Zhang Min, Thomas Brian C, Napoli Joseph L
Department of Nutritional Sciences and Toxicology, University of California, Berkeley, CA 94720, USA.
Gene. 2003 Feb 13;305(1):121-31. doi: 10.1016/s0378-1119(02)01236-2.
Mouse rdh1 encodes retinol dehydrogenase type 1 (RDH1), a short-chain dehydrogenase, which recognizes as substrates all-trans-retinol, 9-cis-retinol, 5alpha-androstan-3,17-diol and 5alpha-androstan-3-ol-17-one. RDH1 is the most efficient known mouse short-chain dehydrogenase that catalyzes dehydrogenation of all-trans-retinol, and contributes to a reconstituted path of all-trans-retinoic acid biosynthesis, when coexpressed in reporter cells with any one of three retinal dehydrogenases. Rdh1 shows widespread, if not ubiquitous, mRNA expression in the mouse beginning no later than embryo day 7. Here we report genomic organization, chromosomal localization and analysis of a minimum promoter of mouse rdh1. Rdh1 consists of four exons and three introns and spans approximately 14412 bp. Rdh1 is a single copy gene that maps to chromosome 10D3 with rdh5-9, but no known disorder maps precisely to rdh1. Rdh1 has three transcription start sites in kidney and one start site in liver. The rdh1 5'-region between -424 and +43 induces transcription maximally in COS7, mouse kidney RAG, and mouse liver NMu3Li cells. This section has no TATA box, but has a CCAAT box beginning 65 bp upstream of the major transcription start site, which is required for transcription of transfected reporter constructs. An AP1 binding site at -119 also activates transfected reporter constructs, and mediates 2-O-tetradecanoylphorbol-13-acetate (TPA) induced transcription. All-trans-retinoic acid antagonizes the TPA affect; however, no RARE or RXRE was found in the proximal promoter region, consistent with indirect regulation by all-trans-retinoic acid.
小鼠rdh1编码视黄醇脱氢酶1型(RDH1),一种短链脱氢酶,它将全反式视黄醇、9-顺式视黄醇、5α-雄甾烷-3,17-二醇和5α-雄甾烷-3-醇-17-酮识别为底物。RDH1是已知最有效的小鼠短链脱氢酶,可催化全反式视黄醇的脱氢反应,当与三种视网膜脱氢酶中的任何一种在报告细胞中共表达时,有助于全反式视黄酸生物合成的重构途径。Rdh1在小鼠中从胚胎第7天开始就表现出广泛(即便不是无处不在)的mRNA表达。在此我们报告小鼠rdh1的基因组结构、染色体定位及最小启动子分析。Rdh1由四个外显子和三个内含子组成,跨度约为14412 bp。Rdh1是一个单拷贝基因,与rdh5 - 9定位于1D3染色体,但尚无已知疾病精确定位于rdh1。Rdh1在肾脏中有三个转录起始位点,在肝脏中有一个起始位点。rdh1位于 - 424至 + 43之间的5'区域在COS7、小鼠肾脏RAG和小鼠肝脏NMu3Li细胞中诱导转录的能力最强。该区域没有TATA框,但在主要转录起始位点上游65 bp处有一个CCAAT框,这是转染报告构建体转录所必需的。位于 - 119处的一个AP1结合位点也能激活转染的报告构建体,并介导佛波酯(TPA)诱导的转录。全反式视黄酸可拮抗TPA的作用;然而,在近端启动子区域未发现RARE或RXRE,这与全反式视黄酸的间接调节作用一致。