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半乳糖凝集素-4亚家族的特征序列。

Signature sequences for the galectin-4 subfamily.

作者信息

Jiang W, Puch S, Guo X, Bhavanandan V P

机构信息

Department of Biochemistry and Molecular Biology, Pennsylvania State University College of Medicine, Hershey 17033, USA.

出版信息

IUBMB Life. 1999 Dec;48(6):601-5. doi: 10.1080/713803575.

Abstract

Galectins are a distinct family of animal lectins that have a cation-independent affinity for beta-galactoside sugars and share characteristic amino acid sequences. The cDNA encoding rabbit bladder galectin-4 has been cloned and sequenced (GenBank accession no. AF091738). The deduced 328 amino acid sequence predicts a multidomain structure consisting of an N-terminal peptide (19 residues) and two carbohydrate recognition domains (130 residues each) connected by a linker region (49 residues). Comparison of rabbit galectin-4 with related proteins reveals that two peptide motifs, M-A-F/Y-V-P-A-P-G-Y-Q-P-T-Y-N-P-T-L-P-Y in the N terminus and A-F-H-F-N-P-R-F-D-G-W-D-K-V-V-F in the first carbohydrate recognition domain are highly conserved in human, pig, rat, and mouse galectin-4 as well as in mouse galectin-6. The two peptide motifs are proposed here as the signature sequences to identify new members of the galectin-4 subfamily.

摘要

半乳糖凝集素是一类独特的动物凝集素家族,它们对β-半乳糖苷糖具有不依赖阳离子的亲和力,并具有特征性的氨基酸序列。编码兔膀胱半乳糖凝集素-4的cDNA已被克隆和测序(GenBank登录号:AF091738)。推导的328个氨基酸序列预测其为多结构域结构,由一个N端肽(19个残基)和两个碳水化合物识别结构域(各130个残基)组成,中间由一个连接区(49个残基)相连。兔半乳糖凝集素-4与相关蛋白的比较显示,N端的两个肽基序M-A-F/Y-V-P-A-P-G-Y-Q-P-T-Y-N-P-T-L-P-Y和第一个碳水化合物识别结构域中的A-F-H-F-N-P-R-F-D-G-W-D-K-V-V-F在人、猪、大鼠和小鼠的半乳糖凝集素-4以及小鼠的半乳糖凝集素-6中高度保守。本文提出这两个肽基序作为识别半乳糖凝集素-4亚家族新成员的特征序列。

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