Finally, we discuss some key remaining questions in this field and their implications in memory-related disease.

10Molecular Mechanisms of the Memory Trace.PubMed

Arun Asok, Félix Leroy, Joseph B Rayman, et al.
Trends Neurosci. 2019 Jan;42(1):14-22. doi: 10.1016/j.tins.2018.10.005. Epub 2018 Oct 31.
Over the past half-century, we have gained significant insights into the molecular biology of long-term memory storage at the level of the synapse. In recent years, our understanding of the cellular architecture supporting long-term memory traces has also substantially improved. However, the molecular biology of consolidation at the level of neuronal systems has been relatively neglected. In this opinion article, we first examine our current understanding of the cellular mechanisms of synaptic consolidation. We then outline areas requiring further investigation on how cellular changes contribute to systems consolidation. Finally, we highlight recent findings on the cellular architecture of memory traces in rodents and how the application of new technologies will expand our understanding of systems consolidation at the neural circuit level. In the coming years, this research focus will be critical for understanding the evolution of long-term memories and for enabling the development of novel therapeutics which embrace the dynamic nature of memories.

11The Consolidation and Transformation of Memory.PubMed

Yadin Dudai, Avi Karni, Jan Born
Neuron. 2015 Oct 7;88(1):20-32. doi: 10.1016/j.neuron.2015.09.004.
Memory consolidation refers to the transformation over time of experience-dependent internal representations and their neurobiological underpinnings. The process is assumed to be embodied in synaptic and cellular modifications at brain circuits in which the memory is initially encoded and to proceed by recurrent reactivations, both during wakefulness and during sleep, culminating in the distribution of information to additional locales and integration of new information into existing knowledge. We present snapshots of our current knowledge and gaps in knowledge concerning the progress of consolidation over time and the cognitive architecture that supports it and shapes our long-term memories.

12The medial temporal lobe.PubMed

Larry R Squire, Craig E L Stark, Robert E Clark
Annu Rev Neurosci. 2004;27:279-306. doi: 10.1146/annurev.neuro.27.070203.144130.
The medial temporal lobe includes a system of anatomically related structures that are essential for declarative memory (conscious memory for facts and events). The system consists of the hippocampal region (CA fields, dentate gyrus, and subicular complex) and the adjacent perirhinal, entorhinal, and parahippocampal cortices. Here, we review findings from humans, monkeys, and rodents that illuminate the function of these structures. Our analysis draws on studies of human memory impairment and animal models of memory impairment, as well as neurophysiological and neuroimaging data, to show that this system (a) is principally concerned with memory, (b) operates with neocortex to establish and maintain long-term memory, and (c) ultimately, through a process of consolidation, becomes independent of long-term memory, though questions remain about the role of perirhinal and parahippocampal cortices in this process and about spatial memory in rodents. Data from neurophysiology, neuroimaging, and neuroanatomy point to a division of labor within the medial temporal lobe. However, the available data do not support simple dichotomies between the functions of the hippocampus and the adjacent medial temporal cortex, such as associative versus nonassociative memory, episodic versus semantic memory, and recollection versus familiarity.

13Long-term effects of directed forgetting.PubMed

Almut Hupbach
Memory. 2018 Mar;26(3):321-329. doi: 10.1080/09658211.2017.1358748. Epub 2017 Aug 2.
The intention to forget reduces the accessibility of information in memory, which is commonly explained with temporary retrieval difficulties. Long-term effects have rarely been studied, and results are inconsistent. The present study re-assessed the long-term effects of directed forgetting (DF). Participants encoded a first list of items (L1), and were then instructed to forget or to remember this list. Immediately afterwards, all participants were presented with a second list to remember. In Experiment 1, memory for L1 and L2 was assessed after a 24-h delay. The forget cue reduced the number of items that were recalled from L1. Experiment 2 implemented a 12-h delay between encoding and test that was either filled with day-time wakefulness or night-time sleep. Replicating the findings of Exp. 1, recall of L1 was reduced in the forget in comparison to the remember condition. Sleep in comparison to wakefulness significantly strengthened L1 memory in the remember group only. Taken together, the present study shows that the intention to forget can have long-lasting consequences. This suggests that different mechanisms underlie the short- and long-term effects of DF, with long-term effects potentially reflecting the preferential consolidation of information that has been identified as important during encoding.

14The porous boundaries between explicit and implicit memory: behavioral and neural evidence.PubMed

Ilana T Z Dew, Roberto Cabeza
Ann N Y Acad Sci. 2011 Apr;1224:174-190. doi: 10.1111/j.1749-6632.2010.05946.x.
Explicit memory refers to the conscious retrieval of past information or experiences, whereas implicit memory refers to an unintentional or nonconscious form of retrieval. Much of the literature in cognitive psychology and cognitive neuroscience has focused on differences between explicit and implicit memory, and the traditional view is that they rely on distinct brain systems. However, the potential interplay between implicit and explicit memory is not always clear. This review draws from behavioral and functional neuroimaging evidence to evaluate three areas in which implicit and explicit memory may be interrelated. First, we discuss views of familiarity-based recognition in terms of its relationship with implicit memory. Second, we review the challenges of distinguishing between implicit memory and involuntary aware memory, at both behavioral and neural levels. Finally, we examine evidence indicating that implicit and explicit retrieval of relational information may rely on a common neural mechanism. Taken together, these areas indicate that, under certain circumstances, there may be an important and influential relationship between conscious and nonconscious expressions of memory.

15Episodic Memory formation: A review of complex Hippocampus input pathways.PubMed

Krubeal Danieli, Alice Guyon, Ingrid Bethus
Prog Neuropsychopharmacol Biol Psychiatry. 2023 Aug 30;126:110757. doi: 10.1016/j.pnpbp.2023.110757. Epub 2023 Apr 21.
Memories of everyday experiences involve the encoding of a rich and dynamic representation of present objects and their contextual features. Traditionally, the resulting mnemonic trace is referred to as Episodic Memory, i.e. the "what", "where" and "when" of a lived episode. The journey for such memory trace encoding begins with the perceptual data of an experienced episode handled in sensory brain regions. The information is then streamed to cortical areas located in the ventral Medio Temporal Lobe, which produces multi-modal representations concerning either the objects (in the Perirhinal cortex) or the spatial and contextual features (in the parahippocampal region) of the episode. Then, this high-level data is gated through the Entorhinal Cortex and forwarded to the Hippocampal Formation, where all the pieces get bound together. Eventually, the resulting encoded neural pattern is relayed back to the Neocortex for a stable consolidation. This review will detail these different stages and provide a systematic overview of the major cortical streams toward the Hippocampus relevant for Episodic Memory encoding.

16[Memory diseases].PubMed

François Sellal, Cécile Weiss
Rev Prat. 2023 Dec;73(10):1081-1084.
MEMORY DISEASES. There are many diseases that permanently affect longterm memory and all of them have in common that they permanently and usually bilaterally disrupt specific neural circuits that underlie it. In the forefront is the Papez circuit, or hippocampo-mamillo-thalamo-cingular circuit, which is also connected to the fronto-basal regions. Its impairment leads to disorders of episodic memory, with relative preservation of semantic memory and implicit learning. The anterior temporal pole is a hub allowing access to general knowledge distributed in the cortex. Its damage results in an amnesic picture in which the loss of semantic memory dominates. The richness of memory disorders is largely deduced, in its nuances, from the lesion topographies. The most frequent aetiology of memory diseases is represented by neurodegenerative diseases, dominated by Alzheimer's disease, but the semiology of these is by far not limited to a memory disorder, because of the diffusion of lesions. Dysimmune, infectious or toxic encephalitis affecting the hippocampi, Korsakoff's syndrome affecting the thalamus and mamillary bodies, « semantic dementia » affecting the temporal pole, give pictures where memory disorders are in the foreground with remarkable semiological nuances. Post-traumatic amnesia, due to the heterogeneity of the lesions, offers a more complex picture, where memory disorders are complemented by executive disorders, sometimes major.

17Engrams and circuits crucial for systems consolidation of a memory.PubMed

Takashi Kitamura, Sachie K Ogawa, Dheeraj S Roy, et al.
Science. 2017 Apr 7;356(6333):73-78. doi: 10.1126/science.aam6808.
Episodic memories initially require rapid synaptic plasticity within the hippocampus for their formation and are gradually consolidated in neocortical networks for permanent storage. However, the engrams and circuits that support neocortical memory consolidation have thus far been unknown. We found that neocortical prefrontal memory engram cells, which are critical for remote contextual fear memory, were rapidly generated during initial learning through inputs from both the hippocampal-entorhinal cortex network and the basolateral amygdala. After their generation, the prefrontal engram cells, with support from hippocampal memory engram cells, became functionally mature with time. Whereas hippocampal engram cells gradually became silent with time, engram cells in the basolateral amygdala, which were necessary for fear memory, were maintained. Our data provide new insights into the functional reorganization of engrams and circuits underlying systems consolidation of memory.

18Temporal pole volume is associated with episodic autobiographical memory in healthy older adults.PubMed

Roni Setton, Signy Sheldon, Gary R Turner, et al.
Hippocampus. 2022 May;32(5):373-385. doi: 10.1002/hipo.23411. Epub 2022 Mar 5.
Recollection of personal past events differs across the lifespan. Older individuals recall fewer episodic details and convey more semantic information than young. Here we examine how gray matter volumes in temporal lobe regions integral to episodic and semantic memory (hippocampus and temporal poles, respectively) are related to age differences in autobiographical recollection. Gray matter volumes were obtained in healthy young (n = 158) and old (n = 105) adults. The temporal pole was demarcated and hippocampus segmented into anterior and posterior regions to test for volume differences between age groups. The Autobiographical Interview was administered to measure episodic and semantic autobiographical memory. Volume associations with episodic and semantic autobiographical memory were then assessed. Brain volumes were smaller for older adults in the posterior hippocampus. Autobiographical memory was less episodic and more semanticized for older versus younger adults. Older adults also showed positive associations between temporal pole volumes and episodic autobiographical recall; in the young, temporal pole volume was positively associated with performance on standard laboratory measures of semantic memory. Exploratory analyses revealed that age-related episodic autobiographical memory associations with anterior hippocampal volumes depended on sex. These findings suggest that age differences in brain structures implicated in episodic and semantic memory may portend reorganization of neural circuits to support autobiographical memory in later life.

19Neural correlates of episodic and semantic memory retrieval in borderline personality disorder: an fMRI study.PubMed

Christoph Mensebach, Thomas Beblo, Martin Driessen, et al.
Psychiatry Res. 2009 Feb 28;171(2):94-105. doi: 10.1016/j.pscychresns.2008.02.006. Epub 2009 Jan 26.
Verbal memory impairment in borderline personality disorder (BPD) is still a matter of debate. In this study we combine investigations of both, memory retrieval as well as underlying neural circuits in BPD. Functional magnetic resonance imaging (fMRI) was used to study regional brain activation in 18 right-handed female patients with BPD and 18 matched controls during the retrieval of an episodic memory retrieval (EMR) task (free recall of a word list) and a semantic memory retrieval (SMR) task (verbal fluency). Despite unaffected performance in EMR and SMR, patients with BPD showed task-specific increased activation compared with controls. During EMR, the increased activation encompassed the posterior cingulate cortex bilaterally, the left middle and superior temporal gyrus, the right inferior frontal gyrus, and the right angular gyrus. SMR was associated with increased activation of the posterior cingulate cortex, of the right fusiform gyrus, of the left anterior cingulate cortex, and of the left postcentral gyrus. Our findings suggest that BPD patients may need to engage larger brain areas to reach a level of performance in episodic and semantic retrieval tasks that is comparable to that of healthy controls.

20Understanding memory dysfunction.PubMed

Andrew E Budson
Neurologist. 2009 Mar;15(2):71-9. doi: 10.1097/NRL.0b013e318188040d.
BACKGROUND: Although traditionally memory has been viewed as a simple concept, converging and complementary evidence from patient studies and more recent neuroimaging research suggest that memory is a collection of mental abilities that use different neuroanatomical systems within the brain. Neurologic injury may cause damage to one or more of these memory systems. REVIEW SUMMARY: In this review a number of different memory systems are discussed, including their function, neuroanatomy, and the different disorders that disrupt them. Episodic memory, the most clinically relevant memory system, depends upon the hippocampus and other medial temporal lobe structures, the limbic system, and the frontal lobes. Several other kinds of memory are contrasted with episodic memory, including semantic memory, simple classic conditioning, procedural memory, priming, and working memory. CONCLUSION: Improved understanding of these different types of memory will aid the clinician in the diagnosis and treatment of the memory disorders of their patients. As more specific therapeutic strategies are developed for the treatment of diseases which cause memory dysfunction, this knowledge will become increasingly important.

21Striatal plasticity and basal ganglia circuit function.PubMed

Anatol C Kreitzer, Robert C Malenka
Neuron. 2008 Nov 26;60(4):543-54. doi: 10.1016/j.neuron.2008.11.005.
The dorsal striatum, which consists of the caudate and putamen, is the gateway to the basal ganglia. It receives convergent excitatory afferents from cortex and thalamus and forms the origin of the direct and indirect pathways, which are distinct basal ganglia circuits involved in motor control. It is also a major site of activity-dependent synaptic plasticity. Striatal plasticity alters the transfer of information throughout basal ganglia circuits and may represent a key neural substrate for adaptive motor control and procedural memory. Here, we review current understanding of synaptic plasticity in the striatum and its role in the physiology and pathophysiology of basal ganglia function.

22Evidence of stable individual differences in implicit learning.PubMed

Priya B Kalra, John D E Gabrieli, Amy S Finn
Cognition. 2019 Sep;190:199-211. doi: 10.1016/j.cognition.2019.05.007. Epub 2019 May 16.
There is a fundamental psychological and neuropsychological distinction between explicit and implicit memory, and it has been proposed that whereas there are stable trait individual differences in explicit memory ability, there are not such differences across people for implicit learning. There is, however, little evidence about whether or not there are stable trait differences in implicit learning. Here we performed a test-retest reliability study with healthy young adults in which they performed four implicit learning tasks (artificial grammar learning, probabilistic classification, serial response, and implicit category learning) twice, about a week apart. We found medium (by Cohen's guidelines) test-retest reliability for three of the tasks: probabilistic classification, serial response, and implicit category learning, suggesting that differences in implicit learning ability are more stable than originally thought. In addition, implicit learning on all tasks was unrelated to explicit measures: we did not find any correlation between implicit learning measures and independent measures of IQ, working memory, or explicit learning ability. These findings indicate that implicit learning, like explicit learning, varies reliably across individuals.

23Behavioral and neural mechanisms by which prior experience impacts subsequent learning.PubMed

Ryan G Parsons
Neurobiol Learn Mem. 2018 Oct;154:22-29. doi: 10.1016/j.nlm.2017.11.008. Epub 2017 Nov 16.
Memory is often thought about in terms of its ability to recollect and store information about the past, but its function likely rests with the fact that it permits adaptation to ongoing and future experience. Thus, the brain circuitry that encodes memory must act as if stored information is likely to be modified by subsequent experience. Considerable progress has been made in identifying the behavioral and neural mechanisms supporting the acquisition and consolidation of memories, but this knowledge comes largely from studies in laboratory animals in which the training experience is presented in isolation from prior experimentally-controlled events. Given that memories are unlikely to be formed upon a clean slate, there is a clear need to understand how learning occurs upon the background of prior experience. This article reviews recent studies from an emerging body of work on metaplasticity, memory allocation, and synaptic tagging and capture, all of which demonstrate that prior experience can have a profound effect on subsequent learning. Special attention will be given to discussion of the neural mechanisms that allow past experience to affect future learning and to the time course by which past learning events can alter subsequent learning. Finally, consideration will be given to the possible significance of a non-synaptic component of the memory trace, which in some cases is likely responsible for the priming of subsequent learning and may be involved in the recovery from amnestic treatments in which the synaptic mechanisms of memory have been impaired.

24Movement-Based Priming: Clinical Applications and Neural Mechanisms.PubMed

Mary Ellen Stoykov, Daniel Montie Corcos, Sangeetha Madhavan
J Mot Behav. 2017 Jan-Feb;49(1):88-97. doi: 10.1080/00222895.2016.1250716. Epub 2017 Mar 1.
Priming can be described as behavior change generated by preceding stimuli. Although various types of priming have been long studied in the field of psychology, priming that targets motor cortex is a relatively new topic of research in the fields of motor control and rehabilitation. In reference to a rehabilitation intervention, priming is categorized as a restorative approach. There are a myriad of possible priming approaches including noninvasive brain stimulation, motor imagery, and sensory-based priming, to name a few. The authors report on movement-based priming which, compared to other priming types, is less frequently examined and under reported. Movement-based priming includes, but is not limited to, bilateral motor priming, unilateral priming, and aerobic exercise. Clinical and neural mechanistic aspects of movement-based priming techniques are explored.

25Neural mechanisms of priming effects of spicy food pictures induced analgesia.PubMed

Di Yang, Jin Jiang, Wanchen Li, et al.
Biol Psychol. 2023 Nov;184:108688. doi: 10.1016/j.biopsycho.2023.108688. Epub 2023 Sep 18.
In this study, the effects of the priming of spicy food pictures on pain perception were evaluated in female participants using standardized methods of pain. Results from behavior tests revealed that the priming of spicy food pictures significantly reduced pain perception, particularly at high-pain intensities. Electrophysiological analysis showed that the analgesic effects of spicy food pictures were linked to decreased pain-related event-related potentials, such as N2 and P2 amplitudes, and suppressed θ-oscillations in the sensorimotor cortex. Both N2 amplitudes and θ-oscillations activities were found to be correlated with participants' pain perception. These results suggest that spicy-arousal stimuli may act as an "antagonist" to the increase in N2 amplitudes and θ-oscillations power induced by pain and influence the neuronal networks involved in integrating spontaneous nociceptive resources, which supports the dissociation theory of pain sensation and affection. These findings highlight the potential use of spicy-arousal stimuli as an analgesic and emphasize the importance of considering both the intensity of the stimuli and the individual's emotional state in the assessment and treatment of pain.

26Implicit memory reduced selectively for negative words with aging.PubMed

Sandra L Ladd, John D E Gabrieli
Front Aging Neurosci. 2024 Oct 9;16:1454867. doi: 10.3389/fnagi.2024.1454867. eCollection 2024.
BACKGROUND: Disproportionally better memory for positive versus negative information (mnemonic positivity effect, MPE) in older versus younger adults has been reported on tests of explicit memory (direct, intentional) as measured by recall and recognition. The purpose of this investigation was to examine whether the MPE would be observed for implicit memory (indirect, unintentional) under conditions where, based on previous research using single words, it was expected that the MPE for explicit memory would be absent. METHODS: This study investigated the influence of age on explicit and implicit memory for positive, negative, and neutral single words as measured by yes/no recognition and word identification on 24 older adults (aged 66-85) and 24 younger adults (aged 18-37) recruited from community centers in South Boston, Massachusetts. RESULTS: Older adults had lower recognition memory accuracy for positive, negative, and neutral words than younger adults, and, consistent with most prior studies, did not exhibit an explicit memory MPE for single words. For both groups, recognition accuracy was greatest for negative words, and was similar for positive and neutral words. In contrast, older adults exhibited implicit repetition priming, as measured by superior identification performance for repeated words, that was similar to younger adults for positive and neutral words. In younger adults, implicit memory was significantly greater for negative words than for positive and neutral words, whereas in older adults there were no significant differences in implicit memory for negative, positive, and neutral words. Therefore, selectively reduced priming for negative words in older adults was found in the context of enhanced priming for negative words in the younger adults. CONCLUSION: These findings show that there was an implicit memory MPE in older adults for words even under conditions where there was no explicit memory MPE in the older adults. Dampening of negative valence implicit memory with aging expands the perimeter of the age-related positivity framework.

27A neurocognitive perspective on language: the declarative/procedural model.PubMed

M T Ullman
Nat Rev Neurosci. 2001 Oct;2(10):717-26. doi: 10.1038/35094573.
What are the psychological, computational and neural underpinnings of language? Are these neurocognitive correlates dedicated to language? Do different parts of language depend on distinct neurocognitive systems? Here I address these and other issues that are crucial for our understanding of two fundamental language capacities: the memorization of words in the mental lexicon, and the rule-governed combination of words by the mental grammar. According to the declarative/procedural model, the mental lexicon depends on declarative memory and is rooted in the temporal lobe, whereas the mental grammar involves procedural memory and is rooted in the frontal cortex and basal ganglia. I argue that the declarative/procedural model provides a new framework for the study of lexicon and grammar.

28The hippocampal-striatal axis in learning, prediction and goal-directed behavior.PubMed

C M A Pennartz, R Ito, P F M J Verschure, et al.
Trends Neurosci. 2011 Oct;34(10):548-59. doi: 10.1016/j.tins.2011.08.001. Epub 2011 Sep 1.
The hippocampal formation and striatum subserve declarative and procedural memory, respectively. However, experimental evidence suggests that the ventral striatum, as opposed to the dorsal striatum, does not lend itself to being part of either system. Instead, it may constitute a system integrating inputs from the amygdala, prefrontal cortex and hippocampus to generate motivational, outcome-predicting signals that invigorate goal-directed behaviors. Inspired by reinforcement learning models, we suggest an alternative scheme for computational functions of the striatum. Dorsal and ventral striatum are proposed to compute outcome predictions largely in parallel, using different types of information as input. The nature of the inputs to striatum is furthermore combinatorial, and the specificity of predictions transcends the level of scalar value signals, incorporating episodic information.

29The effects of aging in the hippocampus and cognitive decline.PubMed

Luis E B Bettio, Luckshi Rajendran, Joana Gil-Mohapel
Neurosci Biobehav Rev. 2017 Aug;79:66-86. doi: 10.1016/j.neubiorev.2017.04.030. Epub 2017 May 2.
Aging is a natural process that is associated with cognitive decline as well as functional and social impairments. One structure of particular interest when considering aging and cognitive decline is the hippocampus, a brain region known to play an important role in learning and memory consolidation as well as in affective behaviours and mood regulation, and where both functional and structural plasticity (e.g., neurogenesis) occur well into adulthood. Neurobiological alterations seen in the aging hippocampus including increased oxidative stress and neuroinflammation, altered intracellular signalling and gene expression, as well as reduced neurogenesis and synaptic plasticity, are thought to be associated with age-related cognitive decline. Non-invasive strategies such as caloric restriction, physical exercise, and environmental enrichment have been shown to counteract many of the age-induced alterations in hippocampal signalling, structure, and function. Thus, such approaches may have therapeutic value in counteracting the deleterious effects of aging and protecting the brain against age-associated neurodegenerative processes.

30Targeted enhancement of cortical-hippocampal brain networks and associative memory.PubMed

Jane X Wang, Lynn M Rogers, Evan Z Gross, et al.
Science. 2014 Aug 29;345(6200):1054-7. doi: 10.1126/science.1252900.
The influential notion that the hippocampus supports associative memory by interacting with functionally distinct and distributed brain regions has not been directly tested in humans. We therefore used targeted noninvasive electromagnetic stimulation to modulate human cortical-hippocampal networks and tested effects of this manipulation on memory. Multiple-session stimulation increased functional connectivity among distributed cortical-hippocampal network regions and concomitantly improved associative memory performance. These alterations involved localized long-term plasticity because increases were highly selective to the targeted brain regions, and enhancements of connectivity and associative memory persisted for ~24 hours after stimulation. Targeted cortical-hippocampal networks can thus be enhanced noninvasively, demonstrating their role in associative memory.

31The hippocampus and related neocortical structures in memory transformation.PubMed

Melanie J Sekeres, Gordon Winocur, Morris Moscovitch
Neurosci Lett. 2018 Jul 27;680:39-53. doi: 10.1016/j.neulet.2018.05.006. Epub 2018 May 4.
Episodic memories are multifaceted and malleable, capable of being transformed with time and experience at both the neural level and psychological level. At the neural level, episodic memories are transformed from being dependent on the hippocampus to becoming represented in neocortical structures, such as the medial prefrontal cortex (mPFC), and back again, while at the psychological level, detailed, perceptually rich memories, are transformed to ones retaining only the gist of an experience or a schema related to it. Trace Transformation Theory (TTT) initially proposed that neural and psychological transformations are linked and proceed in tandem. Building on recent studies on the neurobiology of memory transformation in rodents and on the organization of the hippocampus and its functional cortical connectivity in humans, we present an updated version of TTT that is more precise and detailed with respect to the dynamic processes and structures implicated in memory transformation. At the heart of the updated TTT lies the long axis of the hippocampus whose functional differentiation and connectivity to neocortex make it a hub for memory formation and transformation. The posterior hippocampus, connected to perceptual and spatial representational systems in posterior neocortex, supports fine, perceptually rich, local details of memories; the anterior hippocampus, connected to conceptual systems in anterior neocortex, supports coarse, global representations that constitute the gist of a memory. Notable among the anterior neocortical structures is the medial prefrontal cortex (mPFC) which supports representation of schemas that code for common aspects of memories across different episodes. Linking the aHPC with mPFC is the entorhinal cortex (EC) which conveys information needed for the interaction/translation between gist and schemas. Thus, the long axis of the hippocampus, mPFC and EC provide the representational gradient, from fine to coarse and from perceptual to conceptual, that can implement processes implicated in memory transformation. Each of these representations of an episodic memory can co-exist and be in dynamic flux as they interact with one another throughout the memory's lifetime, going from detailed to schematic and possibly back again, all mediated by corresponding changes in neural representation.

