Zhang Bo, Wustman Brandon A, Morse Daniel, Evans John Spencer
Laboratory for Chemical Physics, New York University, 345 E. 24th Street, New York, NY 10010, USA.
Biopolymers. 2002 May;63(6):358-69. doi: 10.1002/bip.10069.
The lustrin superfamily represents a unique group of biomineralization proteins localized between layered aragonite mineral plates (i.e., nacre layer) in mollusk shell. Recent atomic force microscopy (AFM) pulling studies have demonstrated that the lustrin-containing organic nacre layer in the abalone, Haliotis rufescens, exhibits a typical sawtooth force-extension curve with hysteretic recovery. This force extension behavior is reminiscent of reversible unfolding and refolding in elastomeric proteins such as titin and tenascin. Since secondary structure plays an important role in force-induced protein unfolding and refolding, the question is, What secondary structure(s) exist within the major domains of Lustrin A? Using a model peptide (FPGKNVNCTSGE) representing the 12-residue consensus sequence found near the N-termini of the first eight cysteine-rich domains (C-domains) within the Lustrin A protein, we employed CD, NMR spectroscopy, and simulated annealing/minimization to determine the secondary structure preferences for this sequence. At pH 7.4, we find that the 12-mer sequence adopts a loop conformation, consisting of a "bend" or "turn" involving residues G3-K4 and N7-C8-T9, with extended conformations arising at F1-G3; K4-V6; T9-S10-G11 in the sequence. Minor pH-dependent conformational effects were noted for this peptide; however, there is no evidence for a salt-bridge interaction between the K4 and E12 side chains. The presence of a loop conformation within the highly conserved -PG-, -NVNCT- sequence of C1-C8 domains may have important structural and mechanistic implications for the Lustrin A protein with regard to elastic behavior.
珍珠层蛋白超家族是一类独特的生物矿化蛋白,位于软体动物贝壳的层状文石矿物板(即珍珠层)之间。最近的原子力显微镜(AFM)拉伸研究表明,皱纹盘鲍(Haliotis rufescens)含珍珠层蛋白的有机珍珠层呈现出典型的锯齿状力-伸长曲线以及滞后恢复现象。这种力-伸长行为让人联想到弹性蛋白如肌联蛋白和腱生蛋白中的可逆展开和重新折叠。由于二级结构在力诱导的蛋白质展开和重新折叠中起重要作用,问题在于,Lustrin A主要结构域中存在哪些二级结构?我们使用一个代表Lustrin A蛋白前八个富含半胱氨酸结构域(C结构域)N端附近发现的12个残基共有序列的模型肽(FPGKNVNCTSGE),采用圆二色光谱(CD)、核磁共振光谱(NMR)以及模拟退火/最小化方法来确定该序列的二级结构偏好。在pH 7.4时,我们发现这个12聚体序列采用环状构象,由涉及残基G3-K4和N7-C8-T9的“弯曲”或“转角”组成,序列中F1-G3、K4-V6、T9-S10-G11处出现伸展构象。该肽存在轻微的pH依赖性构象效应;然而,没有证据表明K4和E12侧链之间存在盐桥相互作用。C1-C8结构域高度保守的-PG-、-NVNCT-序列中存在环状构象,这可能对Lustrin A蛋白的弹性行为具有重要的结构和机制意义。