一价氮配位体对氮氧自由基化天青蛋白结构与功能的主、次配位球效应。
Primary and Secondary Coordination Sphere Effects on the Structure and Function of -Nitrosylating Azurin.
机构信息
Department of Chemistry, University of Texas at Austin, 105 E 24th St., Austin, Texas 78712, United States.
Department of Chemistry, University of Urbana-Champaign, Champaign, Illinois 61801, United States.
出版信息
J Am Chem Soc. 2023 Sep 20;145(37):20610-20623. doi: 10.1021/jacs.3c07399. Epub 2023 Sep 11.
Much progress has been made in understanding the roles of the secondary coordination sphere (SCS) in tuning redox potentials of metalloproteins. In contrast, the impact of SCS on reactivity is much less understood. A primary example is how copper proteins can promote -nitrosylation (SNO), which is one of the most important dynamic post-translational modifications, and is crucial in regulating nitric oxide storage and transportation. Specifically, the factors that instill Cu with -nitrosylating capabilities and modulate activity are not well understood. To address this issue, we investigated the influence of the primary and secondary coordination sphere on Cu-catalyzed -nitrosylation by developing a series of azurin variants with varying catalytic capabilities. We have employed a multidimensional approach involving electronic absorption, S and Cu K-edge XAS, EPR, and resonance Raman spectroscopies together with QM/MM computational analysis to examine the relationships between structure and molecular mechanism in this reaction. Our findings have revealed that kinetic competency is correlated with three balancing factors, namely Cu-S bond strength, Cu spin localization, and relative S(p) vs S(p) contributions to the ground state. Together, these results support a reaction pathway that proceeds through the attack of the Cu-S bond rather than electrophilic addition to Cu or radical attack of S. The insights gained from this work provide not only a deeper understanding of SNO in biology but also a basis for designing artificial and tunable SNO enzymes to regulate NO and prevent diseases due to SNO dysregulation.
在理解二次配位(SCS)在调节金属蛋白氧化还原电位方面的作用方面已经取得了很大进展。相比之下,SCS 对反应性的影响则了解得较少。一个主要的例子是铜蛋白如何能够促进 - 亚硝基化(SNO),这是最重要的动态翻译后修饰之一,对于调节一氧化氮的储存和运输至关重要。具体来说,赋予 Cu 具有 - 亚硝基化能力并调节其活性的因素尚不清楚。为了解决这个问题,我们通过开发一系列具有不同催化能力的天青蛋白变体,研究了一级和二级配位球对 Cu 催化的 - 亚硝基化的影响。我们采用了一种多维方法,涉及电子吸收、S 和 Cu K 边 XAS、EPR 和共振拉曼光谱以及 QM/MM 计算分析,以检查该反应中结构与分子机制之间的关系。我们的研究结果表明,动力学能力与三个平衡因素相关,即 Cu-S 键强度、Cu 自旋定位和基态中 S(p)对 S(p)的相对贡献。这些结果共同支持了一种反应途径,该途径是通过 Cu-S 键的攻击而不是 Cu 的亲电加成或 S 的自由基攻击进行的。这项工作的结果不仅提供了对生物学中 SNO 的更深入理解,而且为设计人工和可调谐的 SNO 酶以调节 NO 和防止由于 SNO 失调引起的疾病提供了基础。