32Norepinephrine and glucocorticoid effects on the brain mechanisms underlying memory accuracy and generalization.PubMed

Sevgi Bahtiyar, Kubra Gulmez Karaca, Marloes J A G Henckens, et al.
Mol Cell Neurosci. 2020 Oct;108:103537. doi: 10.1016/j.mcn.2020.103537. Epub 2020 Aug 14.
Stressful and emotionally arousing experiences activate hormonal and brain systems that create strong memories. Extensive evidence indicates that this strengthening effect involves the synergistic action of both norepinephrine and glucocorticoid hormones. This tight regulation of emotional memories is normally highly adaptive and pivotal for survival; yet, aberrant memory processing of stressful events is a major risk factor for the development of stress-related psychopathology. It remains unclear, however, to what extent these two stress hormone systems also affect the quality of such strengthened memories. In this Review, we discuss recent advances in the understanding of norepinephrine and glucocorticoid effects on the accuracy and generalization of contextual or episodic-like aspects of memory in rodents. We will argue that norepinephrine and glucocorticoids exert opposite effects on accuracy and generalization of memory through distinct effects on systems consolidation processes underlying the time-dependent reorganization of memory. Norepinephrine improves memory accuracy by boosting basolateral amygdala-hippocampal connectivity, hereby creating long-lasting hippocampus-dependent episodic-like memories. In contrast, glucocorticoids contribute to memory generalization by promoting integration of new memories into neocortical networks, decreasing hippocampal dependence. We discuss possible implications of these conceptual insights for understanding inter-individual differences in stress resilience and risk for psychopathology.

33Memory engram stability and flexibility.PubMed

Yosif Zaki, Denise J Cai
Neuropsychopharmacology. 2024 Nov;50(1):285-293. doi: 10.1038/s41386-024-01979-z. Epub 2024 Sep 18.
Many studies have shown that memories are encoded in sparse neural ensembles distributed across the brain. During the post-encoding period, often during sleep, many of the cells that were active during encoding are reactivated, supporting consolidation of this memory. During memory recall, many of the same cells that were active during encoding and reactivated during consolidation are reactivated during recall. These ensembles of cells have been referred to as the memory engram cells, stably representing a specific memory. However, recent studies question the rigidity of the "stable memory engram." Here we review the past literature of how episodic-like memories are encoded, consolidated, and recalled. We also highlight more recent studies (as well as some older literature) that suggest that these stable memories and their representations are much more dynamic and flexible than previously thought. We highlight some of these processes, including memory updating, reconsolidation, forgetting, schema learning, memory-linking, and representational drift.

34Executive Dysfunction and the Prefrontal Cortex.PubMed

David T Jones, Jonathan Graff-Radford
Continuum (Minneap Minn). 2021 Dec 1;27(6):1586-1601. doi: 10.1212/CON.0000000000001009.
PURPOSE OF REVIEW: This article summarizes the cognitive and behavioral functions of the prefrontal cortex with an emphasis on executive cognitive functions and the clinical consequences associated with executive dysfunction. The clinical manifestations of lesions to the lateral prefrontal, orbitofrontal, medial prefrontal, and frontopolar cortex are reviewed. RECENT FINDINGS: Traditional lesion studies have emphasized the role of a brain region in controlling a cognitive function. With advances in neurology, neuropsychology, and neuroimaging, the participation of the prefrontal cortex in large-scale networks has been established with recognition that cognitive dysfunction can arise not only from a lesion within a network but also from degenerative disease targeting these large-scale, dynamic neural networks. Although executive dysfunction can result from frontal lobe injury, this article highlights the role of distributed processes subserving executive functions. An atypical phenotype of Alzheimer disease has been described that selectively targets parietal-temporal-frontal networks important for core executive functions. SUMMARY: Executive function comprises working memory, cognitive flexibility, and inhibition and depends on top-down (ie, goal-driven) control of distributed processes occurring throughout the brain. The exact behavioral output (ie, function) depends on the content of the processes being controlled. Prefrontal cortex regions serve key cognitive functions related to social, emotional, and motivational aspects of behavior. The dorsal lateral prefrontal cortex plays a role in working memory, goal-driven attention, task switching, planning, problem-solving, and novelty-seeking. The ventral lateral prefrontal cortex plays a role in inhibition, response selection, and monitoring; the medial prefrontal cortex in self-knowledge, motivation, emotional regulation, and updating goal-directed behavior; the orbitofrontal cortex in personality, inhibition, and emotional and social reasoning. Although dysexecutive syndromes have been traditionally associated with dorsolateral prefrontal cortex injury, it is now recognized that they can also result from an impaired parietal-temporal-frontal system, which is targeted in a distinct form of atypical Alzheimer disease. This dysexecutive Alzheimer phenotype is characterized by impaired task performance on a wide battery of neuropsychological tests and simple daily tasks that require executive control. In contrast, dysexecutive syndromes more localized to the frontal lobe involve impaired executive control of social, emotional, and motivational aspects of behavior.

35Stress and Inflammation Target Dorsolateral Prefrontal Cortex Function: Neural Mechanisms Underlying Weakened Cognitive Control.PubMed

Mary Kate P Joyce, Stacy Uchendu, Amy F T Arnsten
Biol Psychiatry. 2025 Feb 15;97(4):359-371. doi: 10.1016/j.biopsych.2024.06.016. Epub 2024 Jun 27.
Most mental disorders involve dysfunction of the dorsolateral prefrontal cortex (dlPFC), a recently evolved brain region that subserves working memory, abstraction, and the thoughtful regulation of attention, action, and emotion. For example, schizophrenia, depression, long COVID, and Alzheimer's disease are all associated with dlPFC dysfunction, with neuropathology often being focused in layer III. The dlPFC has extensive top-down projections, e.g., to the posterior association cortices to regulate attention and to the subgenual cingulate cortex via the rostral and medial PFC to regulate emotional responses. However, the dlPFC is particularly dependent on arousal state and is very vulnerable to stress and inflammation, which are etiological and/or exacerbating factors for most mental disorders. The cellular mechanisms by which stress and inflammation impact the dlPFC are a topic of current research and are summarized in this review. For example, the layer III dlPFC circuits that generate working memory-related neuronal firing have unusual neurotransmission, depending on NMDA receptor and nicotinic α7 receptor actions that are blocked under inflammatory conditions by kynurenic acid. These circuits also have unusual neuromodulation, with the molecular machinery to magnify calcium signaling in spines needed to support persistent firing, which must be tightly regulated to prevent toxic calcium actions. Stress rapidly weakens layer III connectivity by driving feedforward calcium-cAMP (cyclic adenosine monophosphate) opening of potassium channels on spines. This is regulated by postsynaptic noradrenergic α adrenergic receptor and mGluR3 (metabotropic glutamate receptor 3) signaling but dysregulated by inflammation and/or chronic stress exposure, which contribute to spine loss. Treatments that strengthen the dlPFC via pharmacological (the α adrenergic receptor agonist, guanfacine) or repetitive transcranial magnetic stimulation manipulation provide a rational basis for therapy.

36Memory modulation.PubMed

Benno Roozendaal, James L McGaugh
Behav Neurosci. 2011 Dec;125(6):797-824. doi: 10.1037/a0026187.
Our memories are not all created equally strong: Some experiences are well remembered while others are remembered poorly, if at all. Research on memory modulation investigates the neurobiological processes and systems that contribute to such differences in the strength of our memories. Extensive evidence from both animal and human research indicates that emotionally significant experiences activate hormonal and brain systems that regulate the consolidation of newly acquired memories. These effects are integrated through noradrenergic activation of the basolateral amygdala that regulates memory consolidation via interactions with many other brain regions involved in consolidating memories of recent experiences. Modulatory systems not only influence neurobiological processes underlying the consolidation of new information, but also affect other mnemonic processes, including memory extinction, memory recall, and working memory. In contrast to their enhancing effects on consolidation, adrenal stress hormones impair memory retrieval and working memory. Such effects, as with memory consolidation, require noradrenergic activation of the basolateral amygdala and interactions with other brain regions.

37Stress, memory and the amygdala.PubMed

Benno Roozendaal, Bruce S McEwen, Sumantra Chattarji
Nat Rev Neurosci. 2009 Jun;10(6):423-33. doi: 10.1038/nrn2651.
Emotionally significant experiences tend to be well remembered, and the amygdala has a pivotal role in this process. But the efficient encoding of emotional memories can become maladaptive - severe stress often turns them into a source of chronic anxiety. Here, we review studies that have identified neural correlates of stress-induced modulation of amygdala structure and function - from cellular mechanisms to their behavioural consequences. The unique features of stress-induced plasticity in the amygdala, in association with changes in other brain regions, could have long-term consequences for cognitive performance and pathological anxiety exhibited in people with affective disorders.

38Stress and emotional memory: a matter of timing.PubMed

Marian Joëls, Guillen Fernandez, Benno Roozendaal
Trends Cogn Sci. 2011 Jun;15(6):280-8. doi: 10.1016/j.tics.2011.04.004. Epub 2011 May 14.
Stressful events activate the amygdala and a network of associated brain regions. Studies in both humans and rodents indicate that noradrenaline has a prominent role in this activation. Noradrenaline induces a hypervigilant state that helps to remember the event. This mnemonic effect is enhanced when the situation is so stressful that substantial amounts of corticosteroids are released and reach the amygdala. The combination of the two hormones leads to optimal strengthening of contacts and thus memory. Yet, rises in corticosteroid levels that are not precisely synchronized with noradrenaline release do not act synergistically but rather prevent or suppress the effect of noradrenaline. This dynamic interaction illustrates the adaptive and potentially protective capacity of corticosteroids regarding traumatic memories.

39Associative learning.PubMed

R F Thompson, S Bao, L Chen, et al.
Int Rev Neurobiol. 1997;41:151-89. doi: 10.1016/s0074-7742(08)60351-7.
This chapter reviews evidence demonstrating the essential role of the cerebellum and its associated circuitry in the learning and memory of classical conditioning of discrete behavioral responses (e.g., eyeblink, limb flexion, head turn). It now seems conclusive that the memory traces for this basic category of associative learning are formed and stored in the cerebellum. Lesion, neuronal recording, electrical microstimulation, and anatomical procedures have been used to identify the essential conditioned stimulus (CS) circuit, including the pontine mossy fiber projections to the cerebellum; the essential unconditioned stimulus (US) reinforcing or teaching circuit, including neurons in the inferior olive (dorsal accessory olive) projecting to the cerebellum as climbing fibers; and the essential conditioned response (CR) circuit, including the interpositus nucleus, its projection via the superior cerebellar peduncle to the magnocellular red nucleus, and rubral projections to premotor and motor nuclei. Each major component of the eyeblink CR circuit was reversibly inactivated both in trained animals and over the course of training. In all cases in trained animals, inactivation abolished the CR (and the UR as well when motor nuclei were inactivated). When animals were trained during inactivation (and not exhibiting CRs) and then tested without inactivation, animals with inactivation of the motor nuclei, red nucleus, and superior peduncle had fully learned, whereas animals with inactivation of a very localized region of the cerebellum (anterior interpositus and overlying cortex) had not learned at all. Consequently, the memory traces are formed and stored in the cerebellum. Several alternative possibilities are considered and ruled out. Both the cerebellar cortex and the interpositus nucleus are involved in the memory storage process, suggesting that a phenomenon-like long-term depression (LTD) is involved in the cerebellar cortex and long-term potentiation (LTP) is involved in the interpositus. The experimental findings reviewed in this chapter provide perhaps the first conclusive evidence for the localization of a basic form of memory storage to a particular brain region, namely the cerebellum, and indicate that the cerebellum is indeed a cognitive machine.

40Intact procedural memory and impaired auditory statistical learning in adults with dyslexia.PubMed

Ola Ozernov-Palchik, Zhenghan Qi, Sara D Beach, et al.
Neuropsychologia. 2023 Sep 9;188:108638. doi: 10.1016/j.neuropsychologia.2023.108638. Epub 2023 Jul 28.
Developmental dyslexia is a reading disorder that is associated with atypical brain function. One neuropsychological theory posits that dyslexia reflects a deficit in the procedural memory system, which supports implicit learning, or the acquisition of knowledge without conscious awareness or intention. This study investigated various forms of procedural learning in adults with dyslexia and typically-reading adults. Adults with dyslexia exhibited typical skill learning on mirror tracing and rotary pursuit tasks that have been well-established as reflecting purely procedural memory and dependent on basal ganglia and cerebellar structures. They also exhibited typical statistical learning for visual material, but impaired statistical learning for auditory material. Auditory statistical learning proficiency correlated positively with single-word reading performance across all participants and within the group with dyslexia, linking a major difficulty in dyslexia with impaired auditory statistical learning. These findings dissociate multiple forms of procedural memory that are intact in dyslexia from a specific impairment in auditory statistical learning that is associated with reading difficulty.

41Current perspectives on the cerebellum and reading development.PubMed

Travis A Alvarez, Julie A Fiez
Neurosci Biobehav Rev. 2018 Sep;92:55-66. doi: 10.1016/j.neubiorev.2018.05.006. Epub 2018 May 3.
The dominant neural models of typical and atypical reading focus on the cerebral cortex. However, Nicolson et al. (2001) proposed a model, the cerebellar deficit hypothesis, in which the cerebellum plays an important role in reading. To evaluate the evidence in support of this model, we qualitatively review the current literature and employ meta-analytic tools examining patterns of functional connectivity between the cerebellum and the cerebral reading network. We find evidence for a phonological circuit with connectivity between the cerebellum and a dorsal fronto-parietal pathway, and a semantic circuit with cerebellar connectivity to a ventral fronto-temporal pathway. Furthermore, both cerebral pathways have functional connections with the mid-fusiform gyrus, a region implicated in orthographic processing. Consideration of these circuits within the context of the current literature suggests the cerebellum is positioned to influence both phonological and word-based decoding procedures for recognizing unfamiliar printed words. Overall, multiple lines of research provide support for the cerebellar deficit hypothesis, while also highlighting the need for further research to test mechanistic hypotheses.

42Memory systems.PubMed

Howard Eichenbaum
Wiley Interdiscip Rev Cogn Sci. 2010 Jul;1(4):478-490. doi: 10.1002/wcs.49. Epub 2010 Mar 22.
The idea that there are multiple memory systems can be traced to early philosophical considerations and introspection. However, the early experimental work considered memory a unitary phenomenon and focused on finding the mechanism upon which memory is based. A full reconciliation of debates about that mechanism, and a coincidental rediscovery of the idea of multiple memory systems, emerged from studies in the cognitive neuroscience of memory. This research has identified three major forms of memory that have distinct operating principles and are supported by different brain systems. These include: (1) a cortical-hippocampal circuit that mediates declarative memory, our capacity to recollect facts and events; (2) procedural memory subsystems involving a cortical-striatal circuit that mediates habit formation and a brainstem-cerebellar circuit that mediates sensorimotor adaptations; and (3) a circuit involving subcortical and cortical pathways through the amygdala that mediates the attachment of affective status and emotional responses to previously neutral stimuli. Copyright © 2010 John Wiley & Sons, Ltd. For further resources related to this article, please visit the WIREs website.

43Is plasticity of synapses the mechanism of long-term memory storage?PubMed

Wickliffe C Abraham, Owen D Jones, David L Glanzman
NPJ Sci Learn. 2019 Jul 2;4:9. doi: 10.1038/s41539-019-0048-y. eCollection 2019.
It has been 70 years since Donald Hebb published his formalized theory of synaptic adaptation during learning. Hebb's seminal work foreshadowed some of the great neuroscientific discoveries of the following decades, including the discovery of long-term potentiation and other lasting forms of synaptic plasticity, and more recently the residence of memories in synaptically connected neuronal assemblies. Our understanding of the processes underlying learning and memory has been dominated by the view that synapses are the principal site of information storage in the brain. This view has received substantial support from research in several model systems, with the vast majority of studies on the topic corroborating a role for synapses in memory storage. Yet, despite the neuroscience community's best efforts, we are still without conclusive proof that memories reside at synapses. Furthermore, an increasing number of non-synaptic mechanisms have emerged that are also capable of acting as memory substrates. In this review, we address the key findings from the synaptic plasticity literature that make these phenomena such attractive memory mechanisms. We then turn our attention to evidence that questions the reliance of memory exclusively on changes at the synapse and attempt to integrate these opposing views.

44Interregional synaptic maps among engram cells underlie memory formation.PubMed

Jun-Hyeok Choi, Su-Eon Sim, Ji-Il Kim, et al.
Science. 2018 Apr 27;360(6387):430-435. doi: 10.1126/science.aas9204.
Memory resides in engram cells distributed across the brain. However, the site-specific substrate within these engram cells remains theoretical, even though it is generally accepted that synaptic plasticity encodes memories. We developed the dual-eGRASP (green fluorescent protein reconstitution across synaptic partners) technique to examine synapses between engram cells to identify the specific neuronal site for memory storage. We found an increased number and size of spines on CA1 engram cells receiving input from CA3 engram cells. In contextual fear conditioning, this enhanced connectivity between engram cells encoded memory strength. CA3 engram to CA1 engram projections strongly occluded long-term potentiation. These results indicate that enhanced structural and functional connectivity between engram cells across two directly connected brain regions forms the synaptic correlate for memory formation.

45LTP or LTD? Modeling the Influence of Stress on Synaptic Plasticity.PubMed

Achim Peters, Cordula Reisch, Dirk Langemann
eNeuro. 2018 Apr 6;5(1). doi: 10.1523/ENEURO.0242-17.2018. eCollection 2018 Jan-Feb.
In cognitive memory, long-term potentiation (LTP) has been shown to occur when presynaptic and postsynaptic activities are highly correlated and glucocorticoid concentrations are in an optimal (i.e., low normal) range. In all other conditions, LTP is attenuated or even long-term depression (LTD) occurs. In this paper, we focus on NMDA receptor (NMDA-R)-dependent LTP and LTD, two processes involving various molecular mechanisms. To understand which of these mechanisms are indispensable for explaining the experimental evidence reported in the literature, we here propose a parsimonious model of NMDA-R-dependent synaptic plasticity. Central to this model are two processes. First, AMPA receptor-subunit trafficking; and second, glucocorticoid-dependent modifications of the brain-derived neurotrophic factor (BDNF)-receptor system. In 2008, we have published a core model, which contained the first process, while in the current paper we present an extended model, which also includes the second process. Using the extended model, we could show that stress attenuates LTP, while it enhances LTD. These simulation results are in agreement with experimental findings from other labs. In 2013, surprising experimental evidence showed that the GluA1 C-tail is unnecessary for LTP. When using our core model in its original form, our simulations already predicted that there would be no requirement for the GluA1 C-tail for LTP, allowing to eliminate a redundant mechanism from our model. In summary, we present a mathematical model that displays reduced complexity and is useful for explaining when and how LTP or LTD occurs at synapses during cognitive memory formation.

46Roles of palmitoylation in structural long-term synaptic plasticity.PubMed

Benjun Ji, Małgorzata Skup
Mol Brain. 2021 Jan 11;14(1):8. doi: 10.1186/s13041-020-00717-y.
Long-term potentiation (LTP) and long-term depression (LTD) are important cellular mechanisms underlying learning and memory processes. N-Methyl-D-aspartate receptor (NMDAR)-dependent LTP and LTD play especially crucial roles in these functions, and their expression depends on changes in the number and single channel conductance of the major ionotropic glutamate receptor α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR) located on the postsynaptic membrane. Structural changes in dendritic spines comprise the morphological platform and support for molecular changes in the execution of synaptic plasticity and memory storage. At the molecular level, spine morphology is directly determined by actin cytoskeleton organization within the spine and indirectly stabilized and consolidated by scaffold proteins at the spine head. Palmitoylation, as a uniquely reversible lipid modification with the ability to regulate protein membrane localization and trafficking, plays significant roles in the structural and functional regulation of LTP and LTD. Altered structural plasticity of dendritic spines is also considered a hallmark of neurodevelopmental disorders, while genetic evidence strongly links abnormal brain function to impaired palmitoylation. Numerous studies have indicated that palmitoylation contributes to morphological spine modifications. In this review, we have gathered data showing that the regulatory proteins that modulate the actin network and scaffold proteins related to AMPAR-mediated neurotransmission also undergo palmitoylation and play roles in modifying spine architecture during structural plasticity.

47Revisiting the flip side: Long-term depression of synaptic efficacy in the hippocampus.PubMed

Cristina Pinar, Christine J Fontaine, Juan Triviño-Paredes, et al.
Neurosci Biobehav Rev. 2017 Sep;80:394-413. doi: 10.1016/j.neubiorev.2017.06.001. Epub 2017 Jun 15.
Synaptic plasticity is widely regarded as a putative biological substrate for learning and memory processes. While both decreases and increases in synaptic strength are seen as playing a role in learning and memory, long-term depression (LTD) of synaptic efficacy has received far less attention than its counterpart long-term potentiation (LTP). Never-the-less, LTD at synapses can play an important role in increasing computational flexibility in neural networks. In addition, like learning and memory processes, the magnitude of LTD can be modulated by factors that include stress and sex hormones, neurotrophic support, learning environments, and age. Examining how these factors modulate hippocampal LTD can provide the means to better elucidate the molecular underpinnings of learning and memory processes. This is in turn will enhance our appreciation of how both increases and decreases in synaptic plasticity can play a role in different neurodevelopmental and neurodegenerative conditions.

48A Place at the Table: LTD as a Mediator of Memory Genesis.PubMed

Steven A Connor, Yu Tian Wang
Neuroscientist. 2016 Aug;22(4):359-71. doi: 10.1177/1073858415588498. Epub 2015 May 20.
Resolving how our brains encode information requires an understanding of the cellular processes taking place during memory formation. Since the 1970s, considerable effort has focused on determining the properties and mechanisms underlying long-term potentiation (LTP) at glutamatergic synapses and how these processes influence initiation of new memories. However, accumulating evidence suggests that long-term depression (LTD) of synaptic strength, particularly at glutamatergic synapses, is a bona fide learning and memory mechanism in the mammalian brain. The known range of mechanisms capable of inducing LTD has been extended to those including NMDAR-independent forms, neuromodulator-dependent LTD, synaptic depression following stress, and non-synaptically induced forms. The examples of LTD observed at the hippocampal CA1 synapse to date demonstrate features consistent with LTP, including homo- and heterosynaptic expression, extended duration beyond induction (several hours to weeks), and association with encoding of distinct types of memories. Canonical mechanisms through which synapses undergo LTD include activation of phosphatases, initiation of protein synthesis, and dynamic regulation of presynaptic glutamate release and/or postsynaptic glutamate receptor endocytosis. Here, we will discuss the pre- and postsynaptic changes underlying LTD, recent advances in the identification and characterization of novel mechanisms underlying LTD, and how engagement of these processes constitutes a cellular analog for the genesis of specific types of memories.

49Adult neurogenesis: beyond learning and memory.PubMed

Heather A Cameron, Lucas R Glover
Annu Rev Psychol. 2015 Jan 3;66:53-81. doi: 10.1146/annurev-psych-010814-015006. Epub 2014 Sep 19.
New neurons continue to be generated in the dentate gyrus throughout life, providing this region of the hippocampus with exceptional structural plasticity, but the function of this ongoing neurogenesis is unknown. Inhibition of adult neurogenesis produces some behavioral impairments that suggest a role for new neurons in learning and memory; however, other behavioral changes appear inconsistent with this function. A review of studies investigating the function of the hippocampus going back several decades reveals many ideas that seem to converge on a critical role for the hippocampus in stress response and emotion. These potential hippocampal functions provide new avenues for investigating the behavioral functions of adult neurogenesis. And, conversely, studies in animals lacking adult neurogenesis, which are likely to have more limited and more specific impairments than are seen with lesions, may provide valuable new insights into the function of the hippocampus. A complete understanding of the function of the hippocampus must explain its role in emotion and the relationship between its emotional and memory functions.

