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小鼠ICAM-1可变剪接导致的外显子截短

Exon truncation by alternative splicing of murine ICAM-1.

作者信息

Mizgerd Joseph P, Spieker Matt R, Lupa Michal M

机构信息

Physiology Program, Harvard School of Public Health, Boston, Massachusetts 02115, USA.

出版信息

Physiol Genomics. 2002 Dec 26;12(1):47-51. doi: 10.1152/physiolgenomics.00073.2002.

Abstract

The murine gene for intercellular adhesion molecule-1 (ICAM-1) encodes multiple products, arising from alternative splicing. Full-length ICAM-1 contains five extracellular Ig domains, each encoded by a separate exon. Alternatively spliced forms have Ig domains 2, 3, and/or 4 excised as a result of exon skipping. We report here a novel splice variant of murine ICAM-1, resulting from exon truncation rather than exon skipping and affecting Ig domain 5. A 5' splice donor site within exon 6 generates transcripts missing 69 nucleic acids from the 3' terminus of the exon. This in-frame exon truncation is predicted to replace 24 amino acids within Ig domain 5 with a single aspartic acid residue, yielding a structure other than an Ig domain immediately external to the membrane. Expression of this alternatively spliced form is induced in mouse lungs, spleen, and kidneys during LPS-induced pulmonary inflammation. Since the affected region is critical for ICAM-1 presentation, dimerization, and solubilization, this alternative splice variant may have unique physiological functions.

摘要

小鼠细胞间黏附分子-1(ICAM-1)基因通过可变剪接编码多种产物。全长ICAM-1包含五个细胞外免疫球蛋白结构域,每个结构域由一个单独的外显子编码。可变剪接形式由于外显子跳跃而缺失免疫球蛋白结构域2、3和/或4。我们在此报告一种小鼠ICAM-1的新型剪接变体,它是由外显子截短而非外显子跳跃产生的,并且影响免疫球蛋白结构域5。外显子6内的一个5'剪接供体位点产生的转录本从该外显子的3'末端缺失69个核酸。这种框内外显子截短预计会用一个天冬氨酸残基取代免疫球蛋白结构域5内的24个氨基酸,从而在紧邻膜的外部产生一种不同于免疫球蛋白结构域的结构。在脂多糖诱导的肺部炎症期间,这种可变剪接形式在小鼠肺、脾和肾中被诱导表达。由于受影响的区域对于ICAM-1的呈递、二聚化和溶解至关重要,这种可变剪接变体可能具有独特的生理功能。

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