Zweifel Mark E, Barrick Doug
TC Jenkins Department of Biophysics, The Johns Hopkins University, 3400 North Charles Street, Baltimore, MD 21218, USA.
Biophys Chem. 2002 Dec 10;101-102:221-37. doi: 10.1016/s0301-4622(02)00181-3.
We have used a simple binding model to consider how the thermodynamics of denaturant-protein interactions might influence the shape of protein stability curves (free energy change as a function of temperature), and how these effects translate into a temperature dependence of the apparent m-value (sensitivity of unfolding free energy to denaturant). We find that for an exothermic binding reaction with no binding heat capacity increment, increasing denaturant concentrations produces an apparent increase in curvature in the protein stability curve, giving rise to an increase in the heat capacity increment of unfolding. Similar increases are seen if the binding heat capacity increment is taken as positive. However, for a negative binding heat capacity increment, increasing denaturant concentrations decreases the curvature of the stability curve, giving rise to a decrease in the heat capacity of unfolding. At very high denaturant concentrations (above which the heat capacity of denaturation becomes negative) the stability curve becomes dimpled, showing two separate maxima rather than one. These three models result in very different temperature dependencies of apparent m-values. For urea-induced unfolding of the ankyrin-domain of the Drosophila Notch protein, we find a dependence of experimental m-values on temperature that is similar to that produced by a negative binding heat capacity increment. This temperature dependence is consistent with the observed decrease in heat capacity of unfolding as denaturant is added.
我们使用了一个简单的结合模型来考虑变性剂与蛋白质相互作用的热力学如何影响蛋白质稳定性曲线的形状(自由能变化作为温度的函数),以及这些效应如何转化为表观m值(展开自由能对变性剂的敏感性)的温度依赖性。我们发现,对于一个没有结合热容量增量的放热结合反应,增加变性剂浓度会使蛋白质稳定性曲线的曲率明显增加,导致展开热容量增量增加。如果将结合热容量增量视为正值,也会出现类似的增加。然而,对于负的结合热容量增量,增加变性剂浓度会降低稳定性曲线的曲率,导致展开热容量降低。在非常高的变性剂浓度下(高于此浓度变性热容量变为负值),稳定性曲线会出现凹陷,显示出两个分开的最大值而不是一个。这三种模型导致表观m值的温度依赖性非常不同。对于果蝇Notch蛋白锚蛋白结构域的尿素诱导展开,我们发现实验m值对温度的依赖性与负结合热容量增量产生的依赖性相似。这种温度依赖性与随着变性剂添加展开热容量的观察到的降低是一致的。