50Adult hippocampal neurogenesis and its impairment in Alzheimer's disease.PubMed

Thomas A Kim, Michelle D Syty, Kaitlyn Wu, et al.
Zool Res. 2022 May 18;43(3):481-496. doi: 10.24272/j.issn.2095-8137.2021.479.
Adult neurogenesis is the creation of new neurons which integrate into the existing neural circuit of the adult brain. Recent evidence suggests that adult hippocampal neurogenesis (AHN) persists throughout life in mammals, including humans. These newborn neurons have been implicated to have a crucial role in brain functions such as learning and memory. Importantly, studies have also found that hippocampal neurogenesis is impaired in neurodegenerative and neuropsychiatric diseases. Alzheimer's disease (AD) is one of the most common forms of dementia affecting millions of people. Cognitive dysfunction is a common symptom of AD patients and progressive memory loss has been attributed to the degeneration of the hippocampus. Therefore, there has been growing interest in identifying how hippocampal neurogenesis is affected in AD. However, the link between cognitive decline and changes in hippocampal neurogenesis in AD is poorly understood. In this review, we summarized the recent literature on AHN and its impairments in AD.

51The role of adult hippocampal neurogenesis in brain health and disease.PubMed

Tomohisa Toda, Sarah L Parylak, Sara B Linker, et al.
Mol Psychiatry. 2019 Jan;24(1):67-87. doi: 10.1038/s41380-018-0036-2. Epub 2018 Apr 20.
Adult neurogenesis in the dentate gyrus of the hippocampus is highly regulated by a number of environmental and cell-intrinsic factors to adapt to environmental changes. Accumulating evidence suggests that adult-born neurons may play distinct physiological roles in hippocampus-dependent functions, such as memory encoding and mood regulation. In addition, several brain diseases, such as neurological diseases and mood disorders, have deleterious effects on adult hippocampal neurogenesis, and some symptoms of those diseases can be partially explained by the dysregulation of adult hippocampal neurogenesis. Here we review a possible link between the physiological functions of adult-born neurons and their roles in pathological conditions.

52Adult hippocampal neurogenesis and cognitive flexibility - linking memory and mood.PubMed

Christoph Anacker, René Hen
Nat Rev Neurosci. 2017 Jun;18(6):335-346. doi: 10.1038/nrn.2017.45. Epub 2017 May 4.
Adult hippocampal neurogenesis has been implicated in cognitive processes, such as pattern separation, and in the behavioural effects of stress and antidepressants. Young adult-born neurons have been shown to inhibit the overall activity of the dentate gyrus by recruiting local interneurons, which may result in sparse contextual representations and improved pattern separation. We propose that neurogenesis-mediated inhibition also reduces memory interference and enables reversal learning both in neutral situations and in emotionally charged ones. Such improved cognitive flexibility may in turn help to decrease anxiety-like and depressive-like behaviour.

53Hippocampal neurogenesis regulates forgetting during adulthood and infancy.PubMed

Katherine G Akers, Alonso Martinez-Canabal, Leonardo Restivo, et al.
Science. 2014 May 9;344(6184):598-602. doi: 10.1126/science.1248903.
Throughout life, new neurons are continuously added to the dentate gyrus. As this continuous addition remodels hippocampal circuits, computational models predict that neurogenesis leads to degradation or forgetting of established memories. Consistent with this, increasing neurogenesis after the formation of a memory was sufficient to induce forgetting in adult mice. By contrast, during infancy, when hippocampal neurogenesis levels are high and freshly generated memories tend to be rapidly forgotten (infantile amnesia), decreasing neurogenesis after memory formation mitigated forgetting. In precocial species, including guinea pigs and degus, most granule cells are generated prenatally. Consistent with reduced levels of postnatal hippocampal neurogenesis, infant guinea pigs and degus did not exhibit forgetting. However, increasing neurogenesis after memory formation induced infantile amnesia in these species.

54Adult hippocampal neurogenesis is abundant in neurologically healthy subjects and drops sharply in patients with Alzheimer's disease.PubMed

Elena P Moreno-Jiménez, Miguel Flor-García, Julia Terreros-Roncal, et al.
Nat Med. 2019 Apr;25(4):554-560. doi: 10.1038/s41591-019-0375-9. Epub 2019 Mar 25.
The hippocampus is one of the most affected areas in Alzheimer's disease (AD). Moreover, this structure hosts one of the most unique phenomena of the adult mammalian brain, namely, the addition of new neurons throughout life. This process, called adult hippocampal neurogenesis (AHN), confers an unparalleled degree of plasticity to the entire hippocampal circuitry. Nonetheless, direct evidence of AHN in humans has remained elusive. Thus, determining whether new neurons are continuously incorporated into the human dentate gyrus (DG) during physiological and pathological aging is a crucial question with outstanding therapeutic potential. By combining human brain samples obtained under tightly controlled conditions and state-of-the-art tissue processing methods, we identified thousands of immature neurons in the DG of neurologically healthy human subjects up to the ninth decade of life. These neurons exhibited variable degrees of maturation along differentiation stages of AHN. In sharp contrast, the number and maturation of these neurons progressively declined as AD advanced. These results demonstrate the persistence of AHN during both physiological and pathological aging in humans and provide evidence for impaired neurogenesis as a potentially relevant mechanism underlying memory deficits in AD that might be amenable to novel therapeutic strategies.

55Reinstatement and transformation of memory traces for recognition.PubMed

Elias M B Rau, Marie-Christin Fellner, Rebekka Heinen, et al.
Sci Adv. 2025 Feb 21;11(8):eadp9336. doi: 10.1126/sciadv.adp9336. Epub 2025 Feb 19.
Episodic memory relies on the formation and retrieval of content-specific memory traces. In addition to their veridical reactivation, previous studies have indicated that traces may undergo substantial transformations. However, the exact time course and regional distribution of reinstatement and transformation during recognition memory have remained unclear. We applied representational similarity analysis to human intracranial electroencephalography to track the spatiotemporal dynamics underlying the reinstatement and transformation of memory traces. Specifically, we examined how reinstatement and transformation of item-specific representations across occipital, ventral visual, and lateral parietal cortices contribute to successful memory formation and recognition. Our findings suggest that reinstatement in temporal cortex and transformation in parietal cortex coexist and provide complementary strategies for recognition. Further, we find that generalization and differentiation of neural representations contribute to memory and probe memory-specific correspondence with deep neural network (DNN) model features. Our results suggest that memory formation is particularly supported by generalized and mnemonic representational formats beyond the visual features of a DNN.

56Computational models of memory consolidation and long-term synaptic plasticity during sleep.PubMed

César Rennó-Costa, Ana Cláudia Costa da Silva, Wilfredo Blanco, et al.
Neurobiol Learn Mem. 2019 Apr;160:32-47. doi: 10.1016/j.nlm.2018.10.003. Epub 2018 Oct 12.
The brain stores memories by persistently changing the connectivity between neurons. Sleep is known to be critical for these changes to endure. Research on the neurobiology of sleep and the mechanisms of long-term synaptic plasticity has provided data in support of various theories of how brain activity during sleep affects long-term synaptic plasticity. The experimental findings - and therefore the theories - are apparently quite contradictory, with some evidence pointing to a role of sleep in the forgetting of irrelevant memories, whereas other results indicate that sleep supports the reinforcement of the most valuable recollections. A unified theoretical framework is in need. Computational modeling and simulation provide grounds for the quantitative testing and comparison of theoretical predictions and observed data, and might serve as a strategy to organize the rather complicated and diverse pool of data and methodologies used in sleep research. This review article outlines the emerging progress in the computational modeling and simulation of the main theories on the role of sleep in memory consolidation.

57Fear conditioning and the basolateral amygdala.PubMed

Yajie Sun, Helen Gooch, Pankaj Sah
F1000Res. 2020 Jan 28;9. doi: 10.12688/f1000research.21201.1. eCollection 2020.
Fear is a response to impending threat that prepares a subject to make appropriate defensive responses, whether to freeze, fight, or flee to safety. The neural circuits that underpin how subjects learn about cues that signal threat, and make defensive responses, have been studied using Pavlovian fear conditioning in laboratory rodents as well as humans. These studies have established the amygdala as a key player in the circuits that process fear and led to a model where fear learning results from long-term potentiation of inputs that convey information about the conditioned stimulus to the amygdala. In this review, we describe the circuits in the basolateral amygdala that mediate fear learning and its expression as the conditioned response. We argue that while the evidence linking synaptic plasticity in the basolateral amygdala to fear learning is strong, there is still no mechanism that fully explains the changes that underpin fear conditioning.

58Hypothalamic modulation of adult hippocampal neurogenesis in mice confers activity-dependent regulation of memory and anxiety-like behavior.PubMed

Ya-Dong Li, Yan-Jia Luo, Ze-Ka Chen, et al.
Nat Neurosci. 2022 May;25(5):630-645. doi: 10.1038/s41593-022-01065-x. Epub 2022 May 6.
Adult hippocampal neurogenesis plays a critical role in memory and emotion processing, and this process is dynamically regulated by neural circuit activity. However, it remains unknown whether manipulation of neural circuit activity can achieve sufficient neurogenic effects to modulate behavior. Here we report that chronic patterned optogenetic stimulation of supramammillary nucleus (SuM) neurons in the mouse hypothalamus robustly promotes neurogenesis at multiple stages, leading to increased production of neural stem cells and behaviorally relevant adult-born neurons (ABNs) with enhanced maturity. Functionally, selective manipulation of the activity of these SuM-promoted ABNs modulates memory retrieval and anxiety-like behaviors. Furthermore, we show that SuM neurons are highly responsive to environmental novelty (EN) and are required for EN-induced enhancement of neurogenesis. Moreover, SuM is required for ABN activity-dependent behavioral modulation under a novel environment. Our study identifies a key hypothalamic circuit that couples novelty signals to the production and maturation of ABNs, and highlights the activity-dependent contribution of circuit-modified ABNs in behavioral regulation.

59Age-related shift in LTD is dependent on neuronal adenosine A receptors interplay with mGluR5 and NMDA receptors.PubMed

Mariana Temido-Ferreira, Diana G Ferreira, Vânia L Batalha, et al.
Mol Psychiatry. 2020 Aug;25(8):1876-1900. doi: 10.1038/s41380-018-0110-9. Epub 2018 Jun 27.
Synaptic dysfunction plays a central role in Alzheimer's disease (AD), since it drives the cognitive decline. An association between a polymorphism of the adenosine A receptor (AR) encoding gene-ADORA2A, and hippocampal volume in AD patients was recently described. In this study, we explore the synaptic function of AR in age-related conditions. We report, for the first time, a significant overexpression of AR in hippocampal neurons of aged humans, which is aggravated in AD patients. A similar profile of AR overexpression in rats was sufficient to drive age-like memory impairments in young animals and to uncover a hippocampal LTD-to-LTP shift. This was accompanied by increased NMDA receptor gating, dependent on mGluR5 and linked to enhanced Ca influx. We confirmed the same plasticity shift in memory-impaired aged rats and APP/PS1 mice modeling AD, which was rescued upon AR blockade. This AR/mGluR5/NMDAR interaction might prove a suitable alternative for regulating aberrant mGluR5/NMDAR signaling in AD without disrupting their constitutive activity.

60Gene knockout of glycine transporter 1: characterization of the behavioral phenotype.PubMed

Guochuan Tsai, Rebecca J Ralph-Williams, Marzia Martina, et al.
Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8485-90. doi: 10.1073/pnas.0402662101. Epub 2004 May 24.
N-methyl-d-aspartate receptor (NMDAR) activation requires both the binding of glutamate to its recognition site and occupancy of the strychnine insensitive glycine modulatory site (GMS). Pharmacological studies suggest that the glycine transporter, GlyT1, maintains subsaturating concentrations of glycine at synaptic NMDARs. To characterize further the role of GlyT1, we generated mice in which the gene encoding GlyT1 was inactivated by homologous recombination through insertion of a PGK-Neo cassette in place of exons 2 and 3. Real-time quantitative PCR revealed no transcripts in newborn homozygous [GlyT1(-/-)] mice and a 50% reduction in heterozygous (HZ) [GlyT1(+/-)] mice as compared with WT littermates. The activity of Na(+)-dependent glycine transport in forebrain homogenates was similarly affected. Homozygous mice died within 12 h of birth. In acute hippocampal slices, exogenous glycine or d-serine (10 microM) enhanced NMDAR currents with Schaffer collateral stimulation in WT mice but not HZ mice, suggesting that the GMS was more occupied in the latter. The NMDAR/alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor ratio of the excitatory postsynaptic currents was significantly increased in the HZ mice. In the water maze, the HZ mice exhibited better spatial retention. Furthermore, HZ mice were less sensitive to an amphetamine disruption of prepulse inhibition than WT mice but were more sensitive to the effects of MK-801. Thus, reduced expression of GlyT1 enhances hippocampal NMDAR function and memory retention and protects against an amphetamine disruption of sensory gating, suggesting that drugs which inhibit GlyT1 might have both cognitive enhancing and antipsychotic effects.

61BDNF-induced local protein synthesis and synaptic plasticity.PubMed

Graciano Leal, Diogo Comprido, Carlos B Duarte
Neuropharmacology. 2014 Jan;76 Pt C:639-56. doi: 10.1016/j.neuropharm.2013.04.005. Epub 2013 Apr 16.
Brain-derived neurotrophic factor (BDNF) is an important regulator of synaptic transmission and long-term potentiation (LTP) in the hippocampus and in other brain regions, playing a role in the formation of certain forms of memory. The effects of BDNF in LTP are mediated by TrkB (tropomyosin-related kinase B) receptors, which are known to be coupled to the activation of the Ras/ERK, phosphatidylinositol 3-kinase/Akt and phospholipase C-γ (PLC-γ) pathways. The role of BDNF in LTP is best studied in the hippocampus, where the neurotrophin acts at pre- and post-synaptic levels. Recent studies have shown that BDNF regulates the transport of mRNAs along dendrites and their translation at the synapse, by modulating the initiation and elongation phases of protein synthesis, and by acting on specific miRNAs. Furthermore, the effect of BDNF on transcription regulation may further contribute to long-term changes in the synaptic proteome. In this review we discuss the recent progress in understanding the mechanisms contributing to the short- and long-term regulation of the synaptic proteome by BDNF, and the role in synaptic plasticity, which is likely to influence learning and memory formation. This article is part of the Special Issue entitled 'BDNF Regulation of Synaptic Structure, Function, and Plasticity'.

62BDNF and synaptic plasticity, cognitive function, and dysfunction.PubMed

B Lu, G Nagappan, Y Lu
Handb Exp Pharmacol. 2014;220:223-50. doi: 10.1007/978-3-642-45106-5_9.
Among all neurotrophins, brain-derived neurotrophic factor (BDNF) stands out for its high level of expression in the brain and its potent effects on synapses. It is now widely accepted that the main function of BDNF in the adult brain is to regulate synapses, with structural and functional effects ranging from short-term to long-lasting, on excitatory or inhibitory synapses, in many brain regions. The diverse effects of BDNF on brain synapses stem from its complex downstream signaling cascades, as well as the diametrically opposing effects of the pro- and mature form through distinct receptors, TrkB and p75(NTR). Many aspects of BDNF cell biology are regulated by neuronal activity. The synergistic interactions between neuronal activity and synaptic plasticity by BDNF make it an ideal and essential regulator of cellular processes that underlie cognition and other complex behaviors. Indeed, numerous studies firmly established that BDNF plays a critical role in hippocampal long-term potentiation (LTP), a long-term enhancement of synaptic efficacy thought to underlie learning and memory. Converging evidence now strongly suggest that deficits in BDNF signaling contribute to the pathogenesis of several major diseases and disorders such as Huntington's disease, Alzheimer's disease, and depression. Thus, manipulating BDNF pathways represents a viable treatment approach to a variety of neurological and psychiatric disorders.

63BDNF: A Key Factor with Multipotent Impact on Brain Signaling and Synaptic Plasticity.PubMed

Przemysław Kowiański, Grażyna Lietzau, Ewelina Czuba, et al.
Cell Mol Neurobiol. 2018 Apr;38(3):579-593. doi: 10.1007/s10571-017-0510-4. Epub 2017 Jun 16.
Brain-derived neurotrophic factor (BDNF) is one of the most widely distributed and extensively studied neurotrophins in the mammalian brain. Among its prominent functions, one can mention control of neuronal and glial development, neuroprotection, and modulation of both short- and long-lasting synaptic interactions, which are critical for cognition and memory. A wide spectrum of processes are controlled by BDNF, and the sometimes contradictory effects of its action can be explained based on its specific pattern of synthesis, comprising several intermediate biologically active isoforms that bind to different types of receptor, triggering several signaling pathways. The functions of BDNF must be discussed in close relation to the stage of brain development, the different cellular components of nervous tissue, as well as the molecular mechanisms of signal transduction activated under physiological and pathological conditions. In this review, we briefly summarize the current state of knowledge regarding the impact of BDNF on regulation of neurophysiological processes. The importance of BDNF for future studies aimed at disclosing mechanisms of activation of signaling pathways, neuro- and gliogenesis, as well as synaptic plasticity is highlighted.

64Promoting neuroplasticity for motor rehabilitation after stroke: considering the effects of aerobic exercise and genetic variation on brain-derived neurotrophic factor.PubMed

Cameron S Mang, Kristin L Campbell, Colin J D Ross, et al.
Phys Ther. 2013 Dec;93(12):1707-16. doi: 10.2522/ptj.20130053. Epub 2013 Aug 1.
Recovery of motor function after stroke involves relearning motor skills and is mediated by neuroplasticity. Recent research has focused on developing rehabilitation strategies that facilitate such neuroplasticity to maximize functional outcome poststroke. Although many molecular signaling pathways are involved, brain-derived neurotrophic factor (BDNF) has emerged as a key facilitator of neuroplasticity involved in motor learning and rehabilitation after stroke. Thus, rehabilitation strategies that optimize BDNF effects on neuroplasticity may be especially effective for improving motor function poststroke. Two potential poststroke rehabilitation strategies that consider the importance of BDNF are the use of aerobic exercise to enhance brain function and the incorporation of genetic information to individualize therapy. Converging evidence demonstrates that aerobic exercise increases BDNF production and consequently enhances learning and memory processes. Nevertheless, a common genetic variant reduces activity-dependent secretion of the BDNF protein. Thus, BDNF gene variation may affect response to motor rehabilitation training and potentially modulate the effects of aerobic exercise on neuroplasticity. This perspective article discusses evidence that aerobic exercise promotes neuroplasticity by increasing BDNF production and considers how aerobic exercise may facilitate the acquisition and retention of motor skills for poststroke rehabilitation. Next, the impact of the BDNF gene val66met polymorphism on motor learning and response to rehabilitation is explored. It is concluded that the effects of aerobic exercise on BDNF and motor learning may be better exploited if aerobic exercise is paired more closely in time with motor training. Additionally, information about BDNF genotype could provide insight into the type and magnitude of effects that aerobic exercise may have across individuals and potentially help guide an individualized prescription of aerobic exercise to enhance motor rehabilitation poststroke.

65Microglia promote learning-dependent synapse formation through brain-derived neurotrophic factor.PubMed

Christopher N Parkhurst, Guang Yang, Ipe Ninan, et al.
Cell. 2013 Dec 19;155(7):1596-609. doi: 10.1016/j.cell.2013.11.030.
Microglia are the resident macrophages of the CNS, and their functions have been extensively studied in various brain pathologies. The physiological roles of microglia in brain plasticity and function, however, remain unclear. To address this question, we generated CX3CR1(CreER) mice expressing tamoxifen-inducible Cre recombinase that allow for specific manipulation of gene function in microglia. Using CX3CR1(CreER) to drive diphtheria toxin receptor expression in microglia, we found that microglia could be specifically depleted from the brain upon diphtheria toxin administration. Mice depleted of microglia showed deficits in multiple learning tasks and a significant reduction in motor-learning-dependent synapse formation. Furthermore, Cre-dependent removal of brain-derived neurotrophic factor (BDNF) from microglia largely recapitulated the effects of microglia depletion. Microglial BDNF increases neuronal tropomyosin-related kinase receptor B phosphorylation, a key mediator of synaptic plasticity. Together, our findings reveal that microglia serve important physiological functions in learning and memory by promoting learning-related synapse formation through BDNF signaling.

66Lactate Mediates the Effects of Exercise on Learning and Memory through SIRT1-Dependent Activation of Hippocampal Brain-Derived Neurotrophic Factor (BDNF).PubMed

Lauretta El Hayek, Mohamad Khalifeh, Victor Zibara, et al.
J Neurosci. 2019 Mar 27;39(13):2369-2382. doi: 10.1523/JNEUROSCI.1661-18.2019. Epub 2019 Jan 28.
Exercise promotes learning and memory formation. These effects depend on increases in hippocampal BDNF, a growth factor associated with cognitive improvement and the alleviation of depression symptoms. Identifying molecules that are produced during exercise and that mediate hippocampal expression will allow us to harness the therapeutic potential of exercise. Here, we report that an endogenous molecule produced during exercise in male mice induces the gene and promotes learning and memory formation. The metabolite lactate, which is released during exercise by the muscles, crosses the blood-brain barrier and induces expression and TRKB signaling in the hippocampus. Indeed, we find that lactate-dependent increases in BDNF are associated with improved spatial learning and memory retention. The action of lactate is dependent on the activation of the Sirtuin1 deacetylase. SIRT1 increases the levels of the transcriptional coactivator PGC1a and the secreted molecule FNDC5, known to mediate expression. These results reveal an endogenous mechanism to explain how physical exercise leads to the induction of BDNF, and identify lactate as a potential endogenous molecule that may have therapeutic value for CNS diseases in which BDNF signaling is disrupted. It is established that exercise promotes learning and memory formation and alleviates the symptoms of depression. These effects are mediated through inducing expression and signaling in the hippocampus. Understanding how exercise induces and identifying the molecules that mediate this induction will allow us to design therapeutic strategies that can mimic the effects of exercise on the brain, especially for patients with CNS disorders characterized by a decrease in expression and who cannot exercise because of their conditions. We identify lactate as an endogenous metabolite that is produced during exercise, crosses the blood-brain barrier and promotes hippocampal dependent learning and memory in a BDNF-dependent manner. Our work identifies lactate as a component of the "exercise pill."

67Glucosamine Enhancement of BDNF Expression and Animal Cognitive Function.PubMed

Lien-Yu Chou, Yu-Ming Chao, Yen-Chun Peng, et al.
Molecules. 2020 Aug 12;25(16):3667. doi: 10.3390/molecules25163667.
Brain-derived neurotrophic factor (BDNF) is an important factor for memory consolidation and cognitive function. Protein kinase A (PKA) signaling interacts significantly with BDNF-provoked downstream signaling. Glucosamine (GLN), a common dietary supplement, has been demonstrated to perform a variety of beneficial physiological functions. In the current study, an in vivo model of 7-week-old C57BL/6 mice receiving daily intraperitoneal injection of GLN (0, 3, 10 and 30 mg/animal) was subjected to the novel object recognition test in order to determine cognitive performance. GLN significantly increased cognitive function. In the hippocampus GLN elevated tissue cAMP concentrations and CREB phosphorylation, and upregulated the expression of BDNF, CREB5 and the BDNF receptor TrkB, but it reduced PDE4B expression. With the in vitro model in the HT22 hippocampal cell line, GLN exposure significantly increased protein and mRNA levels of BDNF and CREB5 and induced cAMP responsive element (CRE) reporter activity; the GLN-mediated BDNF expression and CRE reporter induction were suppressed by PKA inhibitor H89. Our current findings suggest that GLN can exert a cognition-enhancing function and this may act at least in part by upregulating the BDNF levels via a cAMP/PKA/CREB-dependent pathway.

68Initiated by CREB: Resolving Gene Regulatory Programs in Learning and Memory: Switch in Cofactors and Transcription Regulators between Memory Consolidation and Maintenance Network.PubMed

Jenifer C Kaldun, Simon G Sprecher
Bioessays. 2019 Aug;41(8):e1900045. doi: 10.1002/bies.201900045. Epub 2019 Jun 25.
Consolidation of long-term memory is a highly and precisely regulated multistep process. The transcription regulator cAMP response element-binding protein (CREB) plays a key role in initiating memory consolidation. With time processing, first the cofactors are changed and, secondly, CREB gets dispensable. This ultimately changes the expressed gene program to genes required to maintain the memory. Regulation of memory consolidation also requires epigenetic mechanisms and control at the RNA level. At the neuronal circuit level, oscillation in the activity of CREB and downstream factor define engram cells. Together the combination of all regulation mechanisms allows correct memory processing while keeping the process dynamic and flexible to adjust to different contexts. Also see the video abstract here https://youtu.be/BhSCSmorpEc.

