植物源芳香族化合物的同时降解导致玫瑰杆菌谱系成员的生长增强。

Simultaneous catabolism of plant-derived aromatic compounds results in enhanced growth for members of the Roseobacter lineage.

机构信息

Department of Microbiology, University of Tennessee, Knoxville, TN, USA.

出版信息

Appl Environ Microbiol. 2013 Jun;79(12):3716-23. doi: 10.1128/AEM.00405-13. Epub 2013 Apr 5.

Abstract

Plant-derived aromatic compounds are important components of the dissolved organic carbon pool in coastal salt marshes, and their mineralization by resident bacteria contributes to carbon cycling in these systems. Members of the roseobacter lineage of marine bacteria are abundant in coastal salt marshes, and several characterized strains, including Sagittula stellata E-37, utilize aromatic compounds as primary growth substrates. The genome sequence of S. stellata contains multiple, potentially competing, aerobic ring-cleaving pathways. Preferential hierarchies in substrate utilization and complex transcriptional regulation have been demonstrated to be the norm in many soil bacteria that also contain multiple ring-cleaving pathways. The purpose of this study was to ascertain whether substrate preference exists in S. stellata when the organism is provided a mixture of aromatic compounds that proceed through different ring-cleaving pathways. We focused on the protocatechuate (pca) and the aerobic benzoyl coenzyme A (box) pathways and the substrates known to proceed through them, p-hydroxybenzoate (POB) and benzoate, respectively. When these two substrates were provided at nonlimiting carbon concentrations, temporal patterns of cell density, gene transcript abundance, enzyme activity, and substrate concentrations indicated that S. stellata simultaneously catabolized both substrates. Furthermore, enhanced growth rates were observed when S. stellata was provided both compounds simultaneously compared to the rates of cells grown singly with an equimolar concentration of either substrate alone. This simultaneous-catabolism phenotype was also demonstrated in another lineage member, Ruegeria pomeroyi DSS-3. These findings challenge the paradigm of sequential aromatic catabolism reported for soil bacteria and contribute to the growing body of physiological evidence demonstrating the metabolic versatility of roseobacters.

摘要

植物衍生的芳香族化合物是沿海盐沼溶解有机碳库的重要组成部分,其被驻留细菌矿化有助于这些系统中的碳循环。海洋细菌的玫瑰杆菌系成员在沿海盐沼中丰富,包括 Sagittula stellata E-37 在内的几个特征菌株利用芳香族化合物作为主要生长基质。S. stellata 的基因组序列包含多个潜在竞争的需氧环裂解途径。已经证明,在许多含有多个环裂解途径的土壤细菌中,优先利用底物和复杂的转录调控是常态。本研究的目的是确定当生物体提供通过不同环裂解途径的芳香族化合物混合物时,S. stellata 是否存在底物偏好。我们专注于原儿茶酸(PCA)和需氧苯甲酰辅酶 A(BOX)途径以及分别通过它们进行的已知底物对羟基苯甲酸(POB)和苯甲酸。当这两种底物以非限制碳浓度提供时,细胞密度、基因转录丰度、酶活性和底物浓度的时间模式表明 S. stellata 同时分解这两种底物。此外,与单独用等摩尔浓度的任一底物生长的细胞相比,当同时提供这两种化合物时,S. stellata 的生长速率得到增强。这种同时代谢表型也在另一个谱系成员 Ruegeria pomeroyi DSS-3 中得到证实。这些发现挑战了先前报道的土壤细菌中顺序芳香族代谢的范例,并为越来越多的生理证据做出了贡献,证明了玫瑰杆菌的代谢多功能性。

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