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拓扑参数的本质。I. 拓扑参数是“基本属性”吗?

The nature of topological parameters. I. Are topological parameters 'fundamental properties'?

作者信息

Charton Marvin

机构信息

Chemistry Department, Pratt Institute, Brooklyn, NY 11205, USA.

出版信息

J Comput Aided Mol Des. 2003 Feb-Apr;17(2-4):197-209. doi: 10.1023/a:1025378125128.

Abstract

Topological parameters are often used descriptors in QSAR and QSPR studies. Though easily generated from an appropriate algorithm useful in developing predictive models they are not readily interpretable. Though every molecule has an intrinsic topology it is not clear whether topological parameters are 'fundamental' properties or not. The results of correlations of various properties of sets of molecules with constant topology shows that are a function of the polarizability a alone in the case of nonpolar molecules and of both dipole moment mu and polarizability alpha in the case of polar molecules. Properties studied include melting point, boiling point, critical temperature, heat of melting, heat of vaporization, solubilties of gases in various solvents, and the ratio of the Van der Waals constants (a/b). Types of molecules studied include monatomic (rare gases), diatomic, trigonal pyramidal, and tetrahedral. Our results show that these properties are successfully modeled by alpha and mu. As they are isotopological in each data set they cannot be modeled by topological parameters. It follows then that topological parameters do not have a direct cause and effect relationship with these properties and therefore are not fundamental parameters. The conclusion of Kier and Hall that they represent electron accessibility is incorrect. Topological parameters are composite parameters representing counts of the numbers of atoms, bonds, electrons, and branching.

摘要

拓扑参数常用于定量构效关系(QSAR)和定量构性关系(QSPR)研究中。尽管它们可以通过适用于开发预测模型的算法轻松生成,但却不容易解释。虽然每个分子都有其内在的拓扑结构,但尚不清楚拓扑参数是否为“基本”性质。对具有恒定拓扑结构的分子集的各种性质进行相关性研究的结果表明,对于非极性分子,这些性质仅是极化率α的函数,而对于极性分子,则是偶极矩μ和极化率α两者的函数。所研究的性质包括熔点、沸点、临界温度、熔化热、汽化热、各种溶剂中气体的溶解度以及范德华常数之比(a/b)。所研究的分子类型包括单原子分子(稀有气体)、双原子分子、三角锥形分子和四面体分子。我们的结果表明,这些性质可以通过α和μ成功建模。由于它们在每个数据集中都是同位素拓扑的,因此无法用拓扑参数进行建模。由此可见,拓扑参数与这些性质没有直接的因果关系,因此不是基本参数。基尔(Kier)和霍尔(Hall)认为它们代表电子可及性的结论是不正确的。拓扑参数是复合参数,代表原子数、键数、电子数和支化数的计数。

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