全面分析 CDK5 作为食管癌进展的新型生物标志物。
Comprehensive analysis of CDK5 as a novel biomarker for progression in esophageal cancer.
机构信息
Department of Central Laboratory, Affiliated Hospital of Jiangsu University, 438 Jiefang Road, Zhenjiang, 212001, China.
出版信息
Esophagus. 2023 Jul;20(3):502-514. doi: 10.1007/s10388-023-00988-z. Epub 2023 Feb 28.
BACKGROUND
Cyclin-dependent kinase 5 (CDK5) is a member of the cyclin-dependent kinase family, and unlike the rest of the members of the family, its kinase activity is independent of cyclins. Accumulating evidence has shown that CDK5 plays a significant role in the progress of tumorigenesis except in nervous system. In particular, the expression of CDK5 and its function in esophageal cancer (ESCA) remain unknown.
METHODS
With TCGA and GEO databases, CDK5 was analyzed with the expression, predicted value, clinical relationship, functional enrichment, immune cell infiltration and immune molecules in ESCA. In addition, we explored the CDK5 expression with local datasets and the influence of CDK5 on proliferation, migration and invasion behaviors of the esophageal squamous cell carcinoma (ESCC) cells in vitro and in vivo experiments.
RESULTS
CDK5 expression was upregulated in ESCA, and this regulation has been verified in cell lines of ESCC. Further analysis has found that the expression of CDK5 was correlated with race, weight, BMI, histological type and tumor central location in ESCA. KEGG analysis revealed that CDK5 was involved in the progress of cancers, innate immune system and PI3K-Akt signaling pathway. CDK5 was closely related to immune cells and immune molecules in ESCA. Functional experiments confirmed CDK5 was an oncogene in ESCC by in vivo and in vitro models.
CONCLUSIONS
This study shows that CDK5 is a risk factor to promote tumor progression, and Roscovitine could be one of the effective tools in the therapy of ESCA.
背景
细胞周期蛋白依赖性激酶 5(CDK5)是细胞周期蛋白依赖性激酶家族的成员,与该家族的其他成员不同,其激酶活性不依赖于细胞周期蛋白。越来越多的证据表明,CDK5 在肿瘤发生的进展中除了在神经系统中起着重要作用。特别是,CDK5 的表达及其在食管癌(ESCA)中的功能尚不清楚。
方法
通过 TCGA 和 GEO 数据库,用表达、预测值、临床关系、功能富集、免疫细胞浸润和免疫分子分析 ESCA 中的 CDK5。此外,我们还探讨了局部数据集的 CDK5 表达情况以及 CDK5 对体外和体内食管鳞状细胞癌(ESCC)细胞增殖、迁移和侵袭行为的影响。
结果
CDK5 在 ESCA 中表达上调,这一调控在 ESCC 细胞系中得到了验证。进一步分析发现,CDK5 的表达与 ESCA 中的种族、体重、BMI、组织学类型和肿瘤中心位置有关。KEGG 分析表明,CDK5 参与了癌症、固有免疫系统和 PI3K-Akt 信号通路的进展。CDK5 与 ESCA 中的免疫细胞和免疫分子密切相关。功能实验通过体内和体外模型证实 CDK5 是 ESCC 的致癌基因。
结论
本研究表明 CDK5 是促进肿瘤进展的危险因素,而 Roscovitine 可能是 ESCA 治疗的有效工具之一。