69Nuclear calcium/calmodulin regulates memory consolidation.PubMed

Klara Limbäck-Stokin, Edward Korzus, Rie Nagaoka-Yasuda, et al.
J Neurosci. 2004 Dec 1;24(48):10858-67. doi: 10.1523/JNEUROSCI.1022-04.2004.
The neuronal response to a Ca2+ stimulus is a complex process involving direct Ca2+/calmodulin (CaM) actions as well as secondary activation of multiple signaling pathways such as cAMP and ERK (extracellular signal-regulated kinase). These signals can act in both the cytoplasm and the nucleus to control gene expression. To dissect the role of nuclear from cytoplasmic Ca2+/CaM signaling in memory formation, we generated transgenic mice that express a dominant inhibitor of Ca2+/CaM selectively in the nuclei of forebrain neurons and only after the animals reach adulthood. These mice showed diminished neuronal activity-induced phosphorylation of cAMP response element-binding protein, reduced expression of activity-induced genes, altered maximum levels of hippocampal long-term potentiation, and severely impaired formation of long-term, but not short-term, memory. Our results demonstrate that nuclear Ca2+/CaM signaling plays a critical role in memory consolidation in the mouse.

70Dynamic O-GlcNAc modification regulates CREB-mediated gene expression and memory formation.PubMed

Jessica E Rexach, Peter M Clark, Daniel E Mason, et al.
Nat Chem Biol. 2012 Jan 22;8(3):253-61. doi: 10.1038/nchembio.770.
The transcription factor cyclic AMP-response element binding protein (CREB) is a key regulator of many neuronal processes, including brain development, circadian rhythm and long-term memory. Studies of CREB have focused on its phosphorylation, although the diversity of CREB functions in the brain suggests additional forms of regulation. Here we expand on a chemoenzymatic strategy for quantifying glycosylation stoichiometries to characterize the functional roles of CREB glycosylation in neurons. We show that CREB is dynamically modified with an O-linked β-N-acetyl-D-glucosamine sugar in response to neuronal activity and that glycosylation represses CREB-dependent transcription by impairing its association with CREB-regulated transcription coactivator (CRTC; also known as transducer of regulated CREB activity). Blocking glycosylation of CREB alters cellular function and behavioral plasticity, enhancing both axonal and dendritic growth and long-term memory consolidation. Our findings demonstrate a new role for O-glycosylation in memory formation and provide a mechanistic understanding of how glycosylation contributes to critical neuronal functions. Moreover, we identify a previously unknown mechanism for the regulation of activity-dependent gene expression, neural development and memory.

71Epigenetic Mechanisms in Memory and Cognitive Decline Associated with Aging and Alzheimer's Disease.PubMed

Sabyasachi Maity, Kayla Farrell, Shaghayegh Navabpour, et al.
Int J Mol Sci. 2021 Nov 13;22(22):12280. doi: 10.3390/ijms222212280.
Epigenetic mechanisms, which include DNA methylation, a variety of post-translational modifications of histone proteins (acetylation, phosphorylation, methylation, ubiquitination, sumoylation, serotonylation, dopaminylation), chromatin remodeling enzymes, and long non-coding RNAs, are robust regulators of activity-dependent changes in gene transcription. In the brain, many of these epigenetic modifications have been widely implicated in synaptic plasticity and memory formation. Dysregulation of epigenetic mechanisms has been reported in the aged brain and is associated with or contributes to memory decline across the lifespan. Furthermore, alterations in the epigenome have been reported in neurodegenerative disorders, including Alzheimer's disease. Here, we review the diverse types of epigenetic modifications and their role in activity- and learning-dependent synaptic plasticity. We then discuss how these mechanisms become dysregulated across the lifespan and contribute to memory loss with age and in Alzheimer's disease. Collectively, the evidence reviewed here strongly supports a role for diverse epigenetic mechanisms in memory formation, aging, and neurodegeneration in the brain.

72Epigenetic mechanisms of memory formation and reconsolidation.PubMed

Timothy J Jarome, Farah D Lubin
Neurobiol Learn Mem. 2014 Nov;115:116-27. doi: 10.1016/j.nlm.2014.08.002. Epub 2014 Aug 15.
Memory consolidation involves transcriptional control of genes in neurons to stabilize a newly formed memory. Following retrieval, a once consolidated memory destabilizes and again requires gene transcription changes in order to restabilize, a process referred to as reconsolidation. Understanding the molecular mechanisms of gene transcription during the consolidation and reconsolidation processes could provide crucial insights into normal memory formation and memory dysfunction associated with psychiatric disorders. In the past decade, modifications of epigenetic markers such as DNA methylation and posttranslational modifications of histone proteins have emerged as critical transcriptional regulators of gene expression during initial memory formation and after retrieval. In light of the rapidly growing literature in this exciting area of research, we here examine the most recent and latest evidence demonstrating how memory acquisition and retrieval trigger epigenetic changes during the consolidation and reconsolidation phases to impact behavior. In particular we focus on the reconsolidation process, where we discuss the already identified epigenetic regulators of gene transcription during memory reconsolidation, while exploring other potential epigenetic modifications that may also be involved, and expand on how these epigenetic modifications may be precisely and temporally controlled by important signaling cascades critical to the reconsolidation process. Finally, we explore the possibility that epigenetic mechanisms may serve to regulate a system or circuit level reconsolidation process and may be involved in retrieval-dependent memory updating. Hence, we propose that epigenetic mechanisms coordinate changes in neuronal gene transcription, not only during the initial memory consolidation phase, but are triggered by retrieval to regulate molecular and cellular processes during memory reconsolidation.

73DNA methylation, histone acetylation in the regulation of memory and its modulation during aging.PubMed

Padmanabh Singh, Vijay Paramanik
Front Aging. 2025 Jan 6;5:1480932. doi: 10.3389/fragi.2024.1480932. eCollection 2024.
Memory formation is associated with constant modifications of neuronal networks and synaptic plasticity gene expression in response to different environmental stimuli and experiences. Dysregulation of synaptic plasticity gene expression affects memory during aging and neurodegenerative diseases. Covalent modifications such as methylation on DNA and acetylation on histones regulate the transcription of synaptic plasticity genes. Changes in these epigenetic marks correlated with alteration of synaptic plasticity gene expression and memory formation during aging. These epigenetic modifications, in turn, are regulated by physiology and metabolism. Steroid hormone estrogen and metabolites such as S-adenosyl methionine and acetyl CoA directly impact DNA and histones' methylation and acetylation levels. Thus, the decline of estrogen levels or imbalance of these metabolites affects gene expression and underlying brain functions. In the present review, we discussed the importance of DNA methylation and histone acetylation on chromatin modifications, regulation of synaptic plasticity gene expression and memory consolidation, and modulation of these epigenetic marks by epigenetic modifiers such as phytochemicals and vitamins. Further, understanding the molecular mechanisms that modulate these epigenetic modifications will help develop recovery approaches.

74Mapping the epigenomic and transcriptomic interplay during memory formation and recall in the hippocampal engram ensemble.PubMed

Asaf Marco, Hiruy S Meharena, Vishnu Dileep, et al.
Nat Neurosci. 2020 Dec;23(12):1606-1617. doi: 10.1038/s41593-020-00717-0. Epub 2020 Oct 5.
The epigenome and three-dimensional (3D) genomic architecture are emerging as key factors in the dynamic regulation of different transcriptional programs required for neuronal functions. In this study, we used an activity-dependent tagging system in mice to determine the epigenetic state, 3D genome architecture and transcriptional landscape of engram cells over the lifespan of memory formation and recall. Our findings reveal that memory encoding leads to an epigenetic priming event, marked by increased accessibility of enhancers without the corresponding transcriptional changes. Memory consolidation subsequently results in spatial reorganization of large chromatin segments and promoter-enhancer interactions. Finally, with reactivation, engram neurons use a subset of de novo long-range interactions, where primed enhancers are brought in contact with their respective promoters to upregulate genes involved in local protein translation in synaptic compartments. Collectively, our work elucidates the comprehensive transcriptional and epigenomic landscape across the lifespan of memory formation and recall in the hippocampal engram ensemble.

75DNA methylation patterns and epigenetic memory.PubMed

Adrian Bird
Genes Dev. 2002 Jan 1;16(1):6-21. doi: 10.1101/gad.947102.

76Turning over DNA methylation in the mind.PubMed

Ryan Lister, Eran A Mukamel
Front Neurosci. 2015 Jul 30;9:252. doi: 10.3389/fnins.2015.00252. eCollection 2015.
Cytosine DNA methylation is a stable epigenetic modification with established roles in regulating transcription, imprinting, female X-chromosome inactivation, and silencing of transposons. Dynamic gain or loss of DNA methylation reshapes the genomic landscape of cells during early differentiation, and in post-mitotic mammalian brain cells these changes continue to accumulate throughout the phases of cortical maturation in childhood and adolescence. There is also evidence for dynamic changes in the methylation status of specific genomic loci during the encoding of new memories, and these epigenome dynamics could play a causal role in memory formation. However, the mechanisms that may dynamically regulate DNA methylation in neurons during memory formation and expression, and the function of such epigenomic changes in this context, are unclear. Here we discuss the possible roles of DNA methylation in encoding and retrieval of memory.

77Epigenetic regulation of Dnmt3a and Arc gene expression after electroconvulsive stimulation in the rat.PubMed

Mads Dyrvig, Casper René Gøtzsche, David P D Woldbye, et al.
Mol Cell Neurosci. 2015 Jul;67:137-43. doi: 10.1016/j.mcn.2015.06.011. Epub 2015 Jun 30.
Electroconvulsive therapy (ECT) remains one of the most effective treatments of major depression. Unfortunately, some patients report side effects, of which the most prominent are memory deficits. The immediate early gene Arc plays a critical role in the maintenance phase of long-term potentiation and consolidation of memory in the rat brain. We recently observed increased methylation of the Arc promoter 24h after acute electroconvulsive stimulation (ECS) in rats, which could cause decreased Arc expression and provide an explanation for the observed memory deficits. In the present study we investigated the methylation and expression changes of Arc at 48h post-ECS and determined the role of de-novo methylation in that process. We initially measured expression of DNA methyltransferases (Dnmt1 and Dnmt3a) and Arc 1, 4, 8, 16, 24, and 48h after a single ECS. Arc expression increased approximately 10-fold at 1 and 4h after ECS, and subsequently decreased below sham levels. Four hours after ECS we also observed a significant increase in Dnmt3a expression, which was attenuated in a second experiment by the use of DNMT inhibitor decitabine (5-aza-2-deoxycytidine). We then investigated Arc gene expression and methylation changes at 48h post-ECS and we found a slightly reduced Arc expression in ECS-treated rats as compared to sham. In animals that received decitabine we observed a significant decrease in Dnmt3a expression and an increase of Arc expression in both ECS and sham groups. The same tendency for reduced Arc expression after ECS, as compared to sham was observed despite the blocking of DNA methylation with decitabine. The DNA methylation as measured by pyrosequencing is decreased 48h post-ECS both in the promoter and intragenic regions as a response to ECS regardless of the treatment with decitabine. Overall the results suggest that DNA methylation is involved in regulating Arc expression but is not the causal mechanism responsible for reducing Arc expression after ECS. We speculate that the decrease is caused by ECS-induced HDAC2 upregulation and decreased H3 acetylation at the Arc promoter.

78Epigenetic Changes in Alzheimer's Disease: DNA Methylation and Histone Modification.PubMed

Laura Maria De Plano, Alessandra Saitta, Salvatore Oddo, et al.
Cells. 2024 Apr 21;13(8):719. doi: 10.3390/cells13080719.
Alzheimer's disease (AD) is a devastating neurodegenerative disorder characterized by progressive cognitive decline and memory loss, imposing a significant burden on affected individuals and their families. Despite the recent promising progress in therapeutic approaches, more needs to be done to understand the intricate molecular mechanisms underlying the development and progression of AD. Growing evidence points to epigenetic changes as playing a pivotal role in the pathogenesis of the disease. The dynamic interplay between genetic and environmental factors influences the epigenetic landscape in AD, altering gene expression patterns associated with key pathological events associated with disease pathogenesis. To this end, epigenetic alterations not only impact the expression of genes implicated in AD pathogenesis but also contribute to the dysregulation of crucial cellular processes, including synaptic plasticity, neuroinflammation, and oxidative stress. Understanding the complex epigenetic mechanisms in AD provides new avenues for therapeutic interventions. This review comprehensively examines the role of DNA methylation and histone modifications in the context of AD. It aims to contribute to a deeper understanding of AD pathogenesis and facilitate the development of targeted therapeutic strategies.

79The role of histone acetylation in memory formation and cognitive impairments.PubMed

Lucia Peixoto, Ted Abel
Neuropsychopharmacology. 2013 Jan;38(1):62-76. doi: 10.1038/npp.2012.86. Epub 2012 Jun 6.
Long-term memory formation requires transcription and protein synthesis. Over the past few decades, a great amount of knowledge has been gained regarding the molecular players that regulate the transcriptional program linked to memory consolidation. Epigenetic mechanisms have been shown to be essential for the regulation of neuronal gene expression, and histone acetylation has been one of the most studied and best characterized. In this review, we summarize the lines of evidence that have shown the relevance of histone acetylation in memory in both physiological and pathological conditions. Great advances have been made in identifying the writers and erasers of histone acetylation marks during learning. However, the identities of the upstream regulators and downstream targets that mediate the effect of changes in histone acetylation during memory consolidation remain restricted to a handful of molecules. We outline a general model by which corepressors and coactivators regulate histone acetylation during memory storage and discuss how the recent advances in high-throughput sequencing have the potential to radically change our understanding of how epigenetic control operates in the brain.

80Differential Mobility and Self-Association of Arc/Arg3.1 in the Cytoplasm and Nucleus of Living Cells.PubMed

Per Niklas Hedde, Barbara Barylko, Derk D Binns, et al.
ACS Chem Neurosci. 2022 Apr 6;13(7):876-882. doi: 10.1021/acschemneuro.1c00744. Epub 2022 Mar 23.
Arc, also known as Arg3.1, is an activity-dependent immediate-early gene product that plays essential roles in memory consolidation. A pool of Arc is located in the postsynaptic cytoplasm, where it promotes AMPA receptor endocytosis and cytoskeletal remodeling. However, Arc is also found in the nucleus, with a major portion being associated with promyelocytic leukemia nuclear bodies (PML-NBs). Nuclear Arc has been implicated in epigenetic control of gene transcription associated with learning and memory. In this study, we use a battery of fluorescence nanoimaging approaches to characterize the behavior of Arc ectopically expressed in heterologous cells. Our results indicate that in the cytoplasm, Arc exists predominantly as monomers and dimers associated with slowly diffusing particles. In contrast, nuclear Arc is almost exclusively monomeric and displays a higher diffusivity than cytoplasmic Arc. We further show that Arc moves freely and rapidly between PML-NBs and the nucleoplasm and that its movement within PML-NBs is relatively unobstructed.

81Exercise improves cognitive responses to psychological stress through enhancement of epigenetic mechanisms and gene expression in the dentate gyrus.PubMed

Andrew Collins, Louise E Hill, Yalini Chandramohan, et al.
PLoS One. 2009;4(1):e4330. doi: 10.1371/journal.pone.0004330. Epub 2009 Jan 30.
BACKGROUND: We have shown previously that exercise benefits stress resistance and stress coping capabilities. Furthermore, we reported recently that epigenetic changes related to gene transcription are involved in memory formation of stressful events. In view of the enhanced coping capabilities in exercised subjects we investigated epigenetic, gene expression and behavioral changes in 4-weeks voluntarily exercised rats. METHODOLOGY/PRINCIPAL FINDINGS: Exercised and control rats coped differently when exposed to a novel environment. Whereas the control rats explored the new cage for the complete 30-min period, exercised animals only did so during the first 15 min after which they returned to sleeping or resting behavior. Both groups of animals showed similar behavioral responses in the initial forced swim session. When re-tested 24 h later however the exercised rats showed significantly more immobility behavior and less struggling and swimming. If rats were killed at 2 h after novelty or the initial swim test, i.e. at the peak of histone H3 phospho-acetylation and c-Fos induction, then the exercised rats showed a significantly higher number of dentate granule neurons expressing the histone modifications and immediate-early gene induction. CONCLUSIONS/SIGNIFICANCE: Thus, irrespective of the behavioral response in the novel cage or initial forced swim session, the impact of the event at the dentate gyrus level was greater in exercised rats than in control animals. Furthermore, in view of our concept that the neuronal response in the dentate gyrus after forced swimming is involved in memory formation of the stressful event, the observations in exercised rats of enhanced neuronal responses as well as higher immobility responses in the re-test are consistent with the reportedly improved cognitive performance in these animals. Thus, improved stress coping in exercised subjects seems to involve enhanced cognitive capabilities possibly resulting from distinct epigenetic mechanisms in dentate gyrus neurons.

82Acetyl-CoA synthetase regulates histone acetylation and hippocampal memory.PubMed

Philipp Mews, Greg Donahue, Adam M Drake, et al.
Nature. 2017 Jun 15;546(7658):381-386. doi: 10.1038/nature22405. Epub 2017 May 31.
Metabolic production of acetyl coenzyme A (acetyl-CoA) is linked to histone acetylation and gene regulation, but the precise mechanisms of this process are largely unknown. Here we show that the metabolic enzyme acetyl-CoA synthetase 2 (ACSS2) directly regulates histone acetylation in neurons and spatial memory in mammals. In a neuronal cell culture model, ACSS2 increases in the nuclei of differentiating neurons and localizes to upregulated neuronal genes near sites of elevated histone acetylation. A decrease in ACSS2 lowers nuclear acetyl-CoA levels, histone acetylation, and responsive expression of the cohort of neuronal genes. In adult mice, attenuation of hippocampal ACSS2 expression impairs long-term spatial memory, a cognitive process that relies on histone acetylation. A decrease in ACSS2 in the hippocampus also leads to defective upregulation of memory-related neuronal genes that are pre-bound by ACSS2. These results reveal a connection between cellular metabolism, gene regulation, and neural plasticity and establish a link between acetyl-CoA generation 'on-site' at chromatin for histone acetylation and the transcription of key neuronal genes.

83Targeting acetyl-CoA metabolism attenuates the formation of fear memories through reduced activity-dependent histone acetylation.PubMed

Desi C Alexander, Tanya Corman, Mariel Mendoza, et al.
Proc Natl Acad Sci U S A. 2022 Aug 9;119(32):e2114758119. doi: 10.1073/pnas.2114758119. Epub 2022 Aug 3.
Histone acetylation is a key component in the consolidation of long-term fear memories. Histone acetylation is fueled by acetyl-coenzyme A (acetyl-CoA), and recently, nuclear-localized metabolic enzymes that produce this metabolite have emerged as direct and local regulators of chromatin. In particular, acetyl-CoA synthetase 2 (ACSS2) mediates histone acetylation in the mouse hippocampus. However, whether ACSS2 regulates long-term fear memory remains to be determined. Here, we show that Acss2 knockout is well tolerated in mice, yet the Acss2-null mouse exhibits reduced acquisition of long-term fear memory. Loss of Acss2 leads to reductions in both histone acetylation and expression of critical learning and memory-related genes in the dorsal hippocampus, specifically following fear conditioning. Furthermore, systemic administration of blood-brain barrier-permeable Acss2 inhibitors during the consolidation window reduces fear-memory formation in mice and rats and reduces anxiety in a predator-scent stress paradigm. Our findings suggest that nuclear acetyl-CoA metabolism via ACSS2 plays a critical, previously unappreciated, role in the formation of fear memories.

84Astrocytic ApoE reprograms neuronal cholesterol metabolism and histone-acetylation-mediated memory.PubMed

Xiaohui Li, Juan Zhang, Dingfeng Li, et al.
Neuron. 2021 Mar 17;109(6):957-970.e8. doi: 10.1016/j.neuron.2021.01.005. Epub 2021 Jan 26.
Astrocytes metabolically interact with neighboring neurons by providing multiple substances to neurons. How astrocytes regulate neural functions via altering the neuronal metabolic state remains elusive. Here, we demonstrate that astrocytic ApoE vectors a variety of microRNAs (miRNAs), and these miRNAs specifically silence genes involved in neuronal cholesterol biosynthesis, ultimately accounting for accumulation of the pathway-initiating substrate acetyl-CoA. Consequently, histone acetylation is promoted, and transcription is activated in neurons. Functionally, we demonstrate that ApoE-mediated neuronal histone acetylation leads to increased H3K27ac enrichment in the promoters of multiple neuronal immediate early genes and subsequently to enhanced memory consolidation in mice. Importantly, human ApoE4 vectors lower levels of miRNAs than ApoE3 and therefore is less capable of metabolic and epigenetic regulation in neurons. Collectively, our findings define an astrocytic ApoE-mediated neuronal epigenetic mechanism as a novel means through which astrocytes modulate brain connectivity and function.

85Regulation of HDAC1 and HDAC2 during consolidation and extinction of fear memory.PubMed

Sarfraj Ahmad Siddiqui, Sanjay Singh, Rajesh Ugale, et al.
Brain Res Bull. 2019 Aug;150:86-101. doi: 10.1016/j.brainresbull.2019.05.011. Epub 2019 May 17.
Histone deacetylases (HDACs) regulate gene expression epigenetically through synchronized removal of acetyl groups from histones required towards memory consolidation. Moreover, dysregulated epigenetic machinery during fear or extinction learning may result in altered expression of some of these genes and result in Post Traumatic Stress Disorder (PTSD). In the present study, region-specific expression of Histone deacetylase 1 (HDAC1) and Histone deacetylase 2 (HDAC2) was correlated to the acetylation of histones H3 and H4 and the resultant conditioned response, in rats undergone fear and extinction learning. The neuronal activation, histone acetylation at H3/H4 and expression of HDAC1/HDAC2 in centrolateral amygdala (CeL) and centromedial amygdala (CeM) of central Amygdala (CeA) and prelimbic (PL) and infralimbic (IL) of Prefrontal cortex (PFC) were found to be associated in a differential manner following fear and extinction learning. Moreover in CeM, the main output of the fear circuitry, the level of HDAC1 was down-regulated following conditioning and up-regulated following extinction as opposed to which HDAC2 was down-regulated in CeM following conditioning but not following extinction. Furthermore, in CeL the HDAC1 was upregulated and HDAC2 was downregulated following conditioning and extinction. This has important implications in speculating of the role of HDACs in fear memory consolidation and its extinction.

8617β-Estradiol regulates histone alterations associated with memory consolidation and increases Bdnf promoter acetylation in middle-aged female mice.PubMed

Ashley M Fortress, Jaekyoon Kim, Rachel L Poole, et al.
Learn Mem. 2014 Aug 15;21(9):457-67. doi: 10.1101/lm.034033.113. Print 2014 Sep.
Histone acetylation is essential for hippocampal memory formation in young adult rodents. Although dysfunctional histone acetylation has been associated with age-related memory decline in male rodents, little is known about whether histone acetylation is altered by aging in female rodents. In young female mice, the ability of 17β-estradiol (E2) to enhance object recognition memory consolidation requires histone H3 acetylation in the dorsal hippocampus. However, the extent to which histone acetylation is regulated by E2 in middle-aged females is unknown. The mnemonic benefits of E2 in aging females appear to be greatest in middle age, and so pinpointing the molecular mechanisms through which E2 enhances memory at this age could lead to the development of safer and more effective treatments for maintaining memory function without the side effects of current therapies. Here, we show that dorsal hippocampal infusion of E2 rapidly enhanced object recognition and spatial memory, and increased histone H3 acetylation in the dorsal hippocampus, while also significantly reducing levels of histone deacetylase (HDAC2 and HDAC3) proteins. E2 specifically increased histone H3 acetylation at Bdnf promoters pII and pIV in the dorsal hippocampus of both young and middle-aged mice, despite age-related decreases in pI and pIV acetylation. Furthermore, levels of mature BDNF and pro-BDNF proteins in the dorsal hippocampus were increased by E2 in middle-aged females. Together, these data suggest that the middle-aged female dorsal hippocampus remains epigenetically responsive to E2, and that E2 may enhance memory in middle-aged females via epigenetic regulation of Bdnf.

