蓝光发光二极管促进根尖乳头干细胞成骨/成牙分化过程中 circRNAs 的差异表达
Differential expression of circRNAs during osteogenic/odontogenic differentiation of stem cells from apical papilla promoted by blue light-emitting diode.
机构信息
School of Stomatology, Southwest Medical University, Luzhou, 646000, China.
The Department of Preventive Dentistry, The Affiliated Stomatological Hospital, Southwest Medical University, Luzhou, 646000, China.
出版信息
Mol Biol Rep. 2024 Jun 1;51(1):710. doi: 10.1007/s11033-024-09621-3.
BACKGROUND
Circular RNA (circRNA) is a key player in regulating the multidirectional differentiation of stem cells. Previous research by our group found that the blue light-emitting diode (LED) had a promoting effect on the osteogenic/odontogenic differentiation of human stem cells from apical papilla (SCAPs). This research aimed to investigate the differential expression of circRNAs during the osteogenic/odontogenic differentiation of SCAPs regulated by blue LED.
MATERIALS AND METHODS
SCAPs were divided into the irradiation group (4 J/cm) and the control group (0 J/cm), and cultivated in an osteogenic/odontogenic environment. The differentially expressed circRNAs during osteogenic/odontogenic differentiation of SCAPs promoted by blue LED were detected by high-throughput sequencing, and preliminarily verified by qRT-PCR. Functional prediction of these circRNAs was performed using Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) and the circRNA-miRNA-mRNA networks were also constructed.
RESULTS
It showed 301 circRNAs were differentially expressed. GO and KEGG analyses suggested that these circRNAs were associated with some signaling pathways related to osteogenic/odontogenic differentiation. And the circRNA-miRNA-mRNA networks were also successfully constructed.
CONCLUSION
CircRNAs were involved in the osteogenic/odontogenic differentiation of SCAPs promoted by blue LED. In this biological process, circRNA-miRNA-mRNA networks served an important purpose, and circRNAs regulated this process through certain signaling pathways.
背景
环状 RNA(circRNA)是调节干细胞多向分化的关键因素。本课题组前期研究发现,蓝光二极管(LED)对人根尖乳头干细胞(SCAP)的成骨/成牙向分化具有促进作用。本研究旨在探讨蓝光 LED 调控 SCAP 成骨/成牙向分化过程中 circRNAs 的差异表达。
材料与方法
将 SCAP 分为照射组(4 J/cm)和对照组(0 J/cm),在成骨/成牙向诱导环境中培养。采用高通量测序技术检测蓝光 LED 促进 SCAP 成骨/成牙向分化过程中差异表达的 circRNAs,并通过 qRT-PCR 进行初步验证。采用基因本体论(GO)和京都基因与基因组百科全书(KEGG)对这些 circRNAs 进行功能预测,并构建 circRNA-miRNA-mRNA 网络。
结果
共筛选出 301 个差异表达的 circRNAs。GO 和 KEGG 分析提示,这些 circRNAs 与成骨/成牙向分化相关的某些信号通路有关。并成功构建了 circRNA-miRNA-mRNA 网络。
结论
circRNAs 参与了蓝光 LED 诱导的 SCAP 成骨/成牙向分化过程。在这一生物学过程中,circRNA-miRNA-mRNA 网络发挥了重要作用,circRNAs 通过某些信号通路调节这一过程。