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吸烟和饮酒通过靶向PTGS2和TNFAIP3影响缺血性中风疾病的进展。

Smoking and drinking influence the advancing of ischemic stroke disease by targeting PTGS2 and TNFAIP3.

作者信息

Miao Zhimin, Guo Meifang, Zhou Suqin, Sun Xuemei, Wang Fang, Lu Haiying, Cui Zhenhong

机构信息

Department of Neurology Two, The People's Hospital of Shouguang, Weifang, Shandong 262700, P.R. China.

Department of Oncology Two, The People's Hospital of Shouguang, Weifang, Shandong 262700, P.R. China.

出版信息

Exp Ther Med. 2018 Jul;16(1):61-66. doi: 10.3892/etm.2018.6138. Epub 2018 May 7.

Abstract

In the present study, we explored the influence of cigarette smoking and alcohol drinking on gene expression level and related functions and pathways on the development of ischemic stroke (IS) disease. The gene expression profile of E-GEOD-22255 was obtained from 20 IS samples (7 patients without smoking or drinking history and 13 patients with smoking or drinking history) and 20 controls (9 normal controls without smoking or drinking history and 11 controls with smoking or drinking history). The correlation degree between gene expression and grouping were measured by significance analysis of microarray (SAM). Smoking or drinking-related DEGs were screened. GO functional and KEGG pathway enrichment analyses were processed. Based on the KEGG database, a pathway relationship network was constructed. DEGs in significant functions and pathways were inserted and regarded as key DEGs. Gene co-expression network was constructed based on the expression value of key genes. In total, 319 IS-related DEGs, which were induced by smoking and drinking, were screened and enriched in various functions and pathways, including inflammatory response, nuclear factor-κB (NF-κB) signaling pathway and influenza A. Pathway relationship network was constructed with 44 nodes and the hub node was the MAPK signaling pathway. After merging, 87 key DEGs were obtained. The gene co-expression network with 43 node edges was constructed and the hub node was prostaglandin-endoperoxide synthase 2. In IS patients, smoking and drinking may induce different expression of many genes, including and . In addition, these genes participated in various pathways, such as inflammatory response.

摘要

在本研究中,我们探讨了吸烟和饮酒对缺血性中风(IS)疾病发生发展过程中基因表达水平及相关功能和通路的影响。从20例IS样本(7例无吸烟或饮酒史患者和13例有吸烟或饮酒史患者)以及20例对照(9例无吸烟或饮酒史的正常对照和11例有吸烟或饮酒史的对照)中获取了E-GEOD-22255的基因表达谱。通过微阵列显著性分析(SAM)测量基因表达与分组之间的相关程度。筛选出与吸烟或饮酒相关的差异表达基因(DEGs)。进行基因本体(GO)功能和京都基因与基因组百科全书(KEGG)通路富集分析。基于KEGG数据库构建通路关系网络。将具有显著功能和通路中的DEGs插入并视为关键DEGs。基于关键基因的表达值构建基因共表达网络。总共筛选出319个由吸烟和饮酒诱导的与IS相关的DEGs,并在各种功能和通路中富集,包括炎症反应、核因子κB(NF-κB)信号通路和甲型流感。构建了具有44个节点的通路关系网络,枢纽节点是丝裂原活化蛋白激酶(MAPK)信号通路。合并后,获得了87个关键DEGs。构建了具有43个节点边的基因共表达网络,枢纽节点是前列腺素内过氧化物合酶2。在IS患者中,吸烟和饮酒可能诱导许多基因的不同表达,包括……和……。此外,这些基因参与了各种通路,如炎症反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c11/6030864/9984827c7b6e/etm-16-01-0061-g00.jpg

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