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通过同核和异核核磁共振光谱法解析小鼠[Cd7]-金属硫蛋白-1的三维溶液结构

Three-dimensional solution structure of mouse [Cd7]-metallothionein-1 by homonuclear and heteronuclear NMR spectroscopy.

作者信息

Zangger K, Oz G, Otvos J D, Armitage I M

机构信息

Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis 55455, USA.

出版信息

Protein Sci. 1999 Dec;8(12):2630-8. doi: 10.1110/ps.8.12.2630.

DOI:10.1110/ps.8.12.2630
PMID:10631978
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2144227/
Abstract

Sequential 1H-NMR assignments of mouse [Cd7]-metallothionein-1 (MT1) have been carried out by standard homonuclear NMR methods and the use of an accordion-heteronuclear multiple quantum correlation (HMQC) experiment for establishing the metal, 113Cd2+, to cysteine connectivities. The three-dimensional structure was then calculated using the distance constraints from two-dimensional nuclear Overhauser effect (NOE) spectroscopy spectra and the Cys-Cd connectivities as input for a distance geometry-dynamical simulated annealing protocol in X-PLOR 3.851. Similar to the mammalian MT2 isoforms, the homologous primary structure of MT1 suggested two separate domains, each containing one metal cluster. Because there were no interdomain constraints, the structure calculation for the N-terminal beta- and the C-terminal alpha-domain were carried out separately. The structures are based on 409 NMR constraints, consisting of 381 NOEs and 28 cysteine-metal connectivities. The only elements of regular secondary structure found were two short stretches of 3(10) helices along with some half-turns in the alpha-domain. Structural comparison with rat liver MT2 showed high similarity, with the beta-domain structure in mouse MT1 showing evidence of increased flexibility compared to the same domain in MT2. The latter was reflected by the presence of fewer interresidue NOEs, no slowly exchanging backbone amide protons, and enhanced cadmium-cadmium exchange rates found in the beta-domain of MT1.

摘要

已通过标准的同核核磁共振方法以及使用手风琴式异核多量子相关(HMQC)实验对小鼠[Cd7]-金属硫蛋白-1(MT1)进行了连续的1H-NMR归属,以确定金属113Cd2+与半胱氨酸的连接性。然后使用二维核Overhauser效应(NOE)光谱的距离约束以及Cys-Cd连接性作为X-PLOR 3.851中距离几何-动力学模拟退火协议的输入,计算三维结构。与哺乳动物MT2亚型类似,MT1的同源一级结构表明有两个独立的结构域,每个结构域包含一个金属簇。由于没有结构域间的约束,因此分别对N端β结构域和C端α结构域进行结构计算。这些结构基于409个NMR约束,包括381个NOE和28个半胱氨酸-金属连接性。发现的唯一规则二级结构元素是α结构域中两段短的3(10)螺旋以及一些半圈。与大鼠肝脏MT2的结构比较显示出高度相似性,与MT2中的相同结构域相比,小鼠MT1中的β结构域结构显示出更大的灵活性。这一点体现在MT1的β结构域中残基间NOE较少、没有缓慢交换的主链酰胺质子以及镉-镉交换速率增加。

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