Philipps Dana, Celotto Alicia M, Wang Qiao-Qiao, Tarng Rosa S, Graveley Brenton R
Department of Genetics and Developmental Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, CT 06030-3301, USA.
Nucleic Acids Res. 2003 Nov 15;31(22):6502-8. doi: 10.1093/nar/gkg845.
SR proteins are essential pre-mRNA splicing factors that have been shown to bind a number of exonic splicing enhancers where they function to stimulate the splicing of adjacent introns. Members of the SR protein family contain one or two N-terminal RNA binding domains, as well as a C-terminal arginine-serine (RS) rich domain. The RS domains mediate protein-protein interactions with other RS domain containing proteins and are essential for many, but not all, SR protein functions. Hybrid proteins containing an RS domain fused to the bacteriophage MS2 coat protein are sufficient to activate enhancer-dependent splicing in HeLa cell nuclear extract when bound to the pre-mRNA. Here we report progress towards determining the protein sequence requirements for RS domain function. We show that the RS domains from non-SR proteins can also function as splicing activation domains when tethered to the pre-mRNA. Truncation experiments with the RS domain of the human SR protein 9G8 identified a 29 amino acid segment, containing 26 arginine or serine residues, that is sufficient to activate splicing when fused to MS2. We also show that synthetic domains composed solely of RS dipeptides are capable of activating splicing, although their potency is proportional to their size.
SR蛋白是重要的前体mRNA剪接因子,已被证明可结合多个外显子剪接增强子,在这些位置它们发挥作用以刺激相邻内含子的剪接。SR蛋白家族成员包含一个或两个N端RNA结合结构域,以及一个富含C端精氨酸 - 丝氨酸(RS)的结构域。RS结构域介导与其他含RS结构域的蛋白质之间的蛋白质 - 蛋白质相互作用,对于许多(但不是全部)SR蛋白功能而言是必不可少的。当与前体mRNA结合时,含有与噬菌体MS2外壳蛋白融合的RS结构域的杂交蛋白足以在HeLa细胞核提取物中激活依赖增强子的剪接。在此我们报告了确定RS结构域功能的蛋白质序列要求方面的进展。我们表明,来自非SR蛋白的RS结构域在与前体mRNA相连时也可作为剪接激活结构域发挥作用。用人SR蛋白9G8的RS结构域进行的截短实验确定了一个29个氨基酸的片段,该片段包含26个精氨酸或丝氨酸残基,当与MS2融合时足以激活剪接。我们还表明,仅由RS二肽组成的合成结构域能够激活剪接,尽管它们的效力与其大小成正比。