Hyun C G, Kim S S, Lee I H, Suh J W
Department of Biological Science, Institute of Bioscience and Biotechnology, Myong Ji University, Yongin, Korea.
Antonie Van Leeuwenhoek. 2000 Dec;78(3-4):237-42. doi: 10.1023/a:1010245310057.
The catabolism of branched chain amino acids, especially valine, appears to play an important role in furnishing building blocks for macrolide and polyether antibiotic biosyntheses. To determine the active site residues of ValDH, we previously cloned, partially characterized, and identified the active site (lysine) of Streptomyces albus ValDH. Here we report further characterization of S. albus ValDH. The molecular weight of S. albus ValDH was determined to be 38 kDa by SDS-PAGE and 67 kDa by gel filtration chromatography indicating that the enzyme is composed of two identical subunits. Optimal pHs were 10.5 and 8.0 for dehydrogenase activity with valine and for reductive amination activity with alpha-ketoisovaleric acid, respectively. Several chemical reagents, which modify amino-acid side chains, inhibited the enzyme activity. To examine the role played by the residue for enzyme specificity, we constructed mutant ValDH by substituting alanine for glycine at position 124 by site-directed mutagenesis. This residue was chosen because it has been considered to be important for substrate discrimination by phenylalanine dehydrogenase (PheDH) and leucine dehydrogenase (LeuDH). The Ala-124-Gly mutant enzyme displayed lower activities toward aliphatic amino acids, but higher activities toward L-phenylalanine, L-tyrosine, and L-methionine compared to the wild type enzyme suggesting that Ala-124 is involved in substrate binding in S. albus ValDH.
支链氨基酸的分解代谢,尤其是缬氨酸的分解代谢,似乎在为大环内酯类和聚醚类抗生素生物合成提供结构单元方面发挥着重要作用。为了确定缬氨酸脱氢酶(ValDH)的活性位点残基,我们之前克隆了白色链霉菌ValDH,对其进行了部分表征,并鉴定了其活性位点(赖氨酸)。在此我们报告对白色链霉菌ValDH的进一步表征。通过SDS-PAGE测定白色链霉菌ValDH的分子量为38 kDa,通过凝胶过滤色谱法测定为67 kDa,这表明该酶由两个相同的亚基组成。以缬氨酸为底物时,脱氢酶活性的最适pH值为10.5,以α-酮异戊酸为底物时,还原胺化活性的最适pH值为8.0。几种修饰氨基酸侧链的化学试剂抑制了该酶的活性。为了研究该残基对酶特异性所起的作用,我们通过定点诱变将第124位的甘氨酸替换为丙氨酸,构建了突变型ValDH。选择该残基是因为它被认为对苯丙氨酸脱氢酶(PheDH)和亮氨酸脱氢酶(LeuDH)的底物识别很重要。与野生型酶相比,Ala-124-Gly突变型酶对脂肪族氨基酸的活性较低,但对L-苯丙氨酸、L-酪氨酸和L-甲硫氨酸的活性较高,这表明Ala-124参与了白色链霉菌ValDH的底物结合。