噬菌体 Gekk3-15 的分离和全基因组序列
Isolation and complete genome sequence of bacteriophage Gekk3-15.
机构信息
Winogradsky Institute of Microbiology, Research Center "Fundamentals of Biotechnology" RAS, Moscow, Russian Federation.
Genetics and Genome Biology, University of Leicester, Leicester, UK.
出版信息
F1000Res. 2024 Apr 24;13:380. doi: 10.12688/f1000research.144007.1. eCollection 2024.
Bacteria of the genus , especially and are recognized as important fish pathogens that cause significant economic losses in aquaculture. Environmentally friendly bacteriophage-based solutions for the treatment of fish and for the reduction of colonization by pathogenic bacteria in production facilities are currently in high demand. The bacteriophage Gekk3-15 was isolated during a search for novel phage strains potentially suitable for biocontrol applications. Genome sequencing revealed that this virus is a relatively small myovirus with a 64847 bp long dsDNA genome, which is consistent with virion electron microscopy data. Bacteriophage Gekk3-15 is distinct in its nucleotide and encoded aa sequences from all other sequenced bacteriophage genomes, and may represent a new viral taxon at the genus or subfamily level.
属中的细菌,特别是 和 ,被认为是重要的鱼类病原体,在水产养殖中造成了重大的经济损失。目前,人们非常需要基于噬菌体的环保型解决方案来治疗鱼类疾病和减少生产设施中致病性细菌的定植。噬菌体 Gekk3-15 是在寻找可能适用于生物防治应用的新型噬菌体菌株的过程中分离出来的。基因组测序表明,该病毒是一种相对较小的肌尾噬菌体,具有 64847bp 长的 dsDNA 基因组,与病毒粒子电子显微镜数据一致。噬菌体 Gekk3-15 在核苷酸和编码 aa 序列上与所有其他测序的噬菌体基因组都不同,可能代表了属或亚科水平上的一个新的病毒分类群。