87Chromatin plasticity predetermines neuronal eligibility for memory trace formation.PubMed

Giulia Santoni, Simone Astori, Marion Leleu, et al.
Science. 2024 Jul 26;385(6707):eadg9982. doi: 10.1126/science.adg9982.
Memories are encoded by sparse populations of neurons but how such sparsity arises remains largely unknown. We found that a neuron's eligibility to be recruited into the memory trace depends on its epigenetic state prior to encoding. Principal neurons in the mouse lateral amygdala display intrinsic chromatin plasticity, which when experimentally elevated favors neuronal allocation into the encoding ensemble. Such chromatin plasticity occurred at genomic regions underlying synaptic plasticity and was accompanied by increased neuronal excitability in single neurons in real time. Lastly, optogenetic silencing of the epigenetically altered neurons prevented memory expression, revealing a cell-autonomous relationship between chromatin plasticity and memory trace formation. These results identify the epigenetic state of a neuron as a key factor enabling information encoding.

88Multisensory integration, sensory substitution and visual rehabilitation.PubMed

Michael J Proulx, Maurice Ptito, Amir Amedi
Neurosci Biobehav Rev. 2014 Apr;41:1-2. doi: 10.1016/j.neubiorev.2014.03.004.
Sensory substitution has advanced remarkably over the past 35 years since first introduced to the scientific literature by Paul Bach-y-Rita. In this issue dedicated to his memory, we describe a collection of reviews that assess the current state of neuroscience research on sensory substitution, visual rehabilitation, and multisensory processes.

89Multisensory Integration and AgingPubMed

Jennifer L. Mozolic, Christina E. Hugenschmidt, Ann M. Peiffer, et al.
Effective processing of multisensory stimuli relies on both the peripheral sensory organs and central processing in subcortical and cortical structures. As we age, there are significant changes in all sensory systems and a variety of cognitive functions. Visual acuity tends to decrease and hearing thresholds generally increase (Kalina 1997; Liu and Yan 2007), whereas performance levels on tasks of motor speed, executive function, and memory typically decline (Rapp and Heindel 1994; Birren and Fisher 1995; Rhodes 2004). There are also widespread changes in the aging brain, including reductions in gray and white matter volume (Good et al. 2001; Salat et al. 2009), alterations in neurotransmitter systems (Muir 1997; Backman et al. 2006), regional hypoperfusion (Martin et al. 1991; Bertsch et al. 2009), and altered patterns of functional activity during cognitive tasks (Cabeza et al. 2004; Grady 2008). Given the extent of age-related alterations in sensation, perception, and cognition, as well as in the anatomy and physiology of the brain, it is not surprising that multisensory integration also changes with age. Several early studies provided mixed results on the differences between multisensory processing in older and younger adults (Stine et al. 1990; Helfer 1998; Strupp et al. 1999; Cienkowski and Carney 2002; Sommers et al. 2005). For example, Stine and colleagues (1990) reported that although younger adults’ memory for news events was better after audiovisual presentation than after auditory information alone, older adults did not show improvement during the multisensory conditions. In contrast, Cienkowski and Carney (2002) demonstrated that audiovisual integration on the McGurk illusion was similar for older and younger adults, and that in some conditions, older adults were even more likely to report the fusion of visual and auditory information than their young counterparts. Similarly, in a study examining the contribution of somatosensory input to participants’ perception of visuospatial orientation, Strupp et al. (1999) reported an age-related increase in the integration of somatosensory information into the multisensory representation of body orientation. Despite providing a good indication that multisensory processing is somehow altered in aging, the results of these studies are somewhat difficult to interpret due to their use of complex cognitive tasks and illusions, and to the variability in analysis methods. Several newer studies that have attempted to address these factors more clearly demonstrate that multisensory integration is enhanced in older adults (Laurienti et al. 2006; Peiffer et al. 2007; Diederich et al. 2008). On a two-choice audiovisual discrimination task, Laurienti and colleagues (2006) showed that response time (RT) benefits for multisensory versus unisensory targets were larger for older adults than for younger adults (Figure 20.1). That is, older adults’ responses during audiovisual conditions were speeded more than younger adults’, when compared with their respective responses during unisensory conditions. Multisensory gains in older adults remained significantly larger than those observed in younger adults, even after controlling for the presence of two targets in the multisensory condition (redundant target effect; Miller 1982, 1986; Laurienti et al. 2006). Using similar analysis methods, Peiffer et al. (2007) also reported increased multisensory gains in older adults. On a simple RT task, where average unisensory RTs were equivalent in younger and older adults, older adults actually responded than younger adults on multisensory trials because of their enhanced multisensory integration (Peiffer et al. 2007). Diederich and colleagues (2008) have also shown that older adults exhibit greater speeding of responses to multisensory targets than younger adults on a saccadic RT task. The analysis methods used in this experiment indicate a slowing of peripheral sensory processing, as well as a wider time window over which integration of auditory and visual stimuli can occur (Diederich et al. 2008). These experiments highlight several possible explanations that could help answer a critical question about multisensory processing in aging: Why do older adults exhibit greater integration of multisensory stimuli than younger adults? Potential sources of enhanced integration in older adults include age-related cognitive slowing not specific to multisensory processing, inverse effectiveness associated with sensory deficits, alterations in the temporal parameters of integration, and inefficient top–down modulation of sensory processing. In the following sections we will investigate each of these possible explanations in greater detail and offer some alternative hypotheses for the basis of enhanced multisensory integration in older adults.

90Shared cognitive resources between memory and attention during sound-sequence encoding.PubMed

Salomé Blain, Francesca Talamini, Lesly Fornoni, et al.
Atten Percept Psychophys. 2022 Apr;84(3):739-759. doi: 10.3758/s13414-021-02390-2. Epub 2022 Feb 1.
You are on the phone, walking down a street. This daily situation calls for selective attention, allowing you to ignore surrounding irrelevant sounds, while trying to encode in memory the relevant information from the phone. Attention and memory are indeed two cognitive functions that are interacting constantly. However, their interaction is not yet well characterized during sound-sequence encoding. We independently manipulated both selective attention and working memory in a delayed-matching-to-sample of two tone-series, played successively in one ear. During the first melody presentation (memory encoding), weakly or highly distracting melodies were played in the other ear. Detection of the difference between the two comparison melodies could be easy or difficult, requiring low- or high-precision encoding, i.e., low or high memory load. Sixteen non-musician and 16 musician participants performed this new task. As expected, both groups of participants were less accurate in the difficult memory task and in difficult-to-ignore distractor conditions. Importantly, an interaction between memory-task difficulty and distractor difficulty was found in both groups. Non-musicians presented less difference between easy and difficult-to-ignore distractors in the difficult than in the easy memory task. On the contrary, musicians, with better performance than non-musicians, showed a greater difference between easy and difficult-to-ignore distractors in the difficult than in the easy memory task. In a second experiment including trials without a distractor, we could show that these effects are in line with the cognitive load theory. Taken together, these results speak for shared cognitive resources between working memory and attention during sound-sequence encoding.

91Divided attention at encoding or retrieval interferes with emotionally enhanced memory for words.PubMed

Ryan C Yeung, Myra A Fernandes
Memory. 2021 Mar;29(3):284-297. doi: 10.1080/09658211.2021.1887896. Epub 2021 Feb 23.
Emotional information is typically better remembered than neutral information. We asked whether emotional, compared to neutral, words were less vulnerable to the detrimental effects of divided attention. In two experiments, undergraduate students intentionally encoded words of intermixed valence (neutral, negative, or positive) and arousal (neutral, high, or low). Following a filled delay, memory was assessed with a free recall test. In Experiment 1, participants encoded visually-presented words under either full attention (FA; no distracting task) or divided attention (DA; concurrently making animacy decisions to auditorily-presented distractor words) in a counterbalanced, within-subjects design. As expected following FA at encoding, recall was significantly enhanced for negative compared to neutral words. Following DA at encoding, recall was significantly impaired across all valences. Critically, DA at encoding also eliminated the memory benefit for negative information: recall of negative words was no longer significantly different from neutral or positive words. In Experiment 2, we manipulated attention at retrieval rather than encoding. Remarkably, results from Experiment 1 were replicated: DA eliminated the well-known emotionality boost for negative words. In both experiments, memory for positive words did not significantly differ from neutral. Findings suggest that DA during either encoding or retrieval can interfere with the specific mechanisms by which negative emotion typically improves memory.

92The effects of divided attention at encoding and at retrieval on multidimensional source memory.PubMed

Nathaniel R Greene, Benjamin A Martin, Moshe Naveh-Benjamin
J Exp Psychol Learn Mem Cogn. 2021 Nov;47(11):1870-1887. doi: 10.1037/xlm0001051. Epub 2021 Aug 16.
Dividing attention (DA) between a memory task and a secondary task results in deficits in memory performance across a wide array of memory tasks, but these effects are larger when DA occurs at encoding than at retrieval. Although some research suggests the effects of DA are equal for item and associative memory, thereby suggesting that DA disrupts all components of an episode to the same extent, there have been relatively few studies directly examining the effects of DA on multiple features of the same episode. In addition, no studies have examined how DA may affect the stochastic dependency between multiple source dimensions of a given episode, which is central to theories of source memory, and episodic memory in general. Thus, in two experiments, we used a multidimensional source memory task-examining memory for items and multiple source features-and separately investigated how DA at encoding or at retrieval affects item memory, source memory, and joint source retrieval. DA was manipulated at encoding in Experiment 1 and at retrieval in Experiment 2. Whereas DA at encoding disrupted item memory, as well as source memory and source-source binding, though to a lesser extent, DA at retrieval did not affect any of these outcomes. Results are discussed in terms of levels of binding and the role of attention in encoding and retrieval of bounded episodic representations. (PsycInfo Database Record (c) 2022 APA, all rights reserved).

93Sustained Attention and Spatial Attention Distinctly Influence Long-term Memory Encoding.PubMed

Megan T deBettencourt, Stephanie D Williams, Edward K Vogel, et al.
J Cogn Neurosci. 2021 Sep 1;33(10):2132-2148. doi: 10.1162/jocn_a_01748.
Our attention is critically important for what we remember. Prior measures of the relationship between attention and memory, however, have largely treated "attention" as a monolith. Here, across three experiments, we provide evidence for two dissociable aspects of attention that influence encoding into long-term memory. Using spatial cues together with a sensitive continuous report procedure, we find that long-term memory response error is affected by both trial-by-trial fluctuations of sustained attention and prioritization via covert spatial attention. Furthermore, using multivariate analyses of EEG, we track both sustained attention and spatial attention before stimulus onset. Intriguingly, even during moments of low sustained attention, there is no decline in the representation of the spatially attended location, showing that these two aspects of attention have robust but independent effects on long-term memory encoding. Finally, sustained and spatial attention predicted distinct variance in long-term memory performance across individuals. That is, the relationship between attention and long-term memory suggests a composite model, wherein distinct attentional subcomponents influence encoding into long-term memory. These results point toward a taxonomy of the distinct attentional processes that constrain our memories.

94Engram neurons: Encoding, consolidation, retrieval, and forgetting of memory.PubMed

Axel Guskjolen, Mark S Cembrowski
Mol Psychiatry. 2023 Aug;28(8):3207-3219. doi: 10.1038/s41380-023-02137-5. Epub 2023 Jun 28.
Tremendous strides have been made in our understanding of the neurobiological substrates of memory - the so-called memory "engram". Here, we integrate recent progress in the engram field to illustrate how engram neurons transform across the "lifespan" of a memory - from initial memory encoding, to consolidation and retrieval, and ultimately to forgetting. To do so, we first describe how cell-intrinsic properties shape the initial emergence of the engram at memory encoding. Second, we highlight how these encoding neurons preferentially participate in synaptic- and systems-level consolidation of memory. Third, we describe how these changes during encoding and consolidation guide neural reactivation during retrieval, and facilitate memory recall. Fourth, we describe neurobiological mechanisms of forgetting, and how these mechanisms can counteract engram properties established during memory encoding, consolidation, and retrieval. Motivated by recent experimental results across these four sections, we conclude by proposing some conceptual extensions to the traditional view of the engram, including broadening the view of cell-type participation within engrams and across memory stages. In collection, our review synthesizes general principles of the engram across memory stages, and describes future avenues to further understand the dynamic engram.

95Divergent recruitment of developmentally defined neuronal ensembles supports memory dynamics.PubMed

Vilde A Kveim, Laurenz Salm, Talia Ulmer, et al.
Science. 2024 Aug 16;385(6710):eadk0997. doi: 10.1126/science.adk0997.
Memories are dynamic constructs whose properties change with time and experience. The biological mechanisms underpinning these dynamics remain elusive, particularly concerning how shifts in the composition of memory-encoding neuronal ensembles influence the evolution of a memory over time. By targeting developmentally distinct subpopulations of principal neurons, we discovered that memory encoding resulted in the concurrent establishment of multiple memory traces in the mouse hippocampus. Two of these traces were instantiated in subpopulations of early- and late-born neurons and followed distinct reactivation trajectories after encoding. The divergent recruitment of these subpopulations underpinned gradual reorganization of memory ensembles and modulated memory persistence and plasticity across multiple learning episodes. Thus, our findings reveal profound and intricate relationships between ensemble dynamics and the progression of memories over time.

96Beyond hippocampus: Thalamic and prefrontal contributions to an evolving memory.PubMed

Nakul Yadav, Andrew Toader, Priya Rajasethupathy
Neuron. 2024 Apr 3;112(7):1045-1059. doi: 10.1016/j.neuron.2023.12.021. Epub 2024 Jan 24.
The hippocampus has long been at the center of memory research, and rightfully so. However, with emerging technological capabilities, we can increasingly appreciate memory as a more dynamic and brain-wide process. In this perspective, our goal is to begin developing models to understand the gradual evolution, reorganization, and stabilization of memories across the brain after their initial formation in the hippocampus. By synthesizing studies across the rodent and human literature, we suggest that as memory representations initially form in hippocampus, parallel traces emerge in frontal cortex that cue memory recall, and as they mature, with sustained support initially from limbic then diencephalic then cortical circuits, they become progressively independent of hippocampus and dependent on a mature cortical representation. A key feature of this model is that, as time progresses, memory representations are passed on to distinct circuits with progressively longer time constants, providing the opportunity to filter, forget, update, or reorganize memories in the process of committing to long-term storage.

97About sleep's role in memory.PubMed

Björn Rasch, Jan Born
Physiol Rev. 2013 Apr;93(2):681-766. doi: 10.1152/physrev.00032.2012.
Over more than a century of research has established the fact that sleep benefits the retention of memory. In this review we aim to comprehensively cover the field of "sleep and memory" research by providing a historical perspective on concepts and a discussion of more recent key findings. Whereas initial theories posed a passive role for sleep enhancing memories by protecting them from interfering stimuli, current theories highlight an active role for sleep in which memories undergo a process of system consolidation during sleep. Whereas older research concentrated on the role of rapid-eye-movement (REM) sleep, recent work has revealed the importance of slow-wave sleep (SWS) for memory consolidation and also enlightened some of the underlying electrophysiological, neurochemical, and genetic mechanisms, as well as developmental aspects in these processes. Specifically, newer findings characterize sleep as a brain state optimizing memory consolidation, in opposition to the waking brain being optimized for encoding of memories. Consolidation originates from reactivation of recently encoded neuronal memory representations, which occur during SWS and transform respective representations for integration into long-term memory. Ensuing REM sleep may stabilize transformed memories. While elaborated with respect to hippocampus-dependent memories, the concept of an active redistribution of memory representations from networks serving as temporary store into long-term stores might hold also for non-hippocampus-dependent memory, and even for nonneuronal, i.e., immunological memories, giving rise to the idea that the offline consolidation of memory during sleep represents a principle of long-term memory formation established in quite different physiological systems.

98Mechanisms of systems memory consolidation during sleep.PubMed

Jens G Klinzing, Niels Niethard, Jan Born
Nat Neurosci. 2019 Oct;22(10):1598-1610. doi: 10.1038/s41593-019-0467-3. Epub 2019 Aug 26.
Long-term memory formation is a major function of sleep. Based on evidence from neurophysiological and behavioral studies mainly in humans and rodents, we consider the formation of long-term memory during sleep as an active systems consolidation process that is embedded in a process of global synaptic downscaling. Repeated neuronal replay of representations originating from the hippocampus during slow-wave sleep leads to a gradual transformation and integration of representations in neocortical networks. We highlight three features of this process: (i) hippocampal replay that, by capturing episodic memory aspects, drives consolidation of both hippocampus-dependent and non-hippocampus-dependent memory; (ii) brain oscillations hallmarking slow-wave and rapid-eye movement sleep that provide mechanisms for regulating both information flow across distant brain networks and local synaptic plasticity; and (iii) qualitative transformations of memories during systems consolidation resulting in abstracted, gist-like representations.

99Rapid Cortical Plasticity Supports Long-Term Memory Formation.PubMed

Melissa Hebscher, Erik Wing, Jennifer Ryan, et al.
Trends Cogn Sci. 2019 Dec;23(12):989-1002. doi: 10.1016/j.tics.2019.09.009. Epub 2019 Nov 6.
The standard systems consolidation account posits that recently formed memories are initially dependent on the hippocampus and only gradually become instantiated in neocortical networks over a period of weeks to years. However, recent animal and human research has identified rapid formation of cortical engrams at the time of learning that can support hippocampal-independent memories within hours or days. Conditions that promote rapid cortical learning include relatedness to prior knowledge, activation of knowledge in the service of action selection or active discovery, and repeated retrieval. Here, we propose that cortical hubs can support rapid learning through synchronous activation of sensorimotor representational cortices. Candidate neurobiological mechanisms include unmasking of latent synaptic connections and rapid synaptic remodeling driven by disinhibitory processes.

100Elucidating the role of protein synthesis in hippocampus-dependent memory consolidation across the day and night.PubMed

Frank Raven, Youri G Bolsius, Lara V van Renssen, et al.
Eur J Neurosci. 2021 Oct;54(8):6972-6981. doi: 10.1111/ejn.14684. Epub 2020 Feb 3.
It is widely acknowledged that de novo protein synthesis is crucial for the formation and consolidation of long-term memories. While the basal activity of many signaling cascades that modulate protein synthesis fluctuates in a circadian fashion, it is unclear whether the temporal dynamics of protein synthesis-dependent memory consolidation vary depending on the time of day. More specifically, it is unclear whether protein synthesis inhibition affects hippocampus-dependent memory consolidation in rodents differentially across the day (i.e., the inactive phase with an abundance of sleep) and night (i.e., the active phase with little sleep). To address this question, male and female C57Bl6/J mice were trained in a contextual fear conditioning task at the beginning or the end of the light phase. Animals received a single systemic injection with the protein synthesis inhibitor anisomycin or vehicle directly, 4, 8 hr, or 11.5 hr following training, and memory was assessed after 24 hr. Here, we show that protein synthesis inhibition impaired the consolidation of context-fear memories selectively when the protein synthesis inhibitor was administered at the first three time points, irrespective of timing of training. Even though the basal activity of signaling pathways regulating de novo protein synthesis may fluctuate across the 24-hr cycle, these results suggest that the temporal dynamics of protein synthesis-dependent memory consolidation are similar for day-time and night-time learning.

101eIF2-dependent translation initiation: Memory consolidation and disruption in Alzheimer's disease.PubMed

Mauricio M Oliveira, Eric Klann
Semin Cell Dev Biol. 2022 May;125:101-109. doi: 10.1016/j.semcdb.2021.07.009. Epub 2021 Jul 23.
Memory storage is a conserved survivability feature, present in virtually any complex species. During the last few decades, much effort has been devoted to understanding how memories are formed and which molecular switches define whether a memory should be stored for a short or a long period of time. Among these, de novo protein synthesis is known to be required for the conversion of short- to long-term memory. There are a number translational control pathways involved in synaptic plasticity and memory consolidation, including the phosphorylation of the eukaryotic initiation factor 2 alpha (eIF2α), which has emerged as a critical molecular switch for long-term memory consolidation. In this review, we discuss findings pertaining to the requirement of de novo protein synthesis to memory formation, how local dendritic and axonal translation is regulated in neurons, and how these can influence memory consolidation. We also highlight the importance of eIF2α-dependent translation initiation to synaptic plasticity and memory formation. Finally, we contextualize how aberrant phosphorylation of eIF2α contributes to Alzheimer's disease (AD) pathology and how preventing disruption of eIF2-dependent translation may be a therapeutic avenue for preventing and/or restoring memory loss in AD.

102Spatiotemporally resolved protein synthesis as a molecular framework for memory consolidation.PubMed

Prerana Shrestha, Eric Klann
Trends Neurosci. 2022 Apr;45(4):297-311. doi: 10.1016/j.tins.2022.01.004. Epub 2022 Feb 17.
De novo protein synthesis is required for long-term memory consolidation. Dynamic regulation of protein synthesis occurs via a complex interplay of translation factors and modulators. Many components of the protein synthesis machinery have been targeted either pharmacologically or genetically to establish its requirement for memory. The combination of ligand/light-gating and genetic strategies, that is, chemogenetics and optogenetics, has begun to reveal the spatiotemporal resolution of protein synthesis in specific cell types during memory consolidation. This review summarizes current knowledge of the macroscopic and microscopic neural substrates for protein synthesis in memory consolidation. In addition, we highlight future directions for determining the localization and timing of de novo protein synthesis for memory consolidation with tools that permit unprecedented spatiotemporal precision.

103Memory. Engram cells retain memory under retrograde amnesia.PubMed

Tomás J Ryan, Dheeraj S Roy, Michele Pignatelli, et al.
Science. 2015 May 29;348(6238):1007-13. doi: 10.1126/science.aaa5542. Epub 2015 May 28.
Memory consolidation is the process by which a newly formed and unstable memory transforms into a stable long-term memory. It is unknown whether the process of memory consolidation occurs exclusively through the stabilization of memory engrams. By using learning-dependent cell labeling, we identified an increase of synaptic strength and dendritic spine density specifically in consolidated memory engram cells. Although these properties are lacking in engram cells under protein synthesis inhibitor-induced amnesia, direct optogenetic activation of these cells results in memory retrieval, and this correlates with retained engram cell-specific connectivity. We propose that a specific pattern of connectivity of engram cells may be crucial for memory information storage and that strengthened synapses in these cells critically contribute to the memory retrieval process.

104The cortical amygdala consolidates a socially transmitted long-term memory.PubMed

Zhihui Liu, Wenfei Sun, Yi Han Ng, et al.
Nature. 2024 Aug;632(8024):366-374. doi: 10.1038/s41586-024-07632-5. Epub 2024 Jul 3.
Social communication guides decision-making, which is essential for survival. Social transmission of food preference (STFP) is an ecologically relevant memory paradigm in which an animal learns a desirable food odour from another animal in a social context, creating a long-term memory. How food-preference memory is acquired, consolidated and stored is unclear. Here we show that the posteromedial nucleus of the cortical amygdala (COApm) serves as a computational centre in long-term STFP memory consolidation by integrating social and sensory olfactory inputs. Blocking synaptic signalling by the COApm-based circuit selectively abolished STFP memory consolidation without impairing memory acquisition, storage or recall. COApm-mediated STFP memory consolidation depends on synaptic inputs from the accessory olfactory bulb and on synaptic outputs to the anterior olfactory nucleus. STFP memory consolidation requires protein synthesis, suggesting a gene-expression mechanism. Deep single-cell and spatially resolved transcriptomics revealed robust but distinct gene-expression signatures induced by STFP memory formation in the COApm that are consistent with synapse restructuring. Our data thus define a neural circuit for the consolidation of a socially communicated long-term memory, thereby mechanistically distinguishing protein-synthesis-dependent memory consolidation from memory acquisition, storage or retrieval.

105Sleep and emotional processing.PubMed

Daniela Tempesta, Valentina Socci, Luigi De Gennaro, et al.
Sleep Med Rev. 2018 Aug;40:183-195. doi: 10.1016/j.smrv.2017.12.005. Epub 2017 Dec 22.
A growing body of literature suggests that sleep plays a critical role in emotional processing. This review aims at synthesizing current evidence on the role of sleep and sleep loss in the modulation of emotional reactivity, emotional memory formation, empathic behavior, fear conditioning, threat generalization and extinction memory. Behavioral and neurophysiological evidence suggesting that rapid-eye movement (REM) sleep plays an important role in emotional processing is also discussed. Furthermore, we examine the relations between sleep and emotions by reviewing the functional neuroimaging studies that elucidated the brain mechanisms underlying these relations. It is shown that sleep supports the formation of emotional episodic memories throughout all the stages that compose memory processing. On the contrary, sleep loss deteriorates both the encoding of emotional information and the emotional memory consolidation processes. Research is also progressively providing new insights into the protective role of sleep in human emotional homeostasis and regulation, promoting adaptive next-day emotional reactivity. In this respect, evidence converges in indicating that lack of sleep significantly influences emotional reactivity. Moreover, notwithstanding some contradictory findings, the processing of emotionally salient information could mainly benefit from REM sleep. However, some crucial aspects of sleep-dependent emotional modulation remain unclear.

