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近期媒介蚊虫致倦库蚊中微型反向重复转座元件的扩增:Mimo家族的特征分析

Recent amplification of miniature inverted-repeat transposable elements in the vector mosquito Culex pipiens: characterization of the Mimo family.

作者信息

Feschotte C, Mouchès C

机构信息

Laboratoire Ecologie Moléculaire and Faculté Sciences et Techniques Côte-Basque, Université de Pau et des Pays de l'Adour, Pau, France.

出版信息

Gene. 2000 May 30;250(1-2):109-16. doi: 10.1016/s0378-1119(00)00187-6.

Abstract

We describe a new family of repetitive elements, named Mimo, from the mosquito Culex pipiens. Structural characteristics of these elements fit well with those of miniature inverted-repeat transposable elements (MITEs), which are ubiquitous and highly abundant in plant genomes. The occurrence of Mimo in C. pipiens provides new evidence that MITEs are not restricted to plant genomes, but may be widespread in arthropods as well. The copy number of Mimo elements in C. pipiens ( approximately 1000 copies in a 540Mb genome) supports the hypothesis that there is a positive correlation between genome size and the magnitude of MITE proliferation. In contrast to most MITE families described so far, members of the Mimo family share a high sequence conservation, which may reflect a recent amplification history in this species. In addition, we found that Mimo elements are a frequent nest for other MITE-like elements, suggesting that multiple and successive MITE transposition events have occurred very recently in the C. pipiens genome. Despite evidence for recent mobility of these MITEs, no element has been found to encode a protein; therefore, we do not know how they have transposed and have spread in the genome. However, some sequence similarities in terminal inverted-repeats suggest a possible filiation of some of these mosquito MITEs with pogo-like DNA transposons.

摘要

我们描述了一个来自致倦库蚊的新的重复元件家族,名为Mimo。这些元件的结构特征与微型反向重复转座元件(MITEs)非常契合,MITEs在植物基因组中普遍存在且数量众多。Mimo在致倦库蚊中的出现提供了新的证据,表明MITEs不仅限于植物基因组,也可能广泛存在于节肢动物中。致倦库蚊中Mimo元件的拷贝数(在540Mb的基因组中约有1000个拷贝)支持了基因组大小与MITE增殖规模之间存在正相关的假设。与目前描述的大多数MITE家族不同,Mimo家族的成员具有高度的序列保守性,这可能反映了该物种近期的扩增历史。此外,我们发现Mimo元件经常是其他类MITE元件的嵌套位点,这表明在致倦库蚊基因组中最近发生了多次连续的MITE转座事件。尽管有证据表明这些MITEs近期具有移动性,但尚未发现任何元件编码蛋白质;因此,我们不知道它们是如何转座并在基因组中传播的。然而,末端反向重复序列中的一些序列相似性表明,这些蚊子的一些MITEs可能与类pogo DNA转座子存在亲缘关系。

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