Pham Audrey S, Reinhart Gregory D
Division of Pathology and Laboratory Medicine, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, USA.
Biophys J. 2003 Jul;85(1):656-66. doi: 10.1016/S0006-3495(03)74509-3.
The allosteric properties of the wild-type Escherichia coli phosphofructokinase were compared to the E187A mutant by using frequency-domain techniques. Tryptophan-shifted mutants comprising of double (W311Y/Y55W and W/311F/F188W) and triple (W311Y/Y55W/E187A and W311F/F188W/E187A) amino acid residue changes, which allowed for better fluorescence probing at targeted sites, were also compared to the wild-type and E187A. The additive nature of multiple mutations allowed one to partition the net effect of modifying residue 187. In general, the mutant enzymes displayed greater heterogeneity in sub-state population than did the wild-type enzyme. The semi-cone angle model was used to quantify the extent of depolarization of the fluorophore. Use of the model presupposes that the extent of depolarization directly correlates with the degree of flexibility of the fluorophore. A relationship has been established between the values determined from the semi-cone angle calculations and the thermodynamic components responsible for the allosteric linkage between the regulatory and substrate binding. Coupling interactions giving rise to positive entropy components are manifested by increasing flexibility of the ternary complexes rather than the binary complexes.
通过频域技术,将野生型大肠杆菌磷酸果糖激酶的变构特性与E187A突变体进行了比较。还将包含双氨基酸残基变化(W311Y/Y55W和W311F/F188W)和三氨基酸残基变化(W311Y/Y55W/E187A和W311F/F188W/E187A)的色氨酸移位突变体与野生型和E187A进行了比较,这些突变体能够在目标位点进行更好的荧光探测。多个突变的累加性质使人们能够区分修饰残基187的净效应。一般来说,与野生型酶相比,突变酶在亚状态群体中表现出更大的异质性。半圆锥角模型用于量化荧光团的去极化程度。该模型的使用前提是去极化程度与荧光团的柔韧性程度直接相关。已经在半圆锥角计算确定的值与负责调节和底物结合之间变构联系的热力学成分之间建立了一种关系。产生正熵成分的偶联相互作用表现为三元复合物而非二元复合物的柔韧性增加。