106Promoting memory consolidation during sleep: A meta-analysis of targeted memory reactivation.PubMed

Xiaoqing Hu, Larry Y Cheng, Man Hey Chiu, et al.
Psychol Bull. 2020 Mar;146(3):218-244. doi: 10.1037/bul0000223.
Targeted memory reactivation (TMR) is a methodology employed to manipulate memory processing during sleep. TMR studies have great potential to advance understanding of sleep-based memory consolidation and corresponding neural mechanisms. Research making use of TMR has developed rapidly, with over 70 articles published in the last decade, yet no quantitative analysis exists to evaluate the overall effects. Here we present the first meta-analysis of sleep TMR, compiled from 91 experiments with 212 effect sizes (N = 2,004). Based on multilevel modeling, overall sleep TMR was highly effective (Hedges' g = 0.29, 95% CI [0.21, 0.38]), with a significant effect for two stages of non-rapid-eye-movement (NREM) sleep (Stage NREM 2: Hedges' g = 0.32, 95% CI [0.04, 0.60]; and slow-wave sleep: Hedges' g = 0.27, 95% CI [0.20, 0.35]). In contrast, TMR was not effective during REM sleep nor during wakefulness in the present analyses. Several analysis strategies were used to address the potential relevance of publication bias. Additional analyses showed that TMR improved memory across multiple domains, including declarative memory and skill acquisition. Given that TMR can reinforce many types of memory, it could be useful for various educational and clinical applications. Overall, the present meta-analysis provides substantial support for the notion that TMR can influence memory storage during NREM sleep, and that this method can be useful for understanding neurocognitive mechanisms of memory consolidation. (PsycINFO Database Record (c) 2020 APA, all rights reserved).

107Examining the engram encoding specificity hypothesis in mice.PubMed

Jung Hoon Jung, Ying Wang, Andrew J Mocle, et al.
Neuron. 2023 Jun 7;111(11):1830-1845.e5. doi: 10.1016/j.neuron.2023.03.007. Epub 2023 Mar 28.
According to the encoding specificity hypothesis, memory is best recalled by retrieval cues that overlap with training cues. Human studies generally support this hypothesis. However, memories are thought to be stored in neuronal ensembles (engrams), and retrieval cues are thought to reactivate neurons in an engram to induce memory recall. Here, we visualized engrams in mice to test whether retrieval cues that overlap with training cues produce maximal memory recall via high engram reactivation (engram encoding specificity hypothesis). Using variations of cued threat conditioning (pairing conditioned stimulus [CS] with footshock), we manipulated encoding and retrieval conditions along multiple domains, including pharmacological state, external sensory cue, and internal optogenetic cue. Maximal engram reactivation and memory recall occurred when retrieval conditions closely matched training conditions. These findings provide a biological basis for the encoding specificity hypothesis and highlight the important interaction between stored information (engram) and cues available at memory retrieval (ecphory).

108Distinct neural mechanisms underlie the success, precision, and vividness of episodic memory.PubMed

Franziska R Richter, Rose A Cooper, Paul M Bays, et al.
Elife. 2016 Oct 25;5:e18260. doi: 10.7554/eLife.18260.
A network of brain regions have been linked with episodic memory retrieval, but limited progress has been made in identifying the contributions of distinct parts of the network. Here, we utilized continuous measures of retrieval to dissociate three components of episodic memory: retrieval success, precision, and vividness. In the fMRI scanner, participants encoded objects that varied continuously on three features: color, orientation, and location. Participants' memory was tested by having them recreate the appearance of the object features using a continuous dial, and continuous vividness judgments were recorded. Retrieval success, precision, and vividness were dissociable both behaviorally and neurally: successful versus unsuccessful retrieval was associated with hippocampal activity, retrieval precision scaled with activity in the angular gyrus, and vividness judgments tracked activity in the precuneus. The ability to dissociate these components of episodic memory reveals the benefit afforded by measuring memory on a continuous scale, allowing functional parcellation of the retrieval network.

109An Update on Memory Reconsolidation Updating.PubMed

Jonathan L C Lee, Karim Nader, Daniela Schiller
Trends Cogn Sci. 2017 Jul;21(7):531-545. doi: 10.1016/j.tics.2017.04.006. Epub 2017 May 8.
The reactivation of a stored memory in the brain can make the memory transiently labile. During the time it takes for the memory to restabilize (reconsolidate) the memory can either be reduced by an amnesic agent or enhanced by memory enhancers. The change in memory expression is related to changes in the brain correlates of long-term memory. Many have suggested that such retrieval-induced plasticity is ideally placed to enable memories to be updated with new information. This hypothesis has been tested experimentally, with a translational perspective, by attempts to update maladaptive memories to reduce their problematic impact. We review here progress on reconsolidation updating studies, highlighting their translational exploitation and addressing recent challenges to the reconsolidation field.

110Memory Reconsolidation.PubMed

Josue Haubrich, Karim Nader
Curr Top Behav Neurosci. 2018;37:151-176. doi: 10.1007/7854_2016_463.
Scientific advances in the last decades uncovered that memory is not a stable, fixed entity. Apparently stable memories may become transiently labile and susceptible to modifications when retrieved due to the process of reconsolidation. Here, we review the initial evidence and the logic on which reconsolidation theory is based, the wide range of conditions in which it has been reported and recent findings further revealing the fascinating nature of this process. Special focus is given to conceptual issues of when and why reconsolidation happen and its possible outcomes. Last, we discuss the potential clinical implications of memory modifications by reconsolidation.

111Memory reconsolidation and memory updating: Two sides of the same coin?PubMed

Federico Bermúdez-Rattoni, James L McGaugh
Neurobiol Learn Mem. 2017 Jul;142(Pt A):1-3. doi: 10.1016/j.nlm.2017.05.002. Epub 2017 May 3.

112Behavioral tagging underlies memory reconsolidation.PubMed

Iván Rabinovich Orlandi, Camila L Fullio, Matías Nicolás Schroeder, et al.
Proc Natl Acad Sci U S A. 2020 Jul 28;117(30):18029-18036. doi: 10.1073/pnas.2009517117. Epub 2020 Jul 14.
Memory reconsolidation occurs when a retrieving event destabilizes transiently a consolidated memory, triggering thereby a new process of restabilization that ensures memory persistence. Although this phenomenon has received wide attention, the effect of new information cooccurring with the reconsolidation process has been less explored. Here we demonstrate that a memory-retrieving event sets a neural tag, which enables the reconsolidation of memory after binding proteins provided by the original or a different contiguous experience. We characterized the specific temporal window during which this association is effective and identified the protein kinase A (PKA) and the extracellular signal-regulated kinase 1 and 2 (ERK 1/2) pathways as the mechanisms related to the setting of the reconsolidation tag and the synthesis of proteins. Our results show, therefore, that memory reconsolidation is mediated by a "behavioral tagging" process, which is common to different memory forms. They represent a significant advance in understanding the fate of memories reconsolidated while being adjacent to other events, and provide a tool for designing noninvasive strategies to attenuate (pathological/traumatic) or improve (education-related) memories.

113False Memory in Alzheimer's Disease.PubMed

Mohamad El Haj, Fabienne Colombel, Dimitrios Kapogiannis, et al.
Behav Neurol. 2020 Feb 19;2020:5284504. doi: 10.1155/2020/5284504. eCollection 2020.
Patients with Alzheimer's Disease (AD) not only are suffering from amnesia but also are prone to memory distortions, such as experiencing detailed and vivid recollections of episodic events that have never been encountered (i.e., false memories). To describe and explain these distortions, we offer a review to synthesize current knowledge on false memory in AD into a framework allowing for better understanding of the taxonomy and phenomenology of false memories and of the cognitive mechanisms that may underlie false memory formation in AD. According to this review, certain phenomenological characteristics of memories (e.g., high emotional load, high vividness, or high familiarity) result in misattributions in AD. More specifically, this review proposes that generalized decline in cognitive control and inhibition in AD may result in difficulties in suppressing irrelevant information during memory monitoring, especially when irrelevant (i.e., false) information is characterized by high emotion, vividness, or familiarity. This review also proposes that binding deficits in AD decrease the ability to retrieve relevant contextual details, leading to source monitoring errors and false memories. In short, this review depicts how phenomenological characteristics of memories and failures of monitoring during retrieval contribute to the occurrence of false memory in AD.

114Retrieval-induced forgetting of emotional memories.PubMed

Crystal Reeck, Kevin S LaBar
Cogn Emot. 2024 Feb;38(1):131-147. doi: 10.1080/02699931.2023.2279156. Epub 2024 Jan 5.
Long-term memory manages its contents to facilitate adaptive behaviour, amplifying representations of information relevant to current goals and expediting forgetting of information that competes with relevant memory traces. Both mnemonic selection and inhibition maintain congruence between the contents of long-term memory and an organism's priorities. However, the capacity of these processes to modulate affective mnemonic representations remains ambiguous. Three empirical experiments investigated the consequences of mnemonic selection and inhibition on affectively charged and neutral mnemonic representations using an adapted retrieval practice paradigm. Participants encoded neutral cue words and affectively negative or neutral associates and then selectively retrieved a subset of these associates multiple times. The consequences of selection and inhibitory processes engaged during selective retrieval were evaluated on a final memory test in which recall for all studied associates was probed. Analyses of memory recall indicated that both affectively neutral and negative mnemonic representations experienced similar levels of enhancement and impairment following selective retrieval, demonstrating the susceptibility of affectively salient memories to these mnemonic processes. These findings indicate that although affective memories may be more strongly encoded in memory, they remain amenable to inhibition and flexibly adaptable to the evolving needs of the organism.

115Retrieval of Emotional Events from Memory.PubMed

Elizabeth A Kensinger, Jaclyn H Ford
Annu Rev Psychol. 2020 Jan 4;71:251-272. doi: 10.1146/annurev-psych-010419-051123. Epub 2019 Jul 5.
The enhancing effects of emotion on memory have been well documented; emotional events are often more frequently and more vividly remembered than their neutral counterparts. Much of the prior research has emphasized the effects of emotion on encoding processes and the downstream effects of these changes at the time of retrieval. In the current review, we focus specifically on how emotional valence influences retrieval processes, examining how emotion influences the experience of remembering an event at the time of retrieval (retrieval as an end point) as well as how emotion alters the way in which remembering the event affects the underlying memory representation and subsequent retrievals (retrieval as a starting point). We suggest ways in which emotion may augment or interfere with the selective enhancement of particular memory details, using both online and offline processes, and discuss how these effects of emotion may contribute to memory distortions in affective disorders.

116Mutual Influence of Reward Anticipation and Emotion on Brain Activity during Memory Retrieval.PubMed

Chunping Yan, Fang Liu, Yunyun Li, et al.
Front Psychol. 2017 Oct 25;8:1873. doi: 10.3389/fpsyg.2017.01873. eCollection 2017.
Previous studies on the joint effect of reward motivation and emotion on memory retrieval have obtained inconsistent results. Furthermore, whether and how any such joint effect might vary over time remains unclear too. Accordingly, using the event-related potential (ERP) measurement of high temporal resolution, our study investigates the cognitive and brain mechanisms of monetary reward and emotion affecting the retrieval processes of episodic memory. Twenty undergraduate and graduate students participated in the research, and our study's behavioral results indicated that reward (relative to no reward) and negative emotion (relative to positive and neutral emotion) significantly improved recognition performance. The ERP results showed that there were significant interactions between monetary reward and emotion on memory retrieval, and the reward effects of positive, neutral, and negative memory occurred at varied intervals in mean amplitude. The reward effect of positive memory appeared relatively early, at 260-330 ms after the stimulus onset in the frontal-frontocentral area, at 260-500 ms in the centroparietal-parietal area and at 500-700 ms in the frontocentral area. However, the reward effects of neutral and negative memory occurred relatively later, and that of negative memory appeared at 500-700 ms in the frontocentral and centroparietal area and that of neutral memory was at 500-700 ms in the frontocentral and centroparietal-parietal area. Meanwhile, significant FN400 old/new effects were observed in the negative and rewarded positive items, and the old/new effects of negative items appeared earlier at FN400 than positive items. Also, significant late positive component (LPC) old/new effects were found in the positive, negative, and rewarded neutral items. These results suggest that, monetary reward and negative emotion significantly improved recognition performance, and there was a mutual influence between reward and emotion on brain activity during memory retrieval.

117Successful retrieval is its own reward.PubMed

Devyn E Smith, Nicole M Long
bioRxiv. 2024 Jul 26:2024.07.26.605274. doi: 10.1101/2024.07.26.605274.
The ability to successfully remember past events is critical to our daily lives, yet the neural mechanisms underlying the motivation to retrieve is unclear. Although reward-system activity and feedback-related signals have been observed during memory retrieval, whether this signal reflects intrinsic reward or goal-attainment is unknown. Adjudicating between these two alternatives is crucial for understanding how individuals are motivated to engage in retrieval and how retrieval supports later remembering. To test these two accounts, we conducted between-subjects recognition memory tasks on human participants undergoing scalp electroencephalography and varied test-phase goals (recognize old vs. detect new items). We used an independently validated feedback classifier to measure positive feedback evidence. We find positive feedback following successful retrieval regardless of task goals. Together, these results suggest that successful retrieval is intrinsically rewarding. Such a feedback signal may promote future retrieval attempts as well as bolster later memory for the successfully retrieved events.

118State-dependent memory retrieval: insights from neural dynamics and behavioral perspectives.PubMed

Fei Wang, Xu Chen, Binshi Bo, et al.
Learn Mem. 2023 Dec 19;30(12):325-337. doi: 10.1101/lm.053893.123. Print 2023 Dec.
Memory retrieval is strikingly susceptible to external states (environment) and internal states (mood states and alcohol), yet we know little about the underlying mechanisms. We examined how internally generated states influence successful memory retrieval using the functional magnetic resonance imaging (fMRI) of laboratory mice during memory retrieval. Mice exhibited a strong tendency to perform memory retrieval correctly only in the reinstated mammillary body-inhibited state, in which mice were trained to discriminate auditory stimuli in go/no-go tasks. fMRI revealed that distinct auditory cues engaged differential brain regions, which were primed by internal state. Specifically, a cue associated with a reward activated the lateral amygdala, while a cue signaling no reward predominantly activated the postsubiculum. Modifying these internal states significantly altered the neural activity balance between these regions. Optogenetic inhibition of those regions in the precue period blocked the retrieval of type-specific memories. Our findings suggest that memory retrieval is under the control of two interrelated neural circuits underlying the neural basis of state-dependent memory retrieval.

119Proust and involuntary retrieval.PubMed

Pascale Gisquet-Verrier, David C Riccio
Front Psychol. 2024 Feb 13;15:1235098. doi: 10.3389/fpsyg.2024.1235098. eCollection 2024.
Proust was undoubtedly a pioneer in exploring cognitive processes engaged in memory. The analysis of the episode of the madeleine, as well as the study of Proust's statements on the goals of his work, clearly reveal the visionary side of this author. Long before several concepts entered into mainstream scientific thought, Proust proposed, among other things, that recall was a reconstruction, that a sensory cue could provoke a memory recall, and that we should distinguish between voluntary and involuntary memory. Through numerous episodes of "" scattered throughout his work, Proust illustrates a particular form of autobiographic memory recall: a recall that does not involve consciousness and whose starting point is an emotion provoked by a specific cue. This recall, which leads, according to Proust, to a more intense revival of the memory than voluntary recall, has only reached prominence in cognitive science more than 80 years later. Additionaly, Proust underlined the determinant role that emotion may have in this particular form of recall. On the other hand, studies on animals have shown that the presentation of a retrieval cue could induce emotional reactions followed by a facilitation of the memory retrieval associated with the cue. The existence of these data, which support Proust's proposals, should encourage the neuroscience community to further explore, in humans and animals, this form of cue elicited emotion that initiated involuntary recall of autobiographical memory.

120GABA from reactive astrocytes impairs memory in mouse models of Alzheimer's disease.PubMed

Seonmi Jo, Oleg Yarishkin, Yu Jin Hwang, et al.
Nat Med. 2014 Aug;20(8):886-96. doi: 10.1038/nm.3639. Epub 2014 Jun 29.
In Alzheimer's disease (AD), memory impairment is the most prominent feature that afflicts patients and their families. Although reactive astrocytes have been observed around amyloid plaques since the disease was first described, their role in memory impairment has been poorly understood. Here, we show that reactive astrocytes aberrantly and abundantly produce the inhibitory gliotransmitter GABA by monoamine oxidase-B (Maob) and abnormally release GABA through the bestrophin 1 channel. In the dentate gyrus of mouse models of AD, the released GABA reduces spike probability of granule cells by acting on presynaptic GABA receptors. Suppressing GABA production or release from reactive astrocytes fully restores the impaired spike probability, synaptic plasticity, and learning and memory in the mice. In the postmortem brain of individuals with AD, astrocytic GABA and MAOB are significantly upregulated. We propose that selective inhibition of astrocytic GABA synthesis or release may serve as an effective therapeutic strategy for treating memory impairment in AD.

121Extracellular Matrix Remodeling Alleviates Memory Deficits in Alzheimer's Disease by Enhancing the Astrocytic Autophagy-Lysosome Pathway.PubMed

Qinghu Yang, Chengxiang Yan, Yahan Sun, et al.
Adv Sci (Weinh). 2024 Aug;11(31):e2400480. doi: 10.1002/advs.202400480. Epub 2024 Jun 17.
Extracellular matrix (ECM) remodeling is strongly linked to Alzheimer's disease (AD) risk; however, the underlying mechanisms are not fully understood. Here, it is found that the injection of chondroitinase ABC (ChABC), mimicking ECM remodeling, into the medial prefrontal cortex (mPFC) reversed short-term memory loss and reduced amyloid-beta (Aβ) deposition in 5xFAD mice. ECM remodeling also reactivated astrocytes, reduced the levels of aggrecan in Aβ plaques, and enhanced astrocyte recruitment to surrounding plaques. Importantly, ECM remodeling enhanced the autophagy-lysosome pathway in astrocytes, thereby mediating Aβ clearance and alleviating AD pathology. ECM remodeling also promoted Aβ plaque phagocytosis by astrocytes by activating the astrocytic phagocytosis receptor MERTK and promoting astrocytic vesicle circulation. The study identified a cellular mechanism in which ECM remodeling activates the astrocytic autophagy-lysosomal pathway and alleviates AD pathology. Targeting ECM remodeling may represent a potential therapeutic strategy for AD and serve as a reference for the treatment of this disease.

122Adult neurogenesis in Alzheimer's disease.PubMed

Se Hoon Choi, Rudolph E Tanzi
Hippocampus. 2023 Apr;33(4):307-321. doi: 10.1002/hipo.23504. Epub 2023 Feb 7.
Alzheimer's disease (AD) is the most common form of age-related dementia, characterized by progressive memory loss and cognitive disturbances. The hippocampus, where adult hippocampal neurogenesis (AHN), a relatively novel form of brain plasticity that refers to the birth of new neurons, occurs, is one of the first brain regions to be affected in AD patients. Recent studies showed that AHN persists throughout life in humans, but it drops sharply in AD patients. Next questions to consider would be whether AHN impairment is a contributing factor to learning and memory impairment in AD and whether restoring AHN could ameliorate or delay cognitive dysfunction. Here, we outline and discuss the current knowledge about the state of AHN in AD patients, AHN impairment as a potentially relevant mechanism underlying memory deficits in AD, therapeutic potential of activating AHN in AD, and the mechanisms of AHN impairment in AD.

123Rationale for a Multi-Factorial Approach for the Reversal of Cognitive Decline in Alzheimer's Disease and MCI: A Review.PubMed

Rammohan V Rao, Kaavya G Subramaniam, Julie Gregory, et al.
Int J Mol Sci. 2023 Jan 14;24(2):1659. doi: 10.3390/ijms24021659.
Alzheimer's disease (AD) is a multifactorial, progressive, neurodegenerative disease typically characterized by memory loss, personality changes, and a decline in overall cognitive function. Usually manifesting in individuals over the age of 60, this is the most prevalent type of dementia and remains the fifth leading cause of death among Americans aged 65 and older. While the development of effective treatment and prevention for AD is a major healthcare goal, unfortunately, therapeutic approaches to date have yet to find a treatment plan that produces long-term cognitive improvement. Drugs that may be able to slow down the progression rate of AD are being introduced to the market; however, there has been no previous solution for preventing or reversing the disease-associated cognitive decline. Recent studies have identified several factors that contribute to the progression and severity of the disease: diet, lifestyle, stress, sleep, nutrient deficiencies, mental health, socialization, and toxins. Thus, increasing evidence supports dietary and other lifestyle changes as potentially effective ways to prevent, slow, or reverse AD progression. Studies also have demonstrated that a personalized, multi-therapeutic approach is needed to improve metabolic abnormalities and AD-associated cognitive decline. These studies suggest the effects of abnormalities, such as insulin resistance, chronic inflammation, hypovitaminosis D, hormonal deficiencies, and hyperhomocysteinemia, in the AD process. Therefore a personalized, multi-therapeutic program based on an individual's genetics and biochemistry may be preferable over a single-drug/mono-therapeutic approach. This article reviews these multi-therapeutic strategies that identify and attenuate all the risk factors specific to each affected individual. This article systematically reviews studies that have incorporated multiple strategies that target numerous factors simultaneously to reverse or treat cognitive decline. We included high-quality clinical trials and observational studies that focused on the cognitive effects of programs comprising lifestyle, physical, and mental activity, as well as nutritional aspects. Articles from PubMed Central, Scopus, and Google Scholar databases were collected, and abstracts were reviewed for relevance to the subject matter. Epidemiological, pathological, toxicological, genetic, and biochemical studies have all concluded that AD represents a complex network insufficiency. The research studies explored in this manuscript confirm the need for a multifactorial approach to target the various risk factors of AD. A single-drug approach may delay the progression of memory loss but, to date, has not prevented or reversed it. Diet, physical activity, sleep, stress, and environment all contribute to the progression of the disease, and, therefore, a multi-factorial optimization of network support and function offers a rational therapeutic strategy. Thus, a multi-therapeutic program that simultaneously targets multiple factors underlying the AD network may be more effective than a mono-therapeutic approach.

124Angelica polysaccharide ameliorates memory impairment in Alzheimer's disease rat through activating BDNF/TrkB/CREB pathway.PubMed

Qian Du, Xiaoyu Zhu, Jieru Si
Exp Biol Med (Maywood). 2020 Jan;245(1):1-10. doi: 10.1177/1535370219894558. Epub 2019 Dec 17.
UNLABELLED: This study aimed to investigate the effect of Angelica sinensis polysaccharides (ASP) on Alzheimer’s disease (AD) and its underlying mechanisms. In our study, we build the AD model by injecting Aβ. Morris water maze (MWM) was applied to investigate learning and memory. Moreover, neurotransmitters, free radical, and inflammatory factors were also measured. Pathological change and neuronal death in hippocampus CA1, CA3, and DG region were detected by HE staining and Nissl staining. The neuronal apoptosis was detected by TUNEL. The expressions of caspase-3, Bcl-2 and Bax were measured by immunohistochemistry and Western blot. The expressions of BDNF, TrkB, p-Akt, Akt, p-CREB, and CREB were measured by Western blot. Our results showed that ASP could ameliorate spatial learning and memory deficiency in AD rats. ASP decreased AchE level and increased the levels of Ach and chAT in AD rats. ASP could increase the activity of SOD and CAT, decrease MDA activity, and inhibit the expression levels of inflammatory factors and neurons apoptosis in AD rats. Pathological change of hippocampus CA1, CA3, and DG region was ameliorated by ASP. In addition, the effects of ASP were reversed by K252a (TrkB inhibitor). Our study demonstrated that ASP could ameliorate memory impairment in AD rat through activating BDNF/TrkB/CREB pathway. IMPACT STATEMENT: The present study demonstrated that ASP could ameliorate memory impairment through regulation of the balance of neurotransmitters, free radical metabolism, inflammation, and neurons apoptosis. Moreover, the mechanism of ASP on memory impairment may be related to BDNF/TrkB/CREB pathway in AD. Our research provides an innovatively regulatory mechanism about the ASP in AD rat and points a new way to the treatment of AD.

