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侧链带有烷基氨基的连接酶核酶的体外筛选。

In vitro selection of a ligase ribozyme carrying alkylamino groups in the side chains.

作者信息

Teramoto N, Imanishi Y, Ito Y

机构信息

Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Kyoto, 606-8501, Japan.

出版信息

Bioconjug Chem. 2000 Nov-Dec;11(6):744-8. doi: 10.1021/bc990146r.

DOI:10.1021/bc990146r
PMID:11087320
Abstract

A novel ligase ribozyme was in vitro selected from a random-sequence RNA library including N(6)-aminohexyl-modified adenine residues in place of natural adenine residues. This ribozyme mediated the formation of a phosphodiester bond with a DNA oligonucleotide through condensation with a 5'-triphosphate moiety on the ribozyme. Among the clones isolated from this selection, one was shown to accelerate ligation about 250-fold compared to the original random-sequence RNA library. Almost no rate acceleration was observed when the N(6)-aminohexyl-groups on adenine residues were omitted. Furthermore, ligation was dependent on the presence of a template DNA oligonucleotide that bridged the two strands.

摘要

一种新型连接酶核酶是从一个随机序列RNA文库中体外筛选出来的,该文库中用N(6)-氨基己基修饰的腺嘌呤残基取代了天然腺嘌呤残基。这种核酶通过与核酶上的5'-三磷酸部分缩合,介导了与DNA寡核苷酸形成磷酸二酯键。从该筛选中分离出的克隆中,有一个与原始随机序列RNA文库相比,连接速度加快了约250倍。当腺嘌呤残基上的N(6)-氨基己基基团被省略时,几乎没有观察到速度加快。此外,连接依赖于连接两条链的模板DNA寡核苷酸的存在。

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引用本文的文献

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In vitro selection using modified or unnatural nucleotides.使用修饰的或非天然核苷酸进行体外筛选。
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