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细菌物种研究的定量方法

QUANTITATIVE APPROACH TO THE STUDY OF BACTERIAL SPECIES.

作者信息

LISTON J, WIEBE W, COLWELL R R

出版信息

J Bacteriol. 1963 May;85(5):1061-70. doi: 10.1128/jb.85.5.1061-1070.1963.

Abstract

Liston, J. (University of Washington, Seattle), W. Wiebe, and R. R. Colwell. Quantitative approach to the study of bacterial species. J. Bacteriol. 85:1061-1070. 1963.-The stability of strains of various species of gram-negative, rod-shaped bacteria was investigated by subculturing each strain through ten different media, testing the substrains so produced through a standard series of tests, and analyzing the resulting data by electronic computer. Strain stability was shown to be high [similarity coefficient (S) >/= 80%], and some evidence was obtained for species stability (S >/= 75%). The limits of variability for a species were studied by use of Pseudomonas aeruginosa; 33 P. aeruginosa strains (from the American Type Culture Collection) were tested and found to share a high level of similarity. An analysis was made of the distribution of positive characters among the strains, and the group was found to have a mean total of 35 characters (out of a possible 78 which were coded and included in the computer analyses) with a range of 33 to 39 positive characters in individual organisms. The frequency of occurrence of each positive character and the probability of mutual occurrence of pairs of positive characters were calculated. By use of the quantitative and qualitative data so obtained, a hypothetical Median Organism for the P. aeruginosa group was derived. The species may then be defined as consisting of all strains which show an S relationship of 75% or more with the Median Organism. The general applicability of this concept is discussed.

摘要

利斯顿,J.(华盛顿大学,西雅图),W. 维贝,以及R. R. 科尔韦尔。细菌物种研究的定量方法。《细菌学杂志》85:1061 - 1070。1963年。——通过将各种革兰氏阴性杆状细菌菌株在十种不同培养基中传代培养,对由此产生的亚菌株进行一系列标准测试,并利用电子计算机分析所得数据,研究了这些菌株的稳定性。结果表明菌株稳定性较高[相似系数(S)≥80%],并且获得了一些物种稳定性(S≥75%)的证据。利用铜绿假单胞菌研究了一个物种的变异限度;对33株铜绿假单胞菌菌株(来自美国典型培养物保藏中心)进行了测试,发现它们具有高度的相似性。分析了这些菌株中阳性特征的分布情况,发现该群体平均共有35个特征(在计算机分析中编码并包含的78个可能特征中),单个生物体的阳性特征范围为33至39个。计算了每个阳性特征的出现频率以及成对阳性特征同时出现的概率。利用如此获得的定量和定性数据,推导出了铜绿假单胞菌群体的一个假设中位生物体。然后可以将该物种定义为由所有与中位生物体显示75%或更高S关系的菌株组成。讨论了这一概念的普遍适用性。

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