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生菜叶际真菌群落的分离与分子特征分析

Isolation and Molecular Characterization of the Romaine Lettuce Phylloplane Mycobiome.

作者信息

Haelewaters Danny, Urbina Hector, Brown Samuel, Newerth-Henson Shannon, Aime M Catherine

机构信息

Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, USA.

Division of Plant Industry, Florida Department of Agriculture and Consumer Services, Gainesville, FL 32608, USA.

出版信息

J Fungi (Basel). 2021 Apr 7;7(4):277. doi: 10.3390/jof7040277.

Abstract

Romaine lettuce () is an important staple of American agriculture. Unlike many vegetables, romaine lettuce is typically consumed raw. Phylloplane microbes occur naturally on plant leaves; consumption of uncooked leaves includes consumption of phylloplane microbes. Despite this fact, the microbes that naturally occur on produce such as romaine lettuce are for the most part uncharacterized. In this study, we conducted culture-based studies of the fungal romaine lettuce phylloplane community from organic and conventionally grown samples. In addition to an enumeration of all such microbes, we define and provide a discussion of the genera that form the "core" romaine lettuce mycobiome, which represent 85.5% of all obtained isolates: , , , , , , , , , and . We highlight the need for additional mycological expertise in that 23% of species in these core genera appear to be new to science and resolve some taxonomic issues we encountered during our work with new combinations for and . Finally, our work lays the ground for future studies that seek to understand the effect these communities may have on preventing or facilitating establishment of exogenous microbes, such as food spoilage microbes and plant or human pathogens.

摘要

长叶生菜()是美国农业的重要主食。与许多蔬菜不同,长叶生菜通常生食。叶表微生物自然存在于植物叶片上;食用未煮熟的叶片包括食用叶表微生物。尽管如此,长叶生菜等农产品上自然存在的微生物大多未被鉴定。在本研究中,我们对来自有机种植和传统种植样本的长叶生菜叶表真菌群落进行了基于培养的研究。除了对所有此类微生物进行计数外,我们还定义并讨论了构成“核心”长叶生菜真菌群落的属,这些属占所有分离菌株的85.5%:,,,,,,,,,和。我们强调需要更多的真菌学专业知识,因为这些核心属中23%的物种似乎是科学界新发现的,并解决了我们在工作中遇到的一些分类学问题,为和提出了新的组合。最后,我们的工作为未来的研究奠定了基础,这些研究旨在了解这些群落可能对预防或促进外源微生物(如食品腐败微生物以及植物或人类病原体)的定殖产生的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a13/8067711/d8ff800b00c9/jof-07-00277-g001.jpg

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