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剪接体组装过程中前体mRNA的早期组织

Early organization of pre-mRNA during spliceosome assembly.

作者信息

Kent Oliver A, MacMillan Andrew M

机构信息

Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada.

出版信息

Nat Struct Biol. 2002 Aug;9(8):576-81. doi: 10.1038/nsb822.

DOI:10.1038/nsb822
PMID:12091875
Abstract

Intron excision from precursor mRNAs (pre-mRNAs) in eukaryotes requires juxtaposition of reactive functionalities within the substrate at the heart of the spliceosome where the two chemical steps of splicing occur. Although a series of interactions between pre-mRNAs, pre-spliceosomal and spliceosomal factors is well established, the molecular mechanisms of splicing machinery assembly, as well as the temporal basis for organization of the substrate for splicing, remain poorly understood. Here we have used a directed hydroxyl radical probe tethered to pre-mRNA substrates to map the structure of the pre-mRNA substrate during the spliceosome assembly process. These studies indicate an early organization and proximation of conserved pre-mRNA sequences during spliceosome assembly/recruitment and suggest a mechanism for the formation of the final active site of the mature spliceosome.

摘要

真核生物中从前体mRNA(pre-mRNA)切除内含子需要剪接体核心部位底物内反应性功能的并列,剪接的两个化学步骤在此发生。尽管pre-mRNA、前体剪接体和剪接体因子之间的一系列相互作用已得到充分证实,但剪接机制组装的分子机制以及剪接底物组织的时间基础仍知之甚少。在这里,我们使用连接到pre-mRNA底物上的定向羟基自由基探针来绘制剪接体组装过程中pre-mRNA底物的结构。这些研究表明在剪接体组装/募集过程中保守的pre-mRNA序列有早期组织和接近,并提出了成熟剪接体最终活性位点形成的机制。

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1
Early organization of pre-mRNA during spliceosome assembly.剪接体组装过程中前体mRNA的早期组织
Nat Struct Biol. 2002 Aug;9(8):576-81. doi: 10.1038/nsb822.
2
The 5' end of U2 snRNA is in close proximity to U1 and functional sites of the pre-mRNA in early spliceosomal complexes.在早期剪接体复合物中,U2小核RNA的5'端与U1以及前体信使核糖核酸的功能位点紧密相邻。
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Radical probing of spliceosome assembly.剪接体组装的深入探究。
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4
Evidence for two active sites in the spliceosome provided by stereochemistry of pre-mRNA splicing.前体mRNA剪接的立体化学为剪接体中两个活性位点提供的证据。
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The branch site adenosine is recognized differently for the two steps of pre-mRNA splicing.对于前体mRNA剪接的两个步骤,分支位点腺苷的识别方式不同。
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Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing.U1-70K蛋白的硫代磷酸化抑制前体mRNA剪接。
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SR proteins function in coupling RNAP II transcription to pre-mRNA splicing.SR蛋白在将RNA聚合酶II转录与前体mRNA剪接相偶联的过程中发挥作用。
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Pre-mRNA splicing: a complex picture in higher definition.前体mRNA剪接:高清复杂图景
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10
A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing.一种剪接体内含子结合蛋白IBP160,将内含子编码的C/D盒小核仁核糖核蛋白(snoRNP)的位置依赖性组装与前体mRNA剪接联系起来。
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Large-scale remodeling of a repressed exon ribonucleoprotein to an exon definition complex active for splicing.将一个被抑制的外显子核糖核蛋白大规模重塑为一个对剪接有活性的外显子定义复合体。
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Stoichiometries of U2AF35, U2AF65 and U2 snRNP reveal new early spliceosome assembly pathways.U2AF35、U2AF65和U2 snRNP的化学计量揭示了新的早期剪接体组装途径。
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The organization of RNA contacts by PTB for regulation of FAS splicing.PTB对RNA接触的组织以调控FAS剪接。
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