125Senktide blocks aberrant RTN3 interactome to retard memory decline and tau pathology in social isolated Alzheimer's disease mice.PubMed

He-Zhou Huang, Wen-Qing Ai, Na Wei, et al.
Protein Cell. 2024 Apr 1;15(4):261-284. doi: 10.1093/procel/pwad056.
Sporadic or late-onset Alzheimer's disease (LOAD) accounts for more than 95% of Alzheimer's disease (AD) cases without any family history. Although genome-wide association studies have identified associated risk genes and loci for LOAD, numerous studies suggest that many adverse environmental factors, such as social isolation, are associated with an increased risk of dementia. However, the underlying mechanisms of social isolation in AD progression remain elusive. In the current study, we found that 7 days of social isolation could trigger pattern separation impairments and presynaptic abnormalities of the mossy fibre-CA3 circuit in AD mice. We also revealed that social isolation disrupted histone acetylation and resulted in the downregulation of 2 dentate gyrus (DG)-enriched miRNAs, which simultaneously target reticulon 3 (RTN3), an endoplasmic reticulum protein that aggregates in presynaptic regions to disturb the formation of functional mossy fibre boutons (MFBs) by recruiting multiple mitochondrial and vesicle-related proteins. Interestingly, the aggregation of RTN3 also recruits the PP2A B subunits to suppress PP2A activity and induce tau hyperphosphorylation, which, in turn, further elevates RTN3 and forms a vicious cycle. Finally, using an artificial intelligence-assisted molecular docking approach, we determined that senktide, a selective agonist of neurokinin3 receptors (NK3R), could reduce the binding of RTN3 with its partners. Moreover, application of senktide in vivo effectively restored DG circuit disorders in socially isolated AD mice. Taken together, our findings not only demonstrate the epigenetic regulatory mechanism underlying mossy fibre synaptic disorders orchestrated by social isolation and tau pathology but also reveal a novel potential therapeutic strategy for AD.

126Memory and Forgetting.PubMed

Chris R Brewin
Curr Psychiatry Rep. 2018 Aug 28;20(10):87. doi: 10.1007/s11920-018-0950-7.
PURPOSE OF REVIEW: I summarize recent developments in understanding the phenomenology of memory in PTSD, describe the most prominent theoretical models, and outline new forms of treatment aimed at modifying the traumatic memory. RECENT FINDINGS: Intrusive memories that have the quality of being relived in the present have been highlighted in ICD-11. Debate over whether trauma memories are disorganized has led to a distinction between global narratives that are usually well rehearsed and episodic memories of the most frightening moments when disruptions and fragmentation may occur. Attempts to prevent the initial consolidation of trauma memories have promise in prevention but face practical difficulties. Theoretical developments have led to a number of promising treatments for established PTSD including pre-retrieval propranolol and imagery rescripting. Research has suggested real possibilities to improve the prevention and treatment of PTSD by modifying trauma recall even though the theoretical basis for these interventions remains controversial.

127[Memory alterations in post-traumatic stress disorder].PubMed

Lucie Da Costa Silva, Mickaël Laisney, Laura Charretier, et al.
Biol Aujourdhui. 2023;217(1-2):55-64. doi: 10.1051/jbio/2023018. Epub 2023 Jul 6.
Post-Traumatic Stress Disorder (PTSD) is a disorder that develops following the experience of a highly stressful event, which involves a confrontation with death or the threat of death, serious injury or sexual violence. It is characterized by symptoms such as intrusions, avoidance and hypervigilance. According to the literature, PTSD is associated with an imbalance between a privileged memorization of the emotional and sensory aspects of the traumatic event and a failure to memorize the contextual aspects. That is why PTSD is now considered a memory disorder whose effects extend to several components. In this review article, we focus on how PTSD affects long-term memory. The first part describes the long-term effects of PTSD on episodic memory with emphasis on the difficulties in encoding certain elements of the traumatic event and their consequences. These difficulties may be manifested in the narration of the trauma, with a discourse of the traumatic event lacking in contextual details. They may also lead to reliving and generalizing the fear to other contexts, whether they are related to the trauma or not. The second part of the article discusses how PTSD affects autobiographical memory and has consequences for the construction of identity and the perception of the past, present and future of people with this disorder. Autobiographical memory, which plays a key role in the storage of past personal memories as well as in identity formation, shows several forms of disruption induced by PTSD. First, a decrease in contextual details associated with memories of the personal past is observed, meaning that people with PTSD tend to remember their past experiences less accurately. Second, a propensity to project the future in a more negative and unpredictable manner is evidenced, related to a feeling of uncertainty about the future in PTSD suffering individuals. Finally, alterations in the encoding of present events due to the disruptive effects of post-traumatic stress symptoms during the encoding process are also identified.

128Neurobiology of amnesia.PubMed

L R Squire, H P Davis, C W Spanis
Science. 1980 Aug 15;209(4458):836-7. doi: 10.1126/science.7190729.

129Dissociative amnesia.PubMed

Angelica Staniloiu, Hans J Markowitsch
Lancet Psychiatry. 2014 Aug;1(3):226-41. doi: 10.1016/S2215-0366(14)70279-2. Epub 2014 Jul 2.
Dissociative amnesia is one of the most enigmatic and controversial psychiatric disorders. In the past two decades, interest in the understanding of its pathophysiology has surged. In this report, we review new data about the epidemiology, neurobiology, and neuroimaging of dissociative amnesia and show how advances in memory research and neurobiology of dissociation inform proposed pathogenetic models of the disorder. Dissociative amnesia is characterised by functional impairment. Additionally, preliminary data suggest that affected people have an increased and possibly underestimated suicide risk. The prevalence of dissociative amnesia differs substantially across countries and populations. Symptoms and disease course also vary, indicating a possibly heterogeneous disorder. The accompanying clinical features differ across cultural groups. Most dissociative amnesias are retrograde, with memory impairments mainly involving the episodic-autobiographical memory domain. Anterograde dissociative amnesia occurring without significant retrograde memory impairments is rare. Functional neuroimaging studies of dissociative amnesia with prevailing retrograde memory impairments show changes in the network that subserves autobiographical memory. At present, no evidence-based treatments are available for dissociative amnesia and no broad framework exists for its rehabilitation. Further research is needed into its neurobiology, course, treatment options, and strategies to improve differential diagnoses.

130Neurobiology of autoimmune encephalitis.PubMed

Masaki Fukata, Norihiko Yokoi, Yuko Fukata
Curr Opin Neurobiol. 2018 Feb;48:1-8. doi: 10.1016/j.conb.2017.07.012. Epub 2017 Aug 19.
Autoimmune encephalitis presenting with amnesia, seizures, and psychosis is highly topical in basic and clinical neuroscience. Recent studies have identified numerous associated autoantibodies, targeting cell-surface synaptic proteins including neurotransmitter receptors (e.g. NMDA receptors (NMDARs)) and a secreted protein, LGI1. In vitro and in vivo analyses of the influence of the autoantibodies have begun to clarify their causal roles. Of particular interest is the generation of recombinant monoclonal antibodies from patients' B cells with anti-NMDAR encephalitis. Patient monoclonal antibodies could be useful to reveal their direct, detailed pathogenicity. Such identification and characterization of autoantibodies could create new categories of neurological diseases and promote the understanding of patho-physiologic roles of target proteins in human brain function.

131Consciousness and anesthesia.PubMed

Michael T Alkire, Anthony G Hudetz, Giulio Tononi
Science. 2008 Nov 7;322(5903):876-80. doi: 10.1126/science.1149213.
When we are anesthetized, we expect consciousness to vanish. But does it always? Although anesthesia undoubtedly induces unresponsiveness and amnesia, the extent to which it causes unconsciousness is harder to establish. For instance, certain anesthetics act on areas of the brain's cortex near the midline and abolish behavioral responsiveness, but not necessarily consciousness. Unconsciousness is likely to ensue when a complex of brain regions in the posterior parietal area is inactivated. Consciousness vanishes when anesthetics produce functional disconnection in this posterior complex, interrupting cortical communication and causing a loss of integration; or when they lead to bistable, stereotypic responses, causing a loss of information capacity. Thus, anesthetics seem to cause unconsciousness when they block the brain's ability to integrate information.

132Therapeutic potential of natural molecules against Alzheimer's disease via SIRT1 modulation.PubMed

Mingming Zhang, Zhiyin Tang
Biomed Pharmacother. 2023 May;161:114474. doi: 10.1016/j.biopha.2023.114474. Epub 2023 Mar 4.
Alzheimer's disease (AD) is a neurodegenerative disease mainly characterized by progressive cognitive dysfunction and memory impairment. Recent studies have shown that regulating silent information regulator 1 (SIRT1) expression has a significant neuroprotective effect, and SIRT1 may become a new therapeutic target for AD. Natural molecules are an important source of drug development for use in AD therapy and may regulate a wide range of biological events by regulating SIRT1 as well as other SIRT1-mediated signaling pathways. This review aims to summarize the correlation between SIRT1 and AD and to identify in vivo and in vitro studies investigating the anti-AD properties of natural molecules as modulators of SIRT1 and SIRT1-mediated signaling pathways. A literature search was conducted for studies published between January 2000 and October 2022 using various literature databases, including Web of Science, PubMed, Google Scholar, Science Direct, and EMBASE. Natural molecules, such as resveratrol, quercetin, icariin, bisdemethoxycurcumin, dihydromyricetin, salidroside, patchouli, sesamin, rhein, ligustilide, tetramethoxyflavanone, 1-theanine, schisandrin, curcumin, betaine, pterostilbene, ampelopsin, schisanhenol, and eriodictyol, have the potential to modulate SIRT1 and SIRT1 signaling pathways, thereby combating AD. The natural molecules modulating SIRT1 discussed in this review provide a potentially novel multi-mechanistic therapeutic strategy for AD. However, future clinical trials need to be conducted to further investigate their beneficial properties and to determine the safety and efficacy of SIRT1 natural activators against AD.

133Development of novel phosphodiesterase 5 inhibitors for the therapy of Alzheimer's disease.PubMed

Elisa Zuccarello, Erica Acquarone, Elisa Calcagno, et al.
Biochem Pharmacol. 2020 Jun;176:113818. doi: 10.1016/j.bcp.2020.113818. Epub 2020 Jan 21.
Nitric oxide (NO) is a gaseous molecule that plays a multifactorial role in several cellular processes. In the central nervous system, the NO dual nature in neuroprotection and neurotoxicity has been explored to unveil its involvement in Alzheimer's disease (AD). A growing body of research shows that the activation of the NO signaling pathway leading to the phosphorylation of the transcription factor cyclic adenine monophosphate responsive element binding protein (CREB) (so-called NO/cGMP/PKG/CREB signaling pathway) ameliorates altered neuroplasticity and memory deficits in AD animal models. In addition to NO donors, several other pharmacological agents, such as phosphodiesterase 5 (PDE5) inhibitors have been used to activate the pathway and rescue memory disorders. PDE5 inhibitors, including sildenafil, tadalafil and vardenafil, are marketed for the treatment of erectile dysfunction and arterial pulmonary hypertension due to their vasodilatory properties. The ability of PDE5 inhibitors to interfere with the NO/cGMP/PKG/CREB signaling pathway by increasing the levels of cGMP has prompted the hypothesis that PDE5 inhibition might be used as an effective therapeutic strategy for the treatment of AD. To this end, newly designed PDE5 inhibitors belonging to different chemical classes with improved pharmacologic profile (e.g. higher potency, improved selectivity, and blood-brain barrier penetration) have been synthesized and evaluated in several animal models of AD. In addition, recent medicinal chemistry effort has led to the development of agents concurrently acting on the PDE5 enzyme and a second target involved in AD. Both marketed and investigational PDE5 inhibitors have shown to reverse cognitive defects in young and aged wild type mice as well as transgenic mouse models of AD and tauopathy using a variety of behavioral tasks. These studies confirmed the therapeutic potential of PDE5 inhibitors as cognitive enhancers. However, clinical studies assessing cognitive functions using marketed PDE5 inhibitors have not been conclusive. Drug discovery efforts by our group and others are currently directed towards the development of novel PDE5 inhibitors tailored to AD with improved pharmacodynamic and pharmacokinetic properties. In summary, the present perspective reports an overview of the correlation between the NO signaling and AD, as well as an outline of the PDE5 inhibitors used as an alternative approach in altering the NO pathway leading to an improvement of learning and memory. The last two sections describe the preclinical and clinical evaluation of PDE5 inhibitors for the treatment of AD, providing a comprehensive analysis of the current status of the AD drug discovery efforts involving PDE5 as a new therapeutic target.

134A systematic review and meta-analysis of rTMS effects on cognitive enhancement in mild cognitive impairment and Alzheimer's disease.PubMed

Ying-Hui Chou, Viet Ton That, Mark Sundman
Neurobiol Aging. 2020 Feb;86:1-10. doi: 10.1016/j.neurobiolaging.2019.08.020. Epub 2019 Aug 27.
Repetitive transcranial magnetic stimulation (rTMS), a noninvasive brain stimulation technique, has emerged as a promising treatment for mild cognitive impairment (MCI) and Alzheimer's disease (AD). Currently, however, the effectiveness of this therapy is unclear because of the low statistical power and heterogeneity of previous trials. The purpose of the meta-analysis was to systematically characterize the effectiveness of various combinations of rTMS parameters on different cognitive domains in patients with MCI and AD. Thirteen studies comprising 293 patients with MCI or AD were included in this analysis. Random-effects analysis revealed an overall medium-to-large effect size (0.77) favoring active rTMS over sham rTMS in the improvement of cognitive functions. Subgroup analyses revealed that (1) high-frequency rTMS over the left dorsolateral prefrontal cortex and low-frequency rTMS at the right dorsolateral prefrontal cortex significantly improved memory functions; (2) high-frequency rTMS targeting the right inferior frontal gyrus significantly enhanced executive performance; and (3) the effects of 5-30 consecutive rTMS sessions could last for 4-12 weeks. Potential mechanisms of rTMS effects on cognitive functions are discussed.

135Transcranial magnetic stimulation of the precuneus enhances memory and neural activity in prodromal Alzheimer's disease.PubMed

Giacomo Koch, Sonia Bonnì, Maria Concetta Pellicciari, et al.
Neuroimage. 2018 Apr 1;169:302-311. doi: 10.1016/j.neuroimage.2017.12.048. Epub 2017 Dec 19.
Memory loss is one of the first symptoms of typical Alzheimer's disease (AD), for which there are no effective therapies available. The precuneus (PC) has been recently emphasized as a key area for the memory impairment observed in early AD, likely due to disconnection mechanisms within large-scale networks such as the default mode network (DMN). Using a multimodal approach we investigated in a two-week, randomized, sham-controlled, double-blinded trial the effects of high-frequency repetitive transcranial magnetic stimulation (rTMS) of the PC on cognition, as measured by the Alzheimer Disease Cooperative Study Preclinical Alzheimer Cognitive Composite in 14 patients with early AD (7 females). TMS combined with electroencephalography (TMS-EEG) was used to detect changes in brain connectivity. We found that rTMS of the PC induced a selective improvement in episodic memory, but not in other cognitive domains. Analysis of TMS-EEG signal revealed an increase of neural activity in patients' PC, an enhancement of brain oscillations in the beta band and a modification of functional connections between the PC and medial frontal areas within the DMN. Our findings show that high-frequency rTMS of the PC is a promising, non-invasive treatment for memory dysfunction in patients at early stages of AD. This clinical improvement is accompanied by modulation of brain connectivity, consistently with the pathophysiological model of brain disconnection in AD.

136Efficacy and Safety of Repetitive Transcranial Magnetic Stimulation for Poststroke Memory Disorder: A Meta-Analysis and Systematic Review.PubMed

Haihua Xie, Shiyang Luo, Dan Xiong, et al.
J Integr Neurosci. 2023 Sep 5;22(5):131. doi: 10.31083/j.jin2205131.
BACKGROUND: Patients with post-stroke memory disorder (PSMD) have poor quality of life and it is necessary to identify more beneficial stimulation protocols for treatment with repetitive transcranial magnetic stimulation (rTMS). This meta-analysis was conducted to investigate the efficacy and safety of rTMS for improving memory performance, global cognition, and activities of daily living (ADL) among patients with PSMD. METHODS: The PubMed, Embase, Cochrane Central Register of Controlled Trials (CENTRAL), Chinese Biomedical Literature Database, Chinese National Knowledge Infrastructure, China Science and Technology Journal Database, and Wanfang databases were screened to identify relevant randomized controlled trials. The primary outcome was memory performance; secondary outcomes included global cognition, ADL, and adverse events. STATA software was used to perform data synthesis. RESULTS: Five articles with a total of 192 participants were included. The results indicated that rTMS was superior to control treatments for improving memory performance (mean difference [MD] = 1.73, 95% CI [Confidence Interval] [0.85, 2.60], 0.001), global cognition (MD = 2.44, 95% CI [0.96, 3.93], 0.001), and ADL (MD = 10.29, 95% CI [5.10, 15.48], 0.001). No significant differences were found between the low-frequency (LF) and high-frequency (HF) rTMS subgroups ( 0.47, = 0.00%) or between the sham rTMS and non-rTMS subgroups ( 0.94, = 0.00%). Four studies did not reported adverse events. CONCLUSIONS: rTMS may improve memory function, global cognition, and the ability to perform ADL in patients with PSMD. LF-rTMS and HF-rTMS may have equal efficacy for treatment of PSMD. Future studies should consider extending the follow-up period to explore the safety and long-term efficacy of rTMS for treatment of PSMD and the appropriate choice of placebo for clinical trials of this treatment.

137Targeted memory reactivation to augment treatment in post-traumatic stress disorder.PubMed

Anna C van der Heijden, Ysbrand D van der Werf, Odile A van den Heuvel, et al.
Curr Biol. 2024 Aug 19;34(16):3735-3746.e5. doi: 10.1016/j.cub.2024.07.019. Epub 2024 Aug 7.
Post-traumatic stress disorder (PTSD) is a psychiatric disorder with traumatic memories at its core. Post-treatment sleep may offer a unique time window to increase therapeutic efficacy through consolidation of therapeutically modified traumatic memories. Targeted memory reactivation (TMR) enhances memory consolidation by presenting reminder cues (e.g., sounds associated with a memory) during sleep. Here, we applied TMR in PTSD patients to strengthen therapeutic memories during sleep after one treatment session with eye movement desensitization and reprocessing (EMDR). PTSD patients received either slow oscillation (SO) phase-targeted TMR, using modeling-based closed-loop neurostimulation (M-CLNS) with EMDR clicks as a reactivation cue (n = 17), or sham stimulation (n = 16). Effects of TMR on sleep were assessed through high-density polysomnography. Effects on treatment outcome were assessed through subjective, autonomic, and fMRI responses to script-driven imagery (SDI) of the targeted traumatic memory and overall PTSD symptom level. Compared to sham stimulation, TMR led to stimulus-locked increases in SO and spindle dynamics, which correlated positively with PTSD symptom reduction in the TMR group. Given the role of SOs and spindles in memory consolidation, these findings suggest that TMR may have strengthened the consolidation of the EMDR-treatment memory. Clinically, TMR vs. sham stimulation resulted in a larger reduction of avoidance level during SDI. TMR did not disturb sleep or trigger nightmares. Together, these data provide first proof of principle that TMR may be a safe and viable future treatment augmentation strategy for PTSD. The required follow-up studies may implement multi-night TMR or TMR during REM sleep to further establish the clinical effect of TMR for traumatic memories.

138Hippocampal Mechanisms Support Cortisol-Induced Memory Enhancements.PubMed

Brynn E Sherman, Bailey B Harris, Nicholas B Turk-Browne, et al.
J Neurosci. 2023 Oct 25;43(43):7198-7212. doi: 10.1523/JNEUROSCI.0916-23.2023. Epub 2023 Oct 9.
Stress can powerfully influence episodic memory, often enhancing memory encoding for emotionally salient information. These stress-induced memory enhancements stand at odds with demonstrations that stress and the stress-related hormone cortisol can negatively affect the hippocampus, a brain region important for episodic memory encoding. To resolve this apparent conflict and determine whether and how the hippocampus supports memory encoding under cortisol, we combined behavioral assays of associative memory, high-resolution fMRI, and pharmacological manipulation of cortisol in a within-participant, double-blinded procedure (in both sexes). Behaviorally, hydrocortisone promoted the encoding of subjectively arousing, positive associative memories. Neurally, hydrocortisone led to enhanced functional connectivity between hippocampal subregions, which predicted subsequent memory enhancements for emotional associations. Cortisol also modified the relationship between hippocampal representations and associative memory: whereas hippocampal signatures of distinctiveness predicted memory under placebo, relative integration predicted memory under cortisol. Together, these data provide novel evidence that the human hippocampus contains the necessary machinery to support emotional associative memory enhancements under cortisol. Our daily lives are filled with stressful events, which powerfully shape the way we form episodic memories. For example, stress and stress-related hormones can enhance our memory for emotional events. However, the mechanisms underlying these memory benefits are unclear. In the current study, we combined functional neuroimaging, behavioral tests of memory, and double-blind, placebo-controlled hydrocortisone administration to uncover the effects of the stress-related hormone cortisol on the function of the human hippocampus, a brain region important for episodic memory. We identified novel ways in which cortisol can enhance hippocampal function to promote emotional memories, highlighting the adaptive role of cortisol in shaping memory formation.

139Predicting visual working memory with multimodal magnetic resonance imaging.PubMed

Yu Xiao, Ying Lin, Junji Ma, et al.
Hum Brain Mapp. 2021 Apr 1;42(5):1446-1462. doi: 10.1002/hbm.25305. Epub 2020 Dec 5.
The indispensability of visual working memory (VWM) in human daily life suggests its importance in higher cognitive functions and neurological diseases. However, despite the extensive research efforts, most findings on the neural basis of VWM are limited to a unimodal context (either structure or function) and have low generalization. To address the above issues, this study proposed the usage of multimodal neuroimaging in combination with machine learning to reveal the neural mechanism of VWM across a large cohort (N = 547). Specifically, multimodal magnetic resonance imaging features extracted from voxel-wise amplitude of low-frequency fluctuations, gray matter volume, and fractional anisotropy were used to build an individual VWM capacity prediction model through a machine learning pipeline, including the steps of feature selection, relevance vector regression, cross-validation, and model fusion. The resulting model exhibited promising predictive performance on VWM (r = .402, p < .001), and identified features within the subcortical-cerebellum network, default mode network, motor network, corpus callosum, anterior corona radiata, and external capsule as significant predictors. The main results were then compared with those obtained on emotional regulation and fluid intelligence using the same pipeline, confirming the specificity of our findings. Moreover, the main results maintained well under different cross-validation regimes and preprocess strategies. These findings, while providing richer evidence for the importance of multimodality in understanding cognitive functions, offer a solid and general foundation for comprehensively understanding the VWM process from the top down.

140The brain's default network: updated anatomy, physiology and evolving insights.PubMed

Randy L Buckner, Lauren M DiNicola
Nat Rev Neurosci. 2019 Oct;20(10):593-608. doi: 10.1038/s41583-019-0212-7. Epub 2019 Sep 6.
Discoveries over the past two decades demonstrate that regions distributed throughout the association cortex, often called the default network, are suppressed during tasks that demand external attention and are active during remembering, envisioning the future and making social inferences. This Review describes progress in understanding the organization and function of networks embedded within these association regions. Detailed high-resolution analyses of single individuals suggest that the default network is not a single network, as historically described, but instead comprises multiple interwoven networks. The multiple networks share a common organizational motif (also evident in marmoset and macaque anatomical circuits) that might support a general class of processing function dependent on internally constructed rather than externally constrained representations, with each separate interwoven network specialized for a distinct processing domain. Direct neuronal recordings in humans and monkeys reveal evidence for competitive relationships between the internally and externally oriented networks. Findings from rodent studies suggest that the thalamus might be essential to controlling which networks are engaged through specialized thalamic reticular neurons, including antagonistic subpopulations. These association networks (and presumably thalamocortical circuits) are expanded in humans and might be particularly vulnerable to dysregulation implicated in mental illness.

141Creating a false memory in the hippocampus.PubMed

Steve Ramirez, Xu Liu, Pei-Ann Lin, et al.
Science. 2013 Jul 26;341(6144):387-91. doi: 10.1126/science.1239073.
Memories can be unreliable. We created a false memory in mice by optogenetically manipulating memory engram-bearing cells in the hippocampus. Dentate gyrus (DG) or CA1 neurons activated by exposure to a particular context were labeled with channelrhodopsin-2. These neurons were later optically reactivated during fear conditioning in a different context. The DG experimental group showed increased freezing in the original context, in which a foot shock was never delivered. The recall of this false memory was context-specific, activated similar downstream regions engaged during natural fear memory recall, and was also capable of driving an active fear response. Our data demonstrate that it is possible to generate an internally represented and behaviorally expressed fear memory via artificial means.

