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无义介导的mRNA降解(NMD)机制。

Nonsense-mediated mRNA decay (NMD) mechanisms.

作者信息

Brogna Saverio, Wen Jikai

机构信息

University of Birmingham, School of Biosciences, Edgbaston, Birmingham B15 2TT, UK.

出版信息

Nat Struct Mol Biol. 2009 Feb;16(2):107-13. doi: 10.1038/nsmb.1550.

DOI:10.1038/nsmb.1550
PMID:19190664
Abstract

Nonsense-mediated mRNA decay (NMD) is a translation-coupled mechanism that eliminates mRNAs containing premature translation-termination codons (PTCs). In mammalian cells, NMD is also linked to pre-mRNA splicing, as in many instances strong mRNA reduction occurs only when the PTC is located upstream of an intron. It is proposed that in these systems, the exon junction complex (EJC) mediates the link between splicing and NMD. Recent studies have questioned the role of splicing and the EJC in initiating NMD. Instead, they put forward a general and evolutionarily conserved mechanism in which the main regulator of NMD is the distance between a PTC and the poly(A) tail of an mRNA. Here we discuss the limitations of the new NMD model and the EJC concept; we argue that neither satisfactorily accounts for all of the available data and offer a new model to test in future studies.

摘要

无义介导的mRNA降解(NMD)是一种与翻译偶联的机制,可消除含有提前翻译终止密码子(PTC)的mRNA。在哺乳动物细胞中,NMD还与前体mRNA剪接相关,因为在许多情况下,只有当PTC位于内含子上游时,mRNA才会强烈减少。有人提出,在这些系统中,外显子连接复合体(EJC)介导剪接与NMD之间的联系。最近的研究对剪接和EJC在启动NMD中的作用提出了质疑。相反,他们提出了一种普遍且进化保守的机制,其中NMD的主要调节因子是PTC与mRNA的聚腺苷酸尾之间的距离。在这里,我们讨论了新的NMD模型和EJC概念的局限性;我们认为两者都不能令人满意地解释所有现有数据,并提供了一个新模型供未来研究进行测试。

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2
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本文引用的文献

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SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells.SMG6促进人类细胞中无义mRNA的核酸内切酶切割。
Nat Struct Mol Biol. 2009 Jan;16(1):49-55. doi: 10.1038/nsmb.1530. Epub 2008 Dec 7.
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SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan.SMG6是一种催化性核酸内切酶,可切割后生动物中含有无义密码子的mRNA。
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eIF3a cooperates with sequences 5' of uORF1 to promote resumption of scanning by post-termination ribosomes for reinitiation on GCN4 mRNA.
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Phenotypic Diversity of Marfan Syndrome.马凡综合征的表型多样性
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Inhibition of nonsense-mediated decay in TDP-43 deficient neurons reveals novel cryptic exons.在TDP - 43缺陷神经元中抑制无义介导的mRNA降解揭示了新的隐蔽外显子。
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Transcriptomic Analysis of Under Flow Velocity Stress.低流速应力的转录组学分析
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真核起始因子3a(eIF3a)与上游开放阅读框1(uORF1)5'端的序列协同作用,以促进终止后核糖体重新开始扫描,从而在GCN4信使核糖核酸(mRNA)上重新起始翻译。
Genes Dev. 2008 Sep 1;22(17):2414-25. doi: 10.1101/gad.480508.
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Widespread impact of nonsense-mediated mRNA decay on the yeast intronome.无义介导的mRNA降解对酵母内含子组的广泛影响。
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Alternative splicing resulting in nonsense-mediated mRNA decay: what is the meaning of nonsense?导致无义介导的mRNA降解的可变剪接:无义的含义是什么?
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NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements.NMD对于造血干细胞和祖细胞以及消除程序性DNA重排的副产物至关重要。
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PLoS Biol. 2008 Apr 29;6(4):e111. doi: 10.1371/journal.pbio.0060111.
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Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay.Upf1磷酸化在无义介导的mRNA衰变过程中触发翻译抑制。
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