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嗜热栖热菌二氢叶酸还原酶催化过程中的氢化物转移

Hydride transfer during catalysis by dihydrofolate reductase from Thermotoga maritima.

作者信息

Maglia Giovanni, Javed Masood H, Allemann Rudolf K

机构信息

School of Chemical Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK.

出版信息

Biochem J. 2003 Sep 1;374(Pt 2):529-35. doi: 10.1042/BJ20030412.

Abstract

DHFR (dihydrofolate reductase) catalyses the metabolically important reduction of 7,8-dihydrofolate by NADPH. DHFR from the hyperthermophilic bacterium Thermotoga maritima (TmDHFR), which shares similarity with DHFR from Escherichia coli, has previously been characterized structurally. Its tertiary structure is similar to that of DHFR from E. coli but it is the only DHFR characterized so far that relies on dimerization for stability. The midpoint of the thermal unfolding of TmDHFR was at approx. 83 degrees C, which was 30 degrees C higher than the melting temperature of DHFR from E. coli. The turnover and the hydride-transfer rates in the kinetic scheme of TmDHFR were derived from measurements of the steady-state and pre-steady-state kinetics using absorbance and stopped-flow fluorescence spectroscopy. The rate constant for hydride transfer was found to depend strongly on the temperature and the pH of the solution. Hydride transfer was slow (0.14 s(-1) at 25 degrees C) and at least partially rate limiting at low temperatures but increased dramatically with temperature. At 80 degrees C the hydride-transfer rate of TmDHFR was 20 times lower than that observed for the E. coli enzyme at its physiological temperature. Hydride transfer depended on ionization of a single group in the active site with a p K(a) of 6.0. While at 30 degrees C, turnover of substrate by TmDHFR was almost two orders of magnitude slower than by DHFR from E. coli; the steady-state rates of the two enzymes differed only 8-fold at their respective working temperatures.

摘要

二氢叶酸还原酶(DHFR)催化由NADPH介导的7,8 - 二氢叶酸的代谢重要还原反应。来自嗜热细菌海栖热袍菌(TmDHFR)的DHFR与大肠杆菌的DHFR具有相似性,此前已对其进行了结构表征。它的三级结构与大肠杆菌的DHFR相似,但它是迄今为止所表征的唯一一种依赖二聚化来维持稳定性的DHFR。TmDHFR热解折叠的中点约为83℃,比大肠杆菌DHFR的解链温度高30℃。TmDHFR动力学方案中的周转和氢化物转移速率是通过使用吸光度和停流荧光光谱法测量稳态和预稳态动力学得出的。发现氢化物转移的速率常数强烈依赖于溶液的温度和pH值。氢化物转移速度较慢(25℃时为0.14 s⁻¹),在低温下至少部分是限速步骤,但随着温度升高而显著增加。在80℃时,TmDHFR的氢化物转移速率比大肠杆菌酶在其生理温度下观察到的速率低20倍。氢化物转移依赖于活性位点中单个基团的电离,其pKa为6.0。虽然在30℃时,TmDHFR对底物的周转速度比大肠杆菌的DHFR慢近两个数量级;但在各自的工作温度下,这两种酶的稳态速率仅相差8倍。

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