142Memory Engram Cells Have Come of Age.PubMed

Susumu Tonegawa, Xu Liu, Steve Ramirez, et al.
Neuron. 2015 Sep 2;87(5):918-31. doi: 10.1016/j.neuron.2015.08.002.
The idea that memory is stored in the brain as physical alterations goes back at least as far as Plato, but further conceptualization of this idea had to wait until the 20(th) century when two guiding theories were presented: the "engram theory" of Richard Semon and Donald Hebb's "synaptic plasticity theory." While a large number of studies have been conducted since, each supporting some aspect of each of these theories, until recently integrative evidence for the existence of engram cells and circuits as defined by the theories was lacking. In the past few years, the combination of transgenics, optogenetics, and other technologies has allowed neuroscientists to begin identifying memory engram cells by detecting specific populations of cells activated during specific learning epochs and by engineering them not only to evoke recall of the original memory, but also to alter the content of the memory.

143Population dynamics of head-direction neurons during drift and reorientation.PubMed

Zaki Ajabi, Alexandra T Keinath, Xue-Xin Wei, et al.
Nature. 2023 Mar;615(7954):892-899. doi: 10.1038/s41586-023-05813-2. Epub 2023 Mar 22.
The head direction (HD) system functions as the brain's internal compass, classically formalized as a one-dimensional ring attractor network. In contrast to a globally consistent magnetic compass, the HD system does not have a universal reference frame. Instead, it anchors to local cues, maintaining a stable offset when cues rotate and drifting in the absence of referents. However, questions about the mechanisms that underlie anchoring and drift remain unresolved and are best addressed at the population level. For example, the extent to which the one-dimensional description of population activity holds under conditions of reorientation and drift is unclear. Here we performed population recordings of thalamic HD cells using calcium imaging during controlled rotations of a visual landmark. Across experiments, population activity varied along a second dimension, which we refer to as network gain, especially under circumstances of cue conflict and ambiguity. Activity along this dimension predicted realignment and drift dynamics, including the speed of network realignment. In the dark, network gain maintained a 'memory trace' of the previously displayed landmark. Further experiments demonstrated that the HD network returned to its baseline orientation after brief, but not longer, exposures to a rotated cue. This experience dependence suggests that memory of previous associations between HD neurons and allocentric cues is maintained and influences the internal HD representation. Building on these results, we show that continuous rotation of a visual landmark induced rotation of the HD representation that persisted in darkness, demonstrating experience-dependent recalibration of the HD system. Finally, we propose a computational model to formalize how the neural compass flexibly adapts to changing environmental cues to maintain a reliable representation of HD. These results challenge classical one-dimensional interpretations of the HD system and provide insights into the interactions between this system and the cues to which it anchors.

144All-optical physiology resolves a synaptic basis for behavioral timescale plasticity.PubMed

Linlin Z Fan, Doo Kyung Kim, Joshua H Jennings, et al.
Cell. 2023 Feb 2;186(3):543-559.e19. doi: 10.1016/j.cell.2022.12.035. Epub 2023 Jan 19.
Learning has been associated with modifications of synaptic and circuit properties, but the precise changes storing information in mammals have remained largely unclear. We combined genetically targeted voltage imaging with targeted optogenetic activation and silencing of pre- and post-synaptic neurons to study the mechanisms underlying hippocampal behavioral timescale plasticity. In mice navigating a virtual-reality environment, targeted optogenetic activation of individual CA1 cells at specific places induced stable representations of these places in the targeted cells. Optical elicitation, recording, and modulation of synaptic transmission in behaving mice revealed that activity in presynaptic CA2/3 cells was required for the induction of plasticity in CA1 and, furthermore, that during induction of these place fields in single CA1 cells, synaptic input from CA2/3 onto these same cells was potentiated. These results reveal synaptic implementation of hippocampal behavioral timescale plasticity and define a methodology to resolve synaptic plasticity during learning and memory in behaving mammals.

145Decoding working memory-related information from repeated psychophysiological EEG experiments using convolutional and contrastive neural networks.PubMed

Jarosław Żygierewicz, Romuald A Janik, Igor T Podolak, et al.
J Neural Eng. 2022 Sep 5;19(4). doi: 10.1088/1741-2552/ac8b38.
Extracting reliable information from electroencephalogram (EEG) is difficult because the low signal-to-noise ratio and significant intersubject variability seriously hinder statistical analyses. However, recent advances in explainable machine learning open a new strategy to address this problem.The current study evaluates this approach using results from the classification and decoding of electrical brain activity associated with information retention. We designed four neural network models differing in architecture, training strategies, and input representation to classify single experimental trials of a working memory task.Our best models achieved an accuracy (ACC) of 65.29 ± 0.76 and Matthews correlation coefficient of 0.288 ± 0.018, outperforming the reference model trained on the same data. The highest correlation between classification score and behavioral performance was 0.36 (= 0.0007). Using analysis of input perturbation, we estimated the importance of EEG channels and frequency bands in the task at hand. The set of essential features identified for each network varies. We identified a subset of features common to all models that identified brain regions and frequency bands consistent with current neurophysiological knowledge of the processes critical to attention and working memory. Finally, we proposed sanity checks to examine further the robustness of each model's set of features.Our results indicate that explainable deep learning is a powerful tool for decoding information from EEG signals. It is crucial to train and analyze a range of models to identify stable and reliable features. Our results highlight the need for explainable modeling as the model with the highest ACC appeared to use residual artifactual activity.

146Generalizing neural signal-to-text brain-computer interfaces.PubMed

Janaki Sheth, Ariel Tankus, Michelle Tran, et al.
Biomed Phys Eng Express. 2021 Apr 30;7(3). doi: 10.1088/2057-1976/abf6ab.
Brain-Computer Interfaces (BCI) may help patients with faltering communication abilities due to neurodegenerative diseases produce text or speech by direct neural processing. However, their practical realization has proven difficult due to limitations in speed, accuracy, and generalizability of existing interfaces. The goal of this study is to evaluate the BCI performance of a robust speech decoding system that translates neural signals evoked by speech to a textual output. While previous studies have approached this problem by using neural signals to choose from a limited set of possible words, we employ a more general model that can type any word from a large corpus of English text.In this study, we create an end-to-end BCI that translates neural signals associated with overt speech into text output. Our decoding system first isolates frequency bands in the input depth-electrode signal encapsulating differential information regarding production of various phonemic classes. These bands form a feature set that then feeds into a Long Short-Term Memory (LSTM) model which discerns at each time point probability distributions across all phonemes uttered by a subject. Finally, a particle filtering algorithm temporally smooths these probabilities by incorporating prior knowledge of the English language to output text corresponding to the decoded word. The generalizability of our decoder is driven by the lack of a vocabulary constraint on this output word.This method was evaluated using a dataset of 6 neurosurgical patients implanted with intra-cranial depth electrodes to identify seizure foci for potential surgical treatment of epilepsy. We averaged 32% word accuracy and on the phoneme-level obtained 46% precision, 51% recall and 73.32% average phoneme error rate while also achieving significant increases in speed when compared to several other BCI approaches.Our study employs a more general neural signal-to-text model which could facilitate communication by patients in everyday environments.

147Towards neural co-processors for the brain: combining decoding and encoding in brain-computer interfaces.PubMed

Rajesh Pn Rao
Curr Opin Neurobiol. 2019 Apr;55:142-151. doi: 10.1016/j.conb.2019.03.008. Epub 2019 Apr 4.
The field of brain-computer interfaces is poised to advance from the traditional goal of controlling prosthetic devices using brain signals to combining neural decoding and encoding within a single neuroprosthetic device. Such a device acts as a 'co-processor' for the brain, with applications ranging from inducing Hebbian plasticity for rehabilitation after brain injury to reanimating paralyzed limbs and enhancing memory. We review recent progress in simultaneous decoding and encoding for closed-loop control and plasticity induction. To address the challenge of multi-channel decoding and encoding, we introduce a unifying framework for developing brain co-processors based on artificial neural networks and deep learning. These 'neural co-processors' can be used to jointly optimize cost functions with the nervous system to achieve desired behaviors ranging from targeted neuro-rehabilitation to augmentation of brain function.

148Memory dynamics in attractor networks.PubMed

Guoqi Li, Kiruthika Ramanathan, Ning Ning, et al.
Comput Intell Neurosci. 2015;2015:191745. doi: 10.1155/2015/191745. Epub 2015 Apr 19.
As can be represented by neurons and their synaptic connections, attractor networks are widely believed to underlie biological memory systems and have been used extensively in recent years to model the storage and retrieval process of memory. In this paper, we propose a new energy function, which is nonnegative and attains zero values only at the desired memory patterns. An attractor network is designed based on the proposed energy function. It is shown that the desired memory patterns are stored as the stable equilibrium points of the attractor network. To retrieve a memory pattern, an initial stimulus input is presented to the network, and its states converge to one of stable equilibrium points. Consequently, the existence of the spurious points, that is, local maxima, saddle points, or other local minima which are undesired memory patterns, can be avoided. The simulation results show the effectiveness of the proposed method.

149Toward the biological model of the hippocampus as the successor representation agent.PubMed

Hyunsu Lee
Biosystems. 2022 Mar;213:104612. doi: 10.1016/j.biosystems.2022.104612. Epub 2022 Jan 29.
The hippocampus is an essential brain region for spatial memory and learning. Recently, a theoretical model of the hippocampus based on temporal difference (TD) learning has been published. Inspired by the successor representation (SR) learning algorithms, which decompose value function of TD learning into reward and state transition, they argued that the rate of firing of CA1 place cells in the hippocampus represents the probability of state transition. This theory, called predictive map theory, claims that the hippocampus representing space learns the probability of transition from the current state to the future state. The neural correlates of expecting the future state are the firing rates of the CA1 place cells. This explanation is plausible for the results recorded in behavioral experiments, but it is lacking the neurobiological implications. Modifying the SR learning algorithm added biological implications to the predictive map theory. Similar with the simultaneous needs of information of the current and future state in the SR learning algorithm, the CA1 place cells receive two inputs from CA3 and entorhinal cortex. Mathematical transformation showed that the SR learning algorithm is equivalent to the heterosynaptic plasticity rule. The heterosynaptic plasticity phenomena in CA1 were discussed and compared with the modified SR update rule. This study attempted to interpret the TD algorithm as the neurobiological mechanism occurring in place learning, and to integrate the neuroscience and artificial intelligence approaches in the field.

150Neuron-astrocyte associative memory.PubMed

Leo Kozachkov, Jean-Jacques Slotine, Dmitry Krotov
Proc Natl Acad Sci U S A. 2025 May 27;122(21):e2417788122. doi: 10.1073/pnas.2417788122. Epub 2025 May 23.
Astrocytes, the most abundant type of glial cell, play a fundamental role in memory. Despite most hippocampal synapses being contacted by an astrocyte, there are no current theories that explain how neurons, synapses, and astrocytes might collectively contribute to memory function. We demonstrate that fundamental aspects of astrocyte morphology and physiology naturally lead to a dynamic, high-capacity associative memory system. The neuron-astrocyte networks generated by our framework are closely related to popular machine learning architectures known as Dense Associative Memories. Adjusting the connectivity pattern, the model developed here leads to a family of associative memory networks that includes a Dense Associative Memory and a Transformer as two limiting cases. In the known biological implementations of Dense Associative Memories, the ratio of stored memories to the number of neurons remains constant, despite the growth of the network size. Our work demonstrates that neuron-astrocyte networks follow a superior memory scaling law, outperforming known biological implementations of Dense Associative Memory. Our model suggests an exciting and previously unnoticed possibility that memories could be stored, at least in part, within the network of astrocyte processes rather than solely in the synaptic weights between neurons.

151Cellular computation and cognition.PubMed

W Tecumseh Fitch
Front Comput Neurosci. 2023 Nov 23;17:1107876. doi: 10.3389/fncom.2023.1107876. eCollection 2023.
Contemporary neural network models often overlook a central biological fact about neural processing: that single neurons are themselves complex, semi-autonomous computing systems. Both the information processing and information storage abilities of actual biological neurons vastly exceed the simple weighted sum of synaptic inputs computed by the "units" in standard neural network models. Neurons are eukaryotic cells that store information not only in synapses, but also in their dendritic structure and connectivity, as well as genetic "marking" in the epigenome of each individual cell. Each neuron computes a complex nonlinear function of its inputs, roughly equivalent in processing capacity to an entire 1990s-era neural network model. Furthermore, individual cells provide the biological interface between gene expression, ongoing neural processing, and stored long-term memory traces. Neurons in all organisms have these properties, which are thus relevant to all of neuroscience and cognitive biology. Single-cell computation may also play a particular role in explaining some unusual features of human cognition. The recognition of the centrality of cellular computation to "natural computation" in brains, and of the constraints it imposes upon brain evolution, thus has important implications for the evolution of cognition, and how we study it.

152Progress on deep learning in genomics.PubMed

Yan-Chun Bao, Cai-Xia Shi, Chuan-Qiang Zhang, et al.
Yi Chuan. 2024 Sep;46(9):701-715. doi: 10.16288/j.yczz.24-151.
With the rapid growth of data driven by high-throughput sequencing technologies, genomics has entered an era characterized by big data, which presents significant challenges for traditional bioinformatics methods in handling complex data patterns. At this critical juncture of technological progress, deep learning-an advanced artificial intelligence technology-offers powerful capabilities for data analysis and pattern recognition, revitalizing genomic research. In this review, we focus on four major deep learning models: Convolutional Neural Network(CNN), Recurrent Neural Network(RNN), Long Short-Term Memory(LSTM), and Generative Adversarial Network(GAN). We outline their core principles and provide a comprehensive review of their applications in DNA, RNA, and protein research over the past five years. Additionally, we also explore the use of deep learning in livestock genomics, highlighting its potential benefits and challenges in genetic trait analysis, disease prevention, and genetic enhancement. By delivering a thorough analysis, we aim to enhance precision and efficiency in genomic research through deep learning and offer a framework for developing and applying livestock genomic strategies, thereby advancing precision livestock farming and genetic breeding technologies.

153Computational Psychiatry and the Challenge of Schizophrenia.PubMed

John H Krystal, John D Murray, Adam M Chekroud, et al.
Schizophr Bull. 2017 May 1;43(3):473-475. doi: 10.1093/schbul/sbx025.
Schizophrenia research is plagued by enormous challenges in integrating and analyzing large datasets and difficulties developing formal theories related to the etiology, pathophysiology, and treatment of this disorder. Computational psychiatry provides a path to enhance analyses of these large and complex datasets and to promote the development and refinement of formal models for features of this disorder. This presentation introduces the reader to the notion of computational psychiatry and describes discovery-oriented and theory-driven applications to schizophrenia involving machine learning, reinforcement learning theory, and biophysically-informed neural circuit models.

154Developing a machine learning model for detecting depression, anxiety, and apathy in older adults with mild cognitive impairment using speech and facial expressions: A cross-sectional observational study.PubMed

Ying Zhou, Wei Han, Xiuyu Yao, et al.
Int J Nurs Stud. 2023 Oct;146:104562. doi: 10.1016/j.ijnurstu.2023.104562. Epub 2023 Jul 7.
BACKGROUND: Depression, anxiety, and apathy are highly prevalent in older people with preclinical dementia and mild cognitive impairment. These symptoms have also proven valuable in predicting the progression from mild cognitive impairment to dementia, enabling a timely diagnosis and treatment. However, objective and reliable indicators to detect and distinguish depression, anxiety, and apathy are relatively scarce. OBJECTIVE: This study aimed to develop a machine learning model to detect and distinguish depression, anxiety, and apathy based on speech and facial expressions. DESIGN: An observational, cross-sectional study design. SETTING(S): The memory outpatient department of a tertiary hospital. PARTICIPANTS: 319 older adults diagnosed with mild cognitive impairment. METHODS: Depression, anxiety, and apathy were evaluated by the Public Health Questionnaire, General Anxiety Disorder, and Apathy Evaluation Scale, respectively. Speech and facial expressions of older adults with mild cognitive impairment were digitally captured using audio and video recording software. Open-source data analysis toolkits were utilized to extract speech, facial, and text features. The multiclass classification was used to develop classification models, and shapely additive explanations were used to explain the contribution of each feature within the model. RESULTS: The random forest method was used to develop a multiclass emotion classification model, which performed well in classifying emotions with a weighted-average F1 score of 96.6 %. The model also demonstrated high accuracy, precision, and recall, with 87.4 %, 86.6 %, and 87.6 %, respectively. CONCLUSIONS: The machine learning model developed in this study demonstrated strong classification performance in detecting and differentiating depression, anxiety, and apathy. This innovative approach combines text, audio, and video to provide objective methods for precise classification and remote monitoring of these symptoms in nursing practice. REGISTRATION: This study was registered at the Chinese Clinical Trial Registry (registration number: ChiCTR1900023892; registration date: June 19th, 2019).

155Decoding IBS: a machine learning approach to psychological distress and gut-brain interaction.PubMed

Astri J Lundervold, Julie E Billing, Birgitte Berentsen, et al.
BMC Gastroenterol. 2024 Aug 15;24(1):267. doi: 10.1186/s12876-024-03355-z.
PURPOSE: Irritable bowel syndrome (IBS) is a diagnosis defined by gastrointestinal (GI) symptoms like abdominal pain and changes associated with defecation. The condition is classified as a disorder of the gut-brain interaction (DGBI), and patients with IBS commonly experience psychological distress. The present study focuses on this distress, defined from reports of fatigue, anxiety, depression, sleep disturbances, and performance on cognitive tests. The aim was to investigate the joint contribution of these features of psychological distress in predicting IBS versus healthy controls (HCs) and to disentangle clinically meaningful subgroups of IBS patients. METHODS: IBS patients ( ) and HCs ( ) completed the Chalder Fatigue Scale (CFQ), the Hamilton Anxiety and Depression Scale (HADS), and the Bergen Insomnia Scale (BIS), and performed tests of memory function and attention from the Repeatable Battery Assessing Neuropsychological Symptoms (RBANS). An initial exploratory data analysis was followed by supervised (Random Forest) and unsupervised (K-means) classification procedures. RESULTS: The explorative data analysis showed that the group of IBS patients obtained significantly more severe scores than HCs on all included measures, with the strongest pairwise correlation between fatigue and a quality measure of sleep disturbances. The supervised classification model correctly predicted belongings to the IBS group in 80% of the cases in a test set of unseen data. Two methods for calculating feature importance in the test set gave mental and physical fatigue and anxiety the strongest weights. An unsupervised procedure with showed that one cluster contained 24% of the patients and all but two HCs. In the two other clusters, their IBS members were overall more impaired, with the following differences. One of the two clusters showed more severe cognitive problems and anxiety symptoms than the other, which experienced more severe problems related to the quality of sleep and fatigue. The three clusters were not different on a severity measure of IBS and age. CONCLUSION: The results showed that psychological distress is an integral component of IBS symptomatology. The study should inspire future longitudinal studies to further dissect clinical patterns of IBS to improve the assessment and personalized treatment for this and other patient groups defined as disorders of the gut-brain interaction. The project is registered at https://classic. CLINICALTRIALS: gov/ct2/show/NCT04296552 20/05/2019.

156Understanding Image Memorability.PubMed

Nicole C Rust, Vahid Mehrpour
Trends Cogn Sci. 2020 Jul;24(7):557-568. doi: 10.1016/j.tics.2020.04.001. Epub 2020 May 5.
Why are some images easier to remember than others? Here, we review recent developments in our understanding of 'image memorability', including its behavioral characteristics, its neural correlates, and the optimization principles from which it originates. We highlight work that has used large behavioral data sets to leverage memorability scores computed for individual images. These studies demonstrate that the mapping of image content to image memorability is not only predictable, but also non-intuitive and multifaceted. This work has also led to insights into the neural correlates of image memorability, by way of the discovery of a type of population response magnitude variation that emerges in high-level visual cortex as well as higher stages of deep neural networks trained to categorize objects.

157Key-value memory in the brain.PubMed

Samuel J Gershman, Ila Fiete, Kazuki Irie
Neuron. 2025 Jun 4;113(11):1694-1707.e1. doi: 10.1016/j.neuron.2025.02.029. Epub 2025 Mar 26.
Classical models of memory in psychology and neuroscience rely on similarity-based retrieval of stored patterns, where similarity is a function of retrieval cues and the stored patterns. Although parsimonious, these models do not allow distinct representations for storage and retrieval, despite their distinct computational demands. Key-value memory systems, in contrast, distinguish representations used for storage (values) and those used for retrieval (keys). This allows key-value memory systems to optimize simultaneously for fidelity in storage and discriminability in retrieval. We review the computational foundations of key-value memory, its role in modern machine-learning systems, related ideas from psychology and neuroscience, applications to a number of empirical puzzles, and possible biological implementations.

158Reinforcement Learning, Fast and Slow.PubMed

Matthew Botvinick, Sam Ritter, Jane X Wang, et al.
Trends Cogn Sci. 2019 May;23(5):408-422. doi: 10.1016/j.tics.2019.02.006. Epub 2019 Apr 16.
Deep reinforcement learning (RL) methods have driven impressive advances in artificial intelligence in recent years, exceeding human performance in domains ranging from Atari to Go to no-limit poker. This progress has drawn the attention of cognitive scientists interested in understanding human learning. However, the concern has been raised that deep RL may be too sample-inefficient - that is, it may simply be too slow - to provide a plausible model of how humans learn. In the present review, we counter this critique by describing recently developed techniques that allow deep RL to operate more nimbly, solving problems much more quickly than previous methods. Although these techniques were developed in an AI context, we propose that they may have rich implications for psychology and neuroscience. A key insight, arising from these AI methods, concerns the fundamental connection between fast RL and slower, more incremental forms of learning.

159Contextualizing predictive minds.PubMed

Martin V Butz, Maximilian Mittenbühler, Sarah Schwöbel, et al.
Neurosci Biobehav Rev. 2025 Jan;168:105948. doi: 10.1016/j.neubiorev.2024.105948. Epub 2024 Nov 22.
The structure of human memory seems to be optimized for efficient prediction, planning, and behavior. We propose that these capacities rely on a tripartite structure of memory that includes concepts, events, and contexts-three layers that constitute the mental world model. We suggest that the mechanism that critically increases adaptivity and flexibility is the tendency to contextualize. This tendency promotes local, context-encoding abstractions, which focus event- and concept-based planning and inference processes on the task and situation at hand. As a result, cognitive contextualization offers a solution to the frame problem-the need to select relevant features of the environment from the rich stream of sensorimotor signals. We draw evidence for our proposal from developmental psychology and neuroscience. Adopting a computational stance, we present evidence from cognitive modeling research which suggests that context sensitivity is a feature that is critical for maximizing the efficiency of cognitive processes. Finally, we turn to recent deep-learning architectures which independently demonstrate how context-sensitive memory can emerge in a self-organized learning system constrained by cognitively-inspired inductive biases.

160Wake-Sleep Consolidated Learning.PubMed

Amelia Sorrenti, Giovanni Bellitto, Federica Proietto Salanitri, et al.
IEEE Trans Neural Netw Learn Syst. 2025 Jul;36(7):12668-12679. doi: 10.1109/TNNLS.2024.3458440.
We propose wake-sleep consolidated learning (WSCL), a learning strategy leveraging complementary learning system (CLS) theory and the wake-sleep phases of the human brain to improve the performance of deep neural networks (DNNs) for visual classification tasks in continual learning (CL) settings. Our method learns continually via the synchronization between distinct wake and sleep phases. During the wake phase, the model is exposed to sensory input and adapts its representations, ensuring stability through a dynamic parameter freezing mechanism and storing episodic memories in a short-term temporary memory (similar to what happens in the hippocampus). During the sleep phase, the training process is split into nonrapid eye movement (NREM) and rapid eye movement (REM) stages. In the NREM stage, the model's synaptic weights are consolidated using replayed samples from the short-term and long-term memory and the synaptic plasticity mechanism is activated, strengthening important connections and weakening unimportant ones. In the REM stage, the model is exposed to previously-unseen realistic visual sensory experience, and the dreaming process is activated, which enables the model to explore the potential feature space, thus preparing synapses for future knowledge. We evaluate the effectiveness of our approach on four benchmark datasets: CIFAR-10, CIFAR-100, Tiny-ImageNet, and FG-ImageNet. In all cases, our method outperforms the baselines and prior work, yielding a significant performance gain on continual visual classification tasks. Furthermore, we demonstrate the usefulness of all processing stages and the importance of dreaming to enable positive forward transfer (FWT). The code is available at: https://github.com/perceivelab/wscl.