对巴西利什曼原虫(维安尼亚亚属)10号染色体上编码的利什曼溶素的结构见解。
Structural insights into leishmanolysins encoded on chromosome 10 of Leishmania (Viannia) braziliensis.
作者信息
Sutter Amanda, Antunes Deborah, Silva-Almeida Mariana, Costa Maurício Garcia de Souza, Caffarena Ernesto Raul
机构信息
Grupo de Biofísica Computacional e Modelagem Molecular, Programa de Computação Científica, Rio de Janeiro, RJ, Brasil.
Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Biologia Molecular e Doenças Endêmicas, Rio de Janeiro, RJ, Brasil.
出版信息
Mem Inst Oswaldo Cruz. 2017 Sep;112(9):617-625. doi: 10.1590/0074-02760160522.
BACKGROUND
Leishmanolysins have been described as important parasite virulence factors because of their roles in the infection of promastigotes and resistance to host's defenses. Leishmania (Viannia) braziliensis contains several leishmanolysin genes in its genome, especially in chromosome 10. However, the functional impact of such diversity is not understood, but may be attributed partially to the lack of structural data for proteins from this parasite.
OBJECTIVES
This works aims to compare leishmanolysin sequences from L. (V.) braziliensis and to understand how the diversity impacts in their structural and dynamic features.
METHODS
Leishmanolysin sequences were retrieved from GeneDB. Subsequently, 3D models were built using comparative modeling methods and their dynamical behavior was studied using molecular dynamic simulations.
FINDINGS
We identified three subgroups of leishmanolysins according to sequence variations. These differences directly affect the electrostatic properties of leishmanolysins and the geometry of their active sites. We identified two levels of structural heterogeneity that might be related to the ability of promastigotes to interact with a broad range of substrates.
MAIN CONCLUSION
Altogether, the structural plasticity of leishmanolysins may constitute an important evolutionary adaptation rarely explored when considering the virulence of L. (V.) braziliensis parasites.
背景
利什曼溶素因其在前鞭毛体感染及抵抗宿主防御中的作用,被视为重要的寄生虫毒力因子。巴西利什曼原虫(维氏亚属)基因组中含有多个利什曼溶素基因,尤其是在10号染色体上。然而,这种多样性的功能影响尚不清楚,部分原因可能是缺乏该寄生虫蛋白质的结构数据。
目的
本研究旨在比较巴西利什曼原虫(维氏亚属)的利什曼溶素序列,并了解这种多样性如何影响其结构和动力学特征。
方法
从基因数据库检索利什曼溶素序列。随后,采用比较建模方法构建三维模型,并利用分子动力学模拟研究其动力学行为。
研究结果
根据序列变异,我们鉴定出利什曼溶素的三个亚组。这些差异直接影响利什曼溶素的静电性质及其活性位点的几何形状。我们确定了两个结构异质性水平,这可能与前鞭毛体与多种底物相互作用的能力有关。
主要结论
总体而言,利什曼溶素的结构可塑性可能是一种重要的进化适应性,在考虑巴西利什曼原虫(维氏亚属)寄生虫的毒力时很少被探讨。