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使用固态核磁共振方法测定蜘蛛丝模型化合物(AGG)(10)中丙氨酸和甘氨酸残基的扭转角。

Determination of the torsion angles of alanine and glycine residues of model compounds of spider silk (AGG)(10) using solid-state NMR methods.

作者信息

Ashida Jun, Ohgo Kosuke, Komatsu Kohei, Kubota Ayumi, Asakura Tetsuo

机构信息

Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan.

出版信息

J Biomol NMR. 2003 Feb;25(2):91-103. doi: 10.1023/a:1022220428948.

DOI:10.1023/a:1022220428948
PMID:12652118
Abstract

Spiders synthesize several kinds of silk fibers. In the primary structure of spider silk, one of the major ampullate (dragline, frame) silks, spidroin 1, and flagelliform silk (core fibers of adhesive spiral), there are common repeated X-Gly-Gly (X = Ala, Leu, Pro, Tyr, Glu, and Arg) sequences, which are considered to be related to the elastic character of these fibers. In this paper, two dimensional spin diffusion solid-state NMR under off magic angle spinning (OMAS), (13)C chemical shift contour plots, and Rotational Echo DOuble Resonance (REDOR) were applied to determine the torsion angles of one Ala and two kinds of Gly residues in the Ala-Gly-Gly sequence of (13)C=O isotope-labeled (Ala-Gly-Gly)(10). The torsion angles were determined to be (phi, psi) = (-90 degrees, 150 degrees ) within an experimental error of +/-10 degrees for each residue. This conformation is characterized as 3(1) helix which is in agreement with the structure proposed from the X-ray powder diffraction pattern of poly(Ala-Gly-Gly). The 3(1) helix of (Ala-Gly-Gly)(10) does not change by formic acid treatment although (Ala-Gly)(15) easily changes from the silk I conformation (the structure of Bombyx mori silk fibroin before spinning in the solid state) to silk II conformation (the structure of the silk fiber after spinning) by such treatment. Thus, the 3(1) helix conformation of (Ala-Gly-Gly)(10) is considered very stable. Furthermore, the torsion angles of the 16th Leu residue of (Leu-Gly-Gly)(10) were also determined as (phi, psi) = (-90 degrees, 150 degrees ) and this peptide is also considered to take 3(1) helix conformation.

摘要

蜘蛛能合成多种丝纤维。在蜘蛛丝的一级结构中,主要的壶腹状(牵引丝、框架丝)丝之一的蜘蛛丝蛋白1和鞭毛状丝(粘性螺旋的核心纤维)中,存在常见的重复X - Gly - Gly(X = Ala、Leu、Pro、Tyr、Glu和Arg)序列,这些序列被认为与这些纤维的弹性特性有关。在本文中,采用非魔角旋转(OMAS)下的二维自旋扩散固态核磁共振、(13)C化学位移等高线图以及旋转回波双共振(REDOR)来确定(13)C = O同位素标记的(Ala - Gly - Gly)(10)的Ala - Gly - Gly序列中一个Ala和两种Gly残基的扭转角。每个残基的扭转角在实验误差±10度范围内确定为(φ,ψ)=(-90度,150度)。这种构象的特征是3(1)螺旋,这与从聚(Ala - Gly - Gly)的X射线粉末衍射图提出的结构一致。尽管(Ala - Gly)(15)通过这种处理容易从丝I构象(家蚕丝素在固态下纺丝前的结构)转变为丝II构象(纺丝后丝纤维的结构),但(Ala - Gly - Gly)(10)的3(1)螺旋不会因甲酸处理而改变。因此,(Ala - Gly - Gly)(10)的3(1)螺旋构象被认为非常稳定。此外,(Leu - Gly - Gly)(10)的第16位Leu残基的扭转角也确定为(φ,ψ)=(-90度,150度),并且该肽也被认为具有3(1)螺旋构象。

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本文引用的文献

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