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泥炭藓生物多样性的全球格局。

Global patterns in peatmoss biodiversity.

作者信息

Shaw A Jonathan, Cox Cymon J, Boles Sandra B

机构信息

Department of Biology, Duke University, Durham, North Carolina 27708-0338, USA.

出版信息

Mol Ecol. 2003 Oct;12(10):2553-70. doi: 10.1046/j.1365-294x.2003.01929.x.

Abstract

DNA sequence data from the nuclear ribosomal internal transcribed spacers (ITS) and the trnL-trnF chloroplast DNA regions were used to quantify geographical partitioning of global biodiversity in peatmosses (Sphagnum), and to compare patterns of molecular diversity with patterns of species richness. Molecular diversity was estimated for boreal, tropical, Neotropical, nonboreal (tropical plus Southern Hemisphere), Old World and New World partitions, based on a total of 436 accessions. Diversity was partitioned among geographical regions in terms of combined nuclear and chloroplast sequence data and separately for the ITS and trnL-trnF data sets. Levels of variation were estimated using phylogenetic diversity (PD), which incorporates branch lengths from a phylogenetic tree, and the number of polymorphic nucleotide sites. Estimates of species richness suggest that peatmoss diversity is higher in New World than Old World regions, and that the Neotropics constitute a "hotspot" of diversity. Molecular estimates, in contrast, indicate that peatmoss biodiversity is almost evenly divided between New and Old World regions, and that the Neotropics account for only 20-35% of global peatmoss diversity. In general, levels of tropical and boreal peatmoss molecular diversity were comparable. Two species, S. sericeum from the Old World tropics and S. lapazense from Bolivia, are remarkably divergent in nucleotide sequences from all other Sphagna and together account for almost 20% of all peatmoss diversity, although they are represented by only three of the 436 accessions (0.7%). These species clearly demonstrate the nonequivalence of species biodiversity value.

摘要

来自核糖体内部转录间隔区(ITS)和叶绿体DNA的trnL-trnF区域的DNA序列数据被用于量化泥炭藓全球生物多样性的地理分布,并将分子多样性模式与物种丰富度模式进行比较。基于总共436份样本,对北方、热带、新热带、非北方(热带加南半球)、旧世界和新世界区域的分子多样性进行了估计。根据核序列和叶绿体序列数据的组合,以及分别针对ITS和trnL-trnF数据集,将多样性划分到不同地理区域。使用系统发育多样性(PD)来估计变异水平,PD纳入了系统发育树的分支长度以及多态性核苷酸位点的数量。物种丰富度估计表明,新世界泥炭藓的多样性高于旧世界地区,新热带地区构成了一个多样性“热点”。相比之下,分子估计表明,泥炭藓生物多样性在新旧世界地区几乎平均分布,新热带地区仅占全球泥炭藓多样性的20%-35%。总体而言,热带和北方泥炭藓的分子多样性水平相当。有两个物种,即来自旧世界热带地区的绢藓(S. sericeum)和来自玻利维亚的拉帕绢藓(S. lapazense),其核苷酸序列与所有其他泥炭藓显著不同,尽管在436份样本中它们仅占3份(0.7%),但却共同占所有泥炭藓多样性的近20%。这些物种清楚地表明了物种生物多样性价值的不等同性。

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