用于半合成头孢菌素生物转化的改良脱乙酰头孢菌素C合酶

Modified Deacetylcephalosporin C Synthase for the Biotransformation of Semisynthetic Cephalosporins.

作者信息

Balakrishnan Nataraj, Ganesan Sadhasivam, Rajasekaran Padma, Rajendran Lingeshwaran, Teddu Sivaprasad, Durairaaj Micheal

机构信息

Biotechnology Division, R&D Centre, Orchid Chemicals and Pharmaceuticals Ltd., Chennai, India.

Biotechnology Division, R&D Centre, Orchid Chemicals and Pharmaceuticals Ltd., Chennai, India

出版信息

Appl Environ Microbiol. 2016 Jun 13;82(13):3711-3720. doi: 10.1128/AEM.00174-16. Print 2016 Jul 1.

Abstract

UNLABELLED

Deacetylcephalosporin C synthase (DACS), a 2-oxoglutarate-dependent oxygenase synthesized by Streptomyces clavuligerus, transforms an inert methyl group of deacetoxycephalosporin C (DAOC) into an active hydroxyl group of deacetylcephalosporin C (DAC) during the biosynthesis of cephalosporin. It is a step which is chemically difficult to accomplish, but its development by use of an enzymatic method with DACS can facilitate a cost-effective technology for the manufacture of semisynthetic cephalosporin intermediates such as 7-amino-cephalosporanic acid (7ACA) and hydroxymethyl-7-amino-cephalosporanic acid (HACA) from cephalosporin G. As the native enzyme showed negligible activity toward cephalosporin G, an unnatural and less expensive substrate analogue, directed-evolution strategies such as random, semirational, rational, and computational methods were used for systematic engineering of DACS for improved activity. In comparison to the native enzyme, several variants with improved catalytic efficiency were found. The enzyme was stable for several days and is expressed in soluble form at high levels with significantly higher kcat/Km values. The efficacy and industrial scalability of one of the selected variants, CefFGOS, were demonstrated in a process showing complete bioconversion of 18 g/liter of cephalosporin G into deacetylcephalosporin G (DAG) in about 80 min and showed reproducible results at higher substrate concentrations as well. DAG could be converted completely into HACA in about 30 min by a subsequent reaction, thus facilitating scalability toward commercialization. The experimental findings with several mutants were also used to rationalize the functional conformation deduced from homology modeling, and this led to the disclosure of critical regions involved in the catalysis of DACS.

IMPORTANCE

7ACA and HACA serve as core intermediates for the manufacture of several semisynthetic cephalosporins. As they are expensive, a cost-effective enzyme technology for the manufacture of these intermediates is required. Deacetylcephalosporin C synthase (DACS) was identified as a candidate enzyme for the development of technology from cephalosporin G in this study. Directed-evolution strategies were employed to enhance the catalytic efficiency of deacetylcephalosporin C synthase. One of the selected mutants of deacetylcephalosporin C synthase could convert high concentrations of cephalosporin G into DAG, which subsequently could be converted into HACA completely. As cephalosporin G is inexpensive and readily available, the technology would lead to a substantial reduction in the cost for these intermediates upon commercialization.

摘要

未标记

去乙酰头孢菌素C合酶(DACS)是由棒状链霉菌合成的一种依赖2-氧代戊二酸的加氧酶,在头孢菌素生物合成过程中,它将去乙酰氧头孢菌素C(DAOC)的一个惰性甲基转化为去乙酰头孢菌素C(DAC)的一个活性羟基。这一步骤在化学上很难实现,但利用DACS的酶促方法来开发它,可以促进一种具有成本效益的技术,用于从头孢菌素G制造半合成头孢菌素中间体,如7-氨基头孢烷酸(7ACA)和羟甲基-7-氨基头孢烷酸(HACA)。由于天然酶对头孢菌素G(一种非天然且成本较低的底物类似物)的活性可忽略不计,因此采用了随机、半理性、理性和计算方法等定向进化策略对DACS进行系统工程改造,以提高其活性。与天然酶相比,发现了几种催化效率提高的变体。该酶稳定数天,以可溶性形式高水平表达,其kcat/Km值显著更高。所选变体之一CefFGOS的功效和工业可扩展性在一个过程中得到了证明,该过程显示在约80分钟内可将18克/升的头孢菌素G完全生物转化为去乙酰头孢菌素G(DAG),并且在更高底物浓度下也显示出可重复的结果。通过后续反应,DAG可在约30分钟内完全转化为HACA,从而促进了向商业化的可扩展性。对几个突变体的实验结果也用于合理化从同源建模推导的功能构象,这导致了DACS催化中涉及的关键区域的揭示。

重要性

7ACA和HACA是制造几种半合成头孢菌素的核心中间体。由于它们价格昂贵,因此需要一种具有成本效益的酶技术来制造这些中间体。在本研究中,去乙酰头孢菌素C合酶(DACS)被确定为从头孢菌素G开发技术的候选酶。采用定向进化策略来提高去乙酰头孢菌素C合酶的催化效率。所选的去乙酰头孢菌素C合酶突变体之一可以将高浓度的头孢菌素G转化为DAG,随后DAG可以完全转化为HACA。由于头孢菌素G价格低廉且易于获得,该技术在商业化后将大幅降低这些中间体的成本。

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