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剩余偶极耦合:核磁共振与结构基因组学之间的协同作用

Residual dipolar couplings: synergy between NMR and structural genomics.

作者信息

Al-Hashimi Hashim M, Patel Dinshaw J

机构信息

Cellular Biochemistry and Biophysics Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

出版信息

J Biomol NMR. 2002 Jan;22(1):1-8. doi: 10.1023/a:1013801714041.

Abstract

Structural genomics is on a quest for the structure and function of a significant fraction of gene products. Current efforts are focusing on structure determination of single-domain proteins, which can readily be targeted by X-ray crystallography, NMR spectroscopy and computational homology modeling. However, comprehensive association of gene products with functions also requires systematic determination of more complex protein structures and other biomolecules participating in cellular processes such as nucleic acids, and characterization of biomolecular interactions and dynamics relevant to function. Such NMR investigations are becoming more feasible, not only due to recent advances in NMR methodology, but also because structural genomics is providing valuable structural information and new experimental and computational tools. The measurement of residual dipolar couplings in partially oriented systems and other new NMR methods will play an important role in this synergistic relationship between NMR and structural genomics. Both an expansion in the domain of NMR application, and important contributions to future structural genomics efforts can be anticipated.

摘要

结构基因组学致力于探寻相当一部分基因产物的结构与功能。当前的工作重点是单结构域蛋白质的结构测定,这类蛋白质能够通过X射线晶体学、核磁共振光谱学以及计算同源建模等方法轻松进行研究。然而,要全面将基因产物与功能关联起来,还需要系统地测定更为复杂的蛋白质结构以及参与细胞过程的其他生物分子(如核酸),并对与功能相关的生物分子相互作用和动力学进行表征。此类核磁共振研究正变得越来越可行,这不仅得益于核磁共振方法学的最新进展,还因为结构基因组学正在提供有价值的结构信息以及新的实验和计算工具。在部分定向体系中测量残余偶极耦合以及其他新的核磁共振方法,将在核磁共振与结构基因组学之间的这种协同关系中发挥重要作用。预计这将既扩大核磁共振的应用领域,又为未来的结构基因组学研究做出重要贡献。

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