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RNA 结合蛋白 TIA-1 是一种新型的哺乳动物剪接调节因子,它通过与 5' 剪接位点相邻的内含子序列发挥作用。

The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site.

作者信息

Del Gatto-Konczak F, Bourgeois C F, Le Guiner C, Kister L, Gesnel M C, Stévenin J, Breathnach R

机构信息

INSERM U463, Institut de Biologie-CHR, 44093 Nantes Cedex 1, France.

出版信息

Mol Cell Biol. 2000 Sep;20(17):6287-99. doi: 10.1128/MCB.20.17.6287-6299.2000.

Abstract

Splicing of the K-SAM alternative exon of the fibroblast growth factor receptor 2 gene is heavily dependent on the U-rich sequence IAS1 lying immediately downstream from its 5' splice site. We show that IAS1 can activate the use of several heterologous 5' splice sites in vitro. Addition of the RNA-binding protein TIA-1 to splicing extracts preferentially enhances the use of 5' splice sites linked to IAS1. TIA-1 can provoke a switch to use of such sites on pre-mRNAs with competing 5' splice sites, only one of which is adjacent to IAS1. Using a combination of UV cross-linking and specific immunoprecipitation steps, we show that TIA-1 binds to IAS1 in cell extracts. This binding is stronger if IAS1 is adjacent to a 5' splice site and is U1 snRNP dependent. Overexpression of TIA-1 in cultured cells activates K-SAM exon splicing in an IAS1-dependent manner. If IAS1 is replaced with a bacteriophage MS2 operator, splicing of the K-SAM exon can no longer be activated by TIA-1. Splicing can, however, be activated by a TIA-1-MS2 coat protein fusion, provided that the operator is close to the 5' splice site. Our results identify TIA-1 as a novel splicing regulator, which acts by binding to intron sequences immediately downstream from a 5' splice site in a U1 snRNP-dependent fashion. TIA-1 is distantly related to the yeast U1 snRNP protein Nam8p, and the functional similarities between the two proteins are discussed.

摘要

成纤维细胞生长因子受体2基因的K-SAM可变外显子的剪接严重依赖于位于其5'剪接位点下游紧邻的富含U的序列IAS1。我们发现,IAS1在体外能够激活多个异源5'剪接位点的使用。向剪接提取物中添加RNA结合蛋白TIA-1优先增强与IAS1相连的5'剪接位点的使用。TIA-1能够促使在具有竞争性5'剪接位点的前体mRNA上转而使用此类位点,其中只有一个与IAS1相邻。通过结合紫外线交联和特异性免疫沉淀步骤,我们发现TIA-1在细胞提取物中与IAS1结合。如果IAS1与5'剪接位点相邻且依赖于U1 snRNP,这种结合会更强。在培养细胞中过表达TIA-1以IAS1依赖的方式激活K-SAM外显子剪接。如果将IAS1替换为噬菌体MS2操纵子,K-SAM外显子的剪接就不能再被TIA-1激活。然而,如果操纵子靠近5'剪接位点,剪接可以被TIA-1-MS2外壳蛋白融合体激活。我们的结果确定TIA-1是一种新型剪接调节因子,它通过以U1 snRNP依赖的方式结合到5'剪接位点下游紧邻的内含子序列发挥作用。TIA-1与酵母U' snRNP蛋白Nam8p有较远的亲缘关系,并讨论了这两种蛋白之间的功能相似性。

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本文引用的文献

4
Luc7p, a novel yeast U1 snRNP protein with a role in 5' splice site recognition.
Genes Dev. 1999 Sep 15;13(18):2425-38. doi: 10.1101/gad.13.18.2425.
5
Genetic and physical interactions involving the yeast nuclear cap-binding complex.
Mol Cell Biol. 1999 Oct;19(10):6543-53. doi: 10.1128/MCB.19.10.6543.
6
Combinatorial control of a neuron-specific exon.
RNA. 1999 May;5(5):687-706. doi: 10.1017/s1355838299990155.
8
Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex.
Genes Dev. 1999 Mar 1;13(5):581-92. doi: 10.1101/gad.13.5.581.
10
Alternative splicing and programmed cell death.
Proc Soc Exp Biol Med. 1999 Feb;220(2):64-72. doi: 10.1046/j.1525-1373.1999.d01-11.x.

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