Stroppolo M E, Pesce A, Falconi M, O'Neill P, Bolognesi M, Desideri A
INFM, Dipartimento di Biologie, Universita di Roma, Tor Vergata, Via della Ricerca Scientifica snc, 00133 Rome, Italy.
FEBS Lett. 2000 Oct 13;483(1):17-20. doi: 10.1016/s0014-5793(00)01967-0.
The Val28-->Gly single mutant at the subunit interface of Cu,Zn superoxide dismutase from Photobacterium leiognathi displays a k(cat)/K(M) value of 1.7x10(10) M(-1) s(-1), twice that of the native enzyme. Analysis of the three-dimensional structure indicates that the active site Cu,Zn center is not perturbed, slight structural deviations being only localized in proximity of the mutation site. The enzyme-substrate association rate, calculated by Brownian dynamics simulation, is identical for both enzymes, indicating that the higher catalytic efficiency of the Val28-->Gly mutant is not due to a more favorable electrostatic potential distribution. This result demonstrates the occurrence of an intramolecular communication between the mutation site and the catalytic center, about 18 A away and indicates a new strategy to encode extra efficiency within other members of this enzymatic family.