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通过核磁共振解析人受磷蛋白1-36个氨基酸的氨基末端片段结构及受磷蛋白五聚体建模

Structure of the 1-36 amino-terminal fragment of human phospholamban by nuclear magnetic resonance and modeling of the phospholamban pentamer.

作者信息

Pollesello P, Annila A, Ovaska M

机构信息

Orion Corporation, Orion Pharma, Department of Pharmacology and Drug Discovery, Cardiovascular Research, FIN-02101 Espoo, Finland.

出版信息

Biophys J. 1999 Apr;76(4):1784-95. doi: 10.1016/S0006-3495(99)77339-X.

Abstract

The structure of a 36-amino-acid-long amino-terminal fragment of phospholamban (phospholamban[1-36]) in aqueous solution containing 30% trifluoroethanol was determined by nuclear magnetic resonance. The peptide, which comprises the cytoplasmic domain and six residues of the transmembrane domain of phospholamban, assumes a conformation characterized by two alpha-helices connected by a turn. The residues of the turn are Ile18, Glu19, Met20, and Pro21, which are adjacent to the two phosphorylation sites Ser16 and Thr17. The proline is in a trans conformation. The helix comprising amino acids 22-36 is well determined (the root mean square deviation for the backbone atoms, calculated for a family of 18 nuclear magnetic resonance structures is 0.57 A). Recently, two molecular models of the transmembrane domain of phospholamban were proposed in which a symmetric homopentamer is composed of a left-handed coiled coil of alpha-helices. The two models differ by the relative orientation of the helices. The model proposed by,Simmerman et al. (H.K. Simmerman, Y.M. Kobayashi, J.M. Autry, and L.R. Jones, 1996, J. Biol. Chem. 271:5941-5946), in which the coiled coil is stabilized by a leucine-isoleucine zipper, is similar to the transmembrane pentamer structure of the cartilage oligomeric membrane protein determined recently by x-ray (V. Malashkevich, R. Kammerer, V Efimov, T. Schulthess, and J. Engel, 1996, Science 274:761-765). In the model proposed by Adams et al. (P.D. Adams, I.T. Arkin, D.M. Engelman, and A.T. Brunger, 1995, Nature Struct. Biol. 2:154-162), the helices in the coiled coil have a different relative orientation, i.e., are rotated clockwise by approximately 50 degrees. It was possible to overlap and connect the structure of phospholamban[1-36] derived in the present study to the two transmembrane pentamer models proposed. In this way two models of the whole phospholamban in its pentameric form were generated. When our structure was connected to the leucine-isoleucine zipper model, the inner side of the cytoplasmic domain of the pentamer (where the helices face one another) was lined by polar residues (Gln23, Gln26, and Asn30), whereas the five Arg25 side chains were on the outer side. On the contrary, when our structure was connected to the other transmembrane model, in the inner side of the cytoplasmic domain of the pentamer, the five Arg25 residues formed a highly charged cluster.

摘要

通过核磁共振确定了在含有30%三氟乙醇的水溶液中,受磷蛋白(磷蛋白[1 - 36])36个氨基酸长的氨基末端片段的结构。该肽包含磷蛋白的细胞质结构域和跨膜结构域的六个残基,呈现出一种由一个转角连接的两个α螺旋为特征的构象。转角的残基是Ile18、Glu19、Met20和Pro21,它们与两个磷酸化位点Ser16和Thr17相邻。脯氨酸处于反式构象。包含氨基酸22 - 36的螺旋结构确定得很好(对于18个核磁共振结构的家族,主链原子的均方根偏差计算为0.57 Å)。最近,有人提出了磷蛋白跨膜结构域的两个分子模型,其中对称的同五聚体由左手α螺旋卷曲螺旋组成。这两个模型的螺旋相对取向不同。Simmerman等人(H.K. Simmerman、Y.M. Kobayashi、J.M. Autry和L.R. Jones,1996,《生物化学杂志》271:5941 - 5946)提出的模型中,卷曲螺旋由亮氨酸 - 异亮氨酸拉链稳定,与最近通过X射线确定的软骨寡聚膜蛋白的跨膜五聚体结构相似(V. Malashkevich、R. Kammerer、V Efimov、T. Schulthess和J. Engel,1996,《科学》274:761 - 765)。在Adams等人(P.D. Adams、I.T. Arkin、D.M. Engelman和A.T. Brunger,1995,《自然结构生物学》2:154 - 162)提出的模型中,卷曲螺旋中的螺旋具有不同的相对取向,即顺时针旋转约50度。可以将本研究中得到的磷蛋白[1 - 36]的结构与提出的两个跨膜五聚体模型重叠并连接起来。通过这种方式生成了五聚体形式的整个磷蛋白的两个模型。当我们的结构与亮氨酸 - 异亮氨酸拉链模型连接时,五聚体细胞质结构域的内侧(螺旋彼此相对的地方)由极性残基(Gln23、Gln26和Asn30)排列,而五个Arg25侧链在外侧。相反,当我们的结构与另一个跨膜模型连接时,在五聚体细胞质结构域的内侧,五个Arg25残基形成了一个高电荷簇。

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