Uratani Y, Kobayashi M, Yokoyama Y, Maeda T, Mitaku S, Hoshino T
Mitsubishi Kasei Institute of Life Sciences, Minamiooya, Machida, Tokyo, Japan.
Biochim Biophys Acta. 1999 Nov 16;1435(1-2):71-83. doi: 10.1016/s0167-4838(99)00194-6.
For functional reconstitution of bacterial cotransporters (carriers or permeases) including the sodium-coupled branched-chain amino acid carrier (LIV-II carrier) of Pseudomonas aeruginosa, the presence of phospholipid is required through the process of solubilization and purification of the transporters from the bacterial membranes, suggesting the possibility that phospholipid may stabilize the structure of the cotransporter proteins to be in a functional form. In this study, this possibility was examined by studying the effect of denaturant on the secondary structure of the LIV-II carrier purified in the absence and presence of phospholipid using circular dichroism (CD) spectroscopy. CD spectra of the purified LIV-II carrier solubilized in n-octyl-beta-D-glucopyranoside (OG), OG/dioleoylphosphatidylethanolamine (DOPE)/dioleoylphosphatidylglycerol (DOPG) mixture, and dispersed into DOPE/DOPG small unilamellar vesicles were measured in the absence of denaturant. The three spectra were very similar and had a trough at 222 nm with mean residue molar ellipticity of -23000 deg.cm(2)/dmol and a shoulder at 208 nm. CD spectral analyses with three different methods (S.W. Provencher, J. Glöckner, Estimation of globular protein secondary structure from circular dichroism, Biochemistry 20 (1981) 33-37; J.Y. Yang, C.-S.C. Wu, H.Z. Martinez, Calculation of protein conformation from circular dichroism, Methods Enzymol. 130 (1986) 208-269; N. Sreerama, R.W. Woody, A self-consistent method for the analysis of protein secondary structure from circular dichroism, Anal. Biochem. 209 (1993) 32-44) revealed that the LIV-II carrier solubilized in OG/DOPE/DOPG mixture contained 69-75% alpha-helix and 0-9% beta-sheet. Addition of 6 M guanidine hydrochloride decreased 48% of the amplitude at 222 nm of the CD spectrum of the carrier solubilized in OG alone and 9-14% of the CD amplitude of the carrier solubilized in OG/DOPE/DOPG or OG/dioleoylphosphatidylcholine mixture and dispersed in liposomes composed of DOPE/DOPG. These results show that the ordered secondary structure of the LIV-II carrier is partially unfolded in OG without phospholipid by denaturant but is greatly stabilized with phospholipids with oleoyl chains independently of their polar head group composition and suggest that the alpha-helical structure of the carrier is mainly embedded in the lipid environment.
为实现细菌共转运蛋白(载体或通透酶)的功能重建,包括铜绿假单胞菌的钠偶联支链氨基酸载体(LIV-II载体),在从细菌膜中溶解和纯化转运蛋白的过程中需要磷脂的存在,这表明磷脂可能将共转运蛋白的结构稳定为功能形式。在本研究中,通过使用圆二色性(CD)光谱研究变性剂对在不存在和存在磷脂的情况下纯化的LIV-II载体二级结构的影响,来检验这种可能性。在不存在变性剂的情况下,测量溶解在正辛基-β-D-吡喃葡萄糖苷(OG)、OG/二油酰磷脂酰乙醇胺(DOPE)/二油酰磷脂酰甘油(DOPG)混合物中并分散到DOPE/DOPG小单层囊泡中的纯化LIV-II载体的CD光谱。这三种光谱非常相似,在222nm处有一个低谷,平均残基摩尔椭圆率为-23000度·厘米²/摩尔,在208nm处有一个肩峰。用三种不同方法进行的CD光谱分析(S.W.普罗文彻、J.格洛克纳,从圆二色性估计球状蛋白质二级结构,《生物化学》20(1981)33-37;J.Y.杨、C.-S.C.吴、H.Z.马丁内斯,从圆二色性计算蛋白质构象,《酶学方法》130(1986)208-269;N.斯里拉马、R.W.伍迪姆,一种从圆二色性分析蛋白质二级结构的自洽方法,《分析生物化学》209(1993)32-44)表明,溶解在OG/DOPE/DOPG混合物中的LIV-II载体含有69-75%的α-螺旋和0-9%的β-折叠。添加6M盐酸胍会使单独溶解在OG中的载体的CD光谱在222nm处的振幅降低48%,使溶解在OG/DOPE/DOPG或OG/二油酰磷脂酰胆碱混合物中并分散在由DOPE/DOPG组成的脂质体中的载体的CD振幅降低9-14%。这些结果表明,LIV-II载体的有序二级结构在没有磷脂的OG中会被变性剂部分展开,但在含有油酰链的磷脂中会得到极大稳定,这与它们的极性头部基团组成无关,并表明载体的α-螺旋结构主要嵌入脂质环境中。