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印度高药用价值水果中“澳洲植原体”的检测与分子特征分析

Detection and molecular characterization of ' Phytoplasma australasiaticum' in : a fruit of high medicinal values in India.

作者信息

Singh Sushil Kumar, Ranebennur Hemavati, Gupta Shivani, Pandey Himanshu, Singh Vivek, Rao Govind Pratap

机构信息

Department of Plant Pathology, Acharya Narendra Dev University of Agriculture & Technology, Kumarganj, Ayodhya, 224229 Uttar Pradesh India.

Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, 110012 India.

出版信息

3 Biotech. 2024 May;14(5):147. doi: 10.1007/s13205-024-03995-8. Epub 2024 May 3.

Abstract

In surveys conducted from 2020 to 2022, five leaf samples each from symptomatic trees and seedlings, along with five samples from asymptomatic trees and seedlings, were collected in Ayodhya, Uttar Pradesh, India. The DNA extraction from all the samples was subjected to nested PCR assays, using the universal phytoplasma-specific primers set (P1/P7 followed by R16F2n/R16R2). The resulting 1.2 kb amplified products were observed in all the symptomatic samples but not in the asymptomatic samples. Bael phytoplasma strain sequences from the trees and seedlings were found 100% identical within themselves and only two representative sequences (one each from tree and seedling) were deposited in GenBank (NCBI) as PP415872 (AmA-1) and PP415873 (AmA-2). BLASTn searches revealed the maximum (100%) sequence identity with a phytoplasma strain from murraya little leaf strain of Faizabad (GenBank Acc.no. OP984129) and lowest (99.84%) with arecanut crown choking of Shimoga (GenBank Acc. no. OM417502) from Karnataka. Phylogenetic analysis clustered the bael phytoplasma isolates with peanut witches' broom group phytoplasma strains. Virtual RFLP analysis confirmed their identity as '. P. australasiaticum', a 16SrII-D subgroup strain. This study presents the first identification of a phytoplasma strain in , emphasizing its potential threat to fruit crops and the need for vigilance in nursery practices to prevent further dissemination.

摘要

在2020年至2022年进行的调查中,从印度北方邦阿约提亚有症状的树木和幼苗中各采集了5片叶子样本,同时从无症状的树木和幼苗中采集了5个样本。使用通用的植原体特异性引物组(P1/P7,随后是R16F2n/R16R2)对所有样本进行DNA提取,并进行巢式PCR分析。在所有有症状的样本中都观察到了1.2 kb的扩增产物,而在无症状样本中未观察到。从树木和幼苗中分离出的比尔植原体菌株序列彼此之间100%相同,仅将两个代表性序列(一个来自树木,一个来自幼苗)作为PP415872(AmA-1)和PP415873(AmA-2)存入GenBank(NCBI)。BLASTn搜索显示,与来自法扎巴德的番石榴小叶菌株的植原体菌株序列一致性最高(100%),与来自卡纳塔克邦的希莫加槟榔树冠枯萎病的序列一致性最低(99.84%)(GenBank登录号:OM417502)。系统发育分析将比尔植原体分离株与花生丛枝病组植原体菌株聚类在一起。虚拟RFLP分析证实它们属于“澳大利亚植原体”,即16SrII-D亚组菌株。本研究首次鉴定了比尔植原体菌株,并强调了其对水果作物的潜在威胁以及在苗圃作业中保持警惕以防止进一步传播的必要性。

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