Nieslanik B S, Ibarra C, Atkins W M
Department of Medicinal Chemistry, Box 357610, University of Washington, Seattle 98195, USA.
Biochemistry. 2001 Mar 27;40(12):3536-43. doi: 10.1021/bi001869x.
Binding of a hydrophobic glutathione product conjugate to rGST A1-1 proceeds via a two-step mechanism, including rapid ligand docking, followed by a slow isomerization to the final [GST.ligand] complex, which involves the localization of the flexible C-terminal helix. These kinetically resolved steps have been observed previously by stopped-flow fluorescence with the wild-type rGST A1-1, which contains a native Trp-21 approximately 20 A from the ligand binding site at the intrasubunit domain-domain interface. To confirm this binding mechanism, as well as elucidate the effects of truncation of the C-terminus, we have further characterized the binding and dissociation of the glutathione-ethacrynic acid product conjugate (GS-EA) to wild-type, F222W:W21F, and Delta209-222 rGST A1-1 and wild-type hGST A1-1. Although modest kinetic differences were observed between the hGST A1-1 and rGST A1-1, stopped-flow binding studies with GS-EA verified that the two-step mechanism of ligand binding is not unique to the GST A1-1 isoform from rat. An F222W:W21F rGST A1-1 double mutant provides a direct fluorescence probe of changes in the environment of the C-terminal residue. The observation of two relaxation times during ligand binding and dissociation to F222W:W21F suggests that the C-terminus has an intermediate conformation following ligand docking, which is distinct from its conformation in the apoenzyme or localized helical state. For the wild-type, Delta209-222, and F222W:W21F proteins, variable-temperature stopped-flow experiments were performed and activation parameters calculated for the individual steps of the binding reaction. Activation parameters for the binding reaction coordinate illustrate that the C-terminus provides a significant entropic contribution to ligand binding, which is completely realized within the initial docking step of the binding mechanism. In contrast, the slow isomerization step is enthalpically driven. The partitioning of entropic and enthalpic components of binding energy was confirmed by isothermal titration calorimetry with wild-type and Delta209-222 rGST A1-1.
疏水性谷胱甘肽产物共轭物与rGST A1-1的结合通过两步机制进行,包括快速的配体对接,随后是缓慢的异构化形成最终的[GST-配体]复合物,这涉及到柔性C末端螺旋的定位。这些动力学分辨步骤先前已通过野生型rGST A1-1的停流荧光观察到,野生型rGST A1-1在亚基内结构域-结构域界面处含有一个距配体结合位点约20 Å的天然色氨酸Trp-21。为了证实这种结合机制,并阐明C末端截短的影响,我们进一步表征了谷胱甘肽-依他尼酸产物共轭物(GS-EA)与野生型、F222W:W21F和Δ209-222 rGST A1-1以及野生型hGST A1-1的结合和解离。尽管在hGST A1-1和rGST A1-1之间观察到适度的动力学差异,但用GS-EA进行的停流结合研究证实,配体结合的两步机制并非大鼠GST A1-1同工型所特有。F222W:W21F rGST A1-1双突变体提供了一个直接的荧光探针,用于检测C末端残基环境的变化。在配体与F222W:W21F结合和解离过程中观察到两个弛豫时间,这表明C末端在配体对接后具有中间构象,这与其在脱辅酶或局部螺旋状态下的构象不同。对于野生型、Δ209-222和F222W:W21F蛋白进行了变温停流实验,并计算了结合反应各个步骤的活化参数。结合反应坐标的活化参数表明,C末端为配体结合提供了显著的熵贡献,这在结合机制的初始对接步骤中完全实现。相比之下,缓慢的异构化步骤是由焓驱动的。通过对野生型和Δ209-22,rGST A1-1进行等温滴定量热法,证实了结合能的熵和焓成分的分配情况。