与蓖麻毒素酶亚基上第二个中和热点结合的单域抗体的结构分析

Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.

作者信息

Rudolph Michael J, Vance David J, Cassidy Michael S, Rong Yinghui, Mantis Nicholas J

机构信息

From the New York Structural Biology Center, New York, New York 10027,

the Division of Infectious Diseases, Wadsworth Center, New York State Department of Health, Albany, New York 12208, and.

出版信息

J Biol Chem. 2017 Jan 20;292(3):872-883. doi: 10.1074/jbc.M116.758102. Epub 2016 Nov 30.

Abstract

Ricin toxin is a heterodimer consisting of RTA, a ribosome-inactivating protein, and RTB, a lectin that facilitates receptor-mediated uptake into mammalian cells. In previous studies, we demonstrated that toxin-neutralizing antibodies target four spatially distinct hot spots on RTA, which we refer to as epitope clusters I-IV. In this report, we identified and characterized three single domain camelid antibodies (VH) against cluster II. One of these VHs, V5E1, ranks as one of the most potent ricin-neutralizing antibodies described to date. We solved the X-ray crystal structures of each of the three VHs (E1, V1C7, and V5E1) in complex with RTA. V5E1 buries a total of 1,133 Å of surface area on RTA and makes primary contacts with α-helix A (residues 18-32), α-helix F (182-194), as well as the F-G loop. V5E1, by virtue of complementarity determining region 3 (CDR3), may also engage with RTB and potentially interfere with the high affinity galactose-recognition element that plays a critical role in toxin attachment to cell surfaces and intracellular trafficking. The two other VHs, E1 and V1C7, bind epitopes adjacent to V5E1 but display only weak toxin neutralizing activity, thereby providing structural insights into specific residues within cluster II that may be critical contact points for toxin inactivation.

摘要

蓖麻毒素是一种异源二聚体,由核糖体失活蛋白RTA和凝集素RTB组成,RTB有助于受体介导的进入哺乳动物细胞的摄取过程。在先前的研究中,我们证明毒素中和抗体靶向RTA上四个空间上不同的热点,我们将其称为表位簇I-IV。在本报告中,我们鉴定并表征了三种针对簇II的单域骆驼科抗体(VH)。其中一种VH,即V5E1,是迄今为止描述的最有效的蓖麻毒素中和抗体之一。我们解析了三种VH(E1、V1C7和V5E1)与RTA复合物的X射线晶体结构。V5E1在RTA上总共掩埋了1133 Å的表面积,并与α-螺旋A(第18-32位氨基酸残基)、α-螺旋F(182-194)以及F-G环进行主要接触。V5E1凭借互补决定区3(CDR3),也可能与RTB结合,并可能干扰在毒素附着于细胞表面和细胞内运输中起关键作用的高亲和力半乳糖识别元件。另外两种VH,E1和V1C7,结合与V5E1相邻的表位,但仅显示出较弱的毒素中和活性,从而为簇II内可能是毒素失活关键接触点的特定残基提供了结构见解。

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