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[土壤未培养微生物的群落组成及系统发育分析]

[Community constitute and phylogenetic analysis on soil uncultured microorganism].

作者信息

Chen Hao, Tang Xiaoshu, Lin Jie, Zhang Bosheng, Ren Daming

机构信息

State Key Laboratory of Genetic Engineering, School of Life Science, Fudan University, Shanghai 200433, China.

出版信息

Wei Sheng Wu Xue Bao. 2002 Aug;42(4):478-83.

Abstract

Many evidences show bachteria that can be cultured in lab are only the minority of germs existing in nature. Most of bacteria, containing rich valuable gene resource, are unknown for they are uncultured. To research these uncultured bacteria, Directly extract crude DNA from farm soil, separate 16S rDNA mixture amplified by PCR from the crude DNA, sequence it and compare the sequences with the records of NCBI to classify the germs. The significant microbe community difference from respective soil, which have possibility in developing a new tool for researching soil bacteria diversity were finded.

摘要

许多证据表明,实验室中能够培养的细菌只是自然界中存在的微生物的少数。大多数细菌含有丰富的有价值的基因资源,但由于无法培养而不为人知。为了研究这些未培养的细菌,直接从农田土壤中提取粗DNA,从粗DNA中分离出通过PCR扩增的16S rDNA混合物,对其进行测序,并将序列与NCBI的记录进行比较以对微生物进行分类。发现了来自各自土壤的显著微生物群落差异,这有可能开发出一种研究土壤细菌多样性的新工具。

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