沿海微生物组中自由生活和颗粒相关细菌的季节性和年际变化。
Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome.
机构信息
Department of Marine Biology and Oceanography, Institut de Ciències del Mar (ICM-CSIC), Barcelona, Catalonia, Spain.
Centro Oceanográfico de Málaga, Instituto Español de Oceanografía (IEO-CSIC), Málaga, Spain.
出版信息
Environ Microbiol Rep. 2024 Aug;16(4):e13299. doi: 10.1111/1758-2229.13299.
Marine microbial communities differ genetically, metabolically, and ecologically according to their lifestyle, and they may respond differently to environmental changes. In this study, we investigated the seasonal dynamics of bacterial assemblies in the free-living (FL) and particle-associated (PA) fractions across a span of 6 years in the Blanes Bay Microbial Observatory in the Northwestern Mediterranean. Both lifestyles showed marked seasonality. The trends in alpha diversity were similar, with lower values in spring-summer than in autumn-winter. Samples from both fractions were grouped seasonally and the percentage of community variability explained by the measured environmental variables was comparable (32% in FL and 31% in PA). Canonical analyses showed that biotic interactions were determinants of bacterioplankton dynamics and that their relevance varies depending on lifestyles. Time-decay curves confirmed a high degree of predictability in both fractions. Yet, 'seasonal' Amplicon Sequence Variants (ASVs) (as defined by Lomb Scargle time series analysis) in the PA communities represented 46% of the total relative abundance while these accounted for 30% in the FL fraction. These results demonstrate that bacteria inhabiting both fractions exhibit marked seasonality, highlighting the importance of accounting for both lifestyles to fully comprehend the dynamics of marine prokaryotic communities.
海洋微生物群落根据其生活方式在遗传、代谢和生态上存在差异,它们可能对环境变化有不同的反应。在这项研究中,我们调查了西北地中海布兰卡湾微生物观测站 6 年来自由生活 (FL) 和颗粒相关 (PA) 两个群体的细菌组合的季节性动态。两种生活方式都表现出明显的季节性。α多样性的趋势相似,春季-夏季的值低于秋季-冬季。来自两个群体的样本按季节分组,由测量的环境变量解释的群落变异性百分比相当(FL 为 32%,PA 为 31%)。典范分析表明,生物相互作用是浮游细菌动态的决定因素,其相关性取决于生活方式。时间衰减曲线证实了两个群体都具有高度的可预测性。然而,PA 群落中的“季节性”扩增子序列变异 (ASV)(通过 Lomb Scargle 时间序列分析定义)占总相对丰度的 46%,而在 FL 群体中,这些占 30%。这些结果表明,栖息在两个群体中的细菌都表现出明显的季节性,这突出表明,为了充分了解海洋原核群落的动态,必须考虑到这两种生活方式。