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1
Novel display of knotted DNA molecules by two-dimensional gel electrophoresis.
Nucleic Acids Res. 2001 Jul 1;29(13):E67-7. doi: 10.1093/nar/29.13.e67.
2
Electrophoretic mobility of supercoiled, catenated and knotted DNA molecules.
Nucleic Acids Res. 2015 Feb 27;43(4):e24. doi: 10.1093/nar/gku1255. Epub 2014 Nov 20.
3
DNA knotting abolishes in vitro chromatin assembly.
J Biol Chem. 1996 Jun 14;271(24):14150-5. doi: 10.1074/jbc.271.24.14150.
4
Quantitative disclosure of DNA knot chirality by high-resolution 2D-gel electrophoresis.
Nucleic Acids Res. 2019 Mar 18;47(5):e29. doi: 10.1093/nar/gkz015.
5
Production of highly knotted DNA by means of cosmid circularization inside phage capsids.
BMC Biotechnol. 2007 Dec 21;7:94. doi: 10.1186/1472-6750-7-94.
7
Numerical simulation of gel electrophoresis of DNA knots in weak and strong electric fields.
Biophys J. 2006 May 1;90(9):3100-5. doi: 10.1529/biophysj.105.070128. Epub 2006 Feb 10.
8
Tightening of DNA knots by supercoiling facilitates their unknotting by type II DNA topoisomerases.
Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3608-11. doi: 10.1073/pnas.1016150108. Epub 2011 Feb 14.
9
Plasmid DNA replication and topology as visualized by two-dimensional agarose gel electrophoresis.
Plasmid. 2010 Jan;63(1):1-10. doi: 10.1016/j.plasmid.2009.11.001. Epub 2009 Nov 16.
10
Two-dimensional agarose gel electrophoresis for analysis of DNA replication.
Methods Mol Biol. 2014;1205:329-40. doi: 10.1007/978-1-4939-1363-3_19.

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Unzipping of knotted DNA via nanopore translocation.
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The Local Topological Free Energy of the SARS-CoV-2 Spike Protein.
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Channels with Helical Modulation Display Stereospecific Sensitivity for Chiral Superstructures.
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Condensin minimizes topoisomerase II-mediated entanglements of DNA in vivo.
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Quantitative Study of the Chiral Organization of the Phage Genome Induced by the Packaging Motor.
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Complex DNA knots detected with a nanopore sensor.
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7
Transcriptional supercoiling boosts topoisomerase II-mediated knotting of intracellular DNA.
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8
Ring Polymers: Threadings, Knot Electrophoresis and Topological Glasses.
Polymers (Basel). 2017 Aug 8;9(8):349. doi: 10.3390/polym9080349.
9
Quantitative disclosure of DNA knot chirality by high-resolution 2D-gel electrophoresis.
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10
DNA knots occur in intracellular chromatin.
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Coating DNA with RecA protein to distinguish DNA path by electron microscopy.
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Isolation of knotted DNA from coliphage P4.
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Sedimentation and electrophoretic migration of DNA knots and catenanes.
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Electrophoretic mobility of DNA knots.
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Probability of DNA knotting and the effective diameter of the DNA double helix.
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Knotting of a DNA chain during ring closure.
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Knotted DNA from bacteriophage capsids.
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