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混乱还是清晰?

- Chaos or clarity?

作者信息

Videira S I R, Groenewald J Z, Nakashima C, Braun U, Barreto R W, de Wit P J G M, Crous P W

机构信息

Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands.

Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.

出版信息

Stud Mycol. 2017 Jun;87:257-421. doi: 10.1016/j.simyco.2017.09.003. Epub 2017 Sep 28.

DOI:10.1016/j.simyco.2017.09.003
PMID:29180830
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5693839/
Abstract

The represent thousands of fungal species that are associated with diseases on a wide range of plant hosts. Understanding and stabilising the taxonomy of genera and species of is therefore of the utmost importance given their impact on agriculture, horticulture and forestry. Based on previous molecular studies, several phylogenetic and morphologically distinct genera within the have been delimited. In this study a multigene phylogenetic analysis (LSU, ITS and ) was performed based on 415 isolates representing 297 taxa and incorporating ex-type strains where available. The main aim of this study was to resolve the phylogenetic relationships among the genera currently recognised within the family, and to clarify the position of the cercosporoid fungi among them. Based on these results many well-known genera are shown to be paraphyletic, with several synapomorphic characters that have evolved more than once within the family. As a consequence, several old generic names including , , , and are resurrected, and 32 additional genera are described as new. Based on phylogenetic data 120 genera are now accepted within the family, but many currently accepted cercosporoid genera still remain unresolved pending fresh collections and DNA data. The present study provides a phylogenetic framework for future taxonomic work within the .

摘要

它们代表了数千种与多种植物寄主疾病相关的真菌物种。鉴于它们对农业、园艺和林业的影响,了解并稳定该类真菌属和种的分类学至关重要。基于之前的分子研究,已界定了该类真菌中几个系统发育和形态上不同的属。在本研究中,基于代表297个分类单元的415个分离株进行了多基因系统发育分析(LSU、ITS和[此处原文缺失具体基因名称]),并在可行的情况下纳入了模式菌株。本研究的主要目的是解析该科目前公认的属之间的系统发育关系,并阐明尾孢菌属真菌在其中的位置。基于这些结果,许多知名属被证明是并系的,有几个共衍征在该科内不止一次进化。因此,包括[此处原文缺失具体属名]、[此处原文缺失具体属名]、[此处原文缺失具体属名]、[此处原文缺失具体属名]和[此处原文缺失具体属名]在内的几个旧属名被重新启用,并描述了另外32个新属。基于系统发育数据,该科目前接受120个属,但许多目前公认的尾孢菌属真菌在有待新的采集样本和DNA数据的情况下仍未得到解决。本研究为该类真菌未来的分类学工作提供了一个系统发育框架。

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8
Cercosporoid fungi (Mycosphaerellaceae) 5. Species on dicots (Anacardiaceae to Annonaceae).尾孢菌属真菌(球腔菌科)5. 双子叶植物上的物种(从漆树科到番荔枝科)。
IMA Fungus. 2016 Jun;7(1):161-216. doi: 10.5598/imafungus.2016.07.01.10. Epub 2016 Jun 16.
9
Naming and outline of -2014 including proposals for the protection or suppression of generic names.2014年的命名与概述,包括关于保护或抑制通用名的提议。
Fungal Divers. 2014 Nov;69(1):1-55. doi: 10.1007/s13225-014-0309-2. Epub 2014 Nov 4.
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Cladosporium fulvum Effectors: Weapons in the Arms Race with Tomato.球腔菌效应物:与番茄军备竞赛中的武器
Annu Rev Phytopathol. 2016 Aug 4;54:1-23. doi: 10.1146/annurev-phyto-011516-040249. Epub 2016 May 23.