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限制性片段长度多态性(RFLP)条带大小标准:1991年至1997年能力验证研究中的细胞系K562值

RFLP band size standards: cell line K562 values from 1991 to 1997 proficiency studies.

作者信息

Duewer D L, Gary K T, Reeder D J

机构信息

Analytical Chemistry Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA.

出版信息

J Forensic Sci. 2000 Sep;45(5):1106-18.

Abstract

Cell line K562 is the defacto forensic control material for forensic restriction fragment length polymorphism (RFLP) DNA profiling in the U.S. Fifty-one proficiency tests conducted from 1991 through 1997 enable a detailed description of RFLP measurement performance during this period. Sufficient data are available to define reference distributions for all commonly utilized and many less commonly reported genetic loci, for both HaeIII- and HinfI-based RFLP systems. The average measured size of HaeIII locus D1S7 and D5S110 bands has varied slightly over time; while relatively small, these temporal changes add to the overall interlaboratory measurement uncertainty. The characteristic standard deviation for HinfI RFLP system measurements has a nearly identical dependence on expected band size as does the standard deviation for HaeIII measurements. The ellipsoidal distance, K, is suggested for use as an RFLP data quality metric; the critical threshold value that on average excludes 1% of plausibly valid proficiency data for a given polymorphic locus is K1% = 14.2.

摘要

细胞系K562是美国法医限制性片段长度多态性(RFLP)DNA分析事实上的法医对照材料。1991年至1997年期间进行的51次能力验证,对这一时期RFLP测量性能进行了详细描述。现有足够的数据来定义基于HaeIII和HinfI的RFLP系统中所有常用以及许多较少报告的基因座的参考分布。随着时间的推移,HaeIII基因座D1S7和D5S110条带的平均测量大小略有变化;虽然变化相对较小,但这些时间变化增加了实验室间测量的总体不确定性。HinfI RFLP系统测量的特征标准差与HaeIII测量的标准差对预期条带大小的依赖性几乎相同。建议使用椭圆距离K作为RFLP数据质量指标;对于给定的多态性基因座,平均排除1%合理有效的能力验证数据的临界阈值为K1% = 14.2。

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