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儿茶酚与氧或氮碱基之间形成的等强度氢键之间被忽视的差异。实验与密度泛函理论计算。

Overlooked difference between hydrogen bonds of equal strength formed between catechol and an oxygen or nitrogen base. Experiments and DFT calculations.

作者信息

Foti Mario C, DiLabio Gino A, Ingold K U

机构信息

Istituto di Chimica Biomolecolare del CNR-Sezione di Catania, Via Del Santuario 110, 1-95028 Valverde (CT), Italy.

出版信息

J Am Chem Soc. 2003 Nov 26;125(47):14642-7. doi: 10.1021/ja036168c.

Abstract

The IR spectrum of catechol in CCl(4) shows two fairly sharp O-H stretching bands of roughly equal absorbance at 3615.0 and 3569.6 cm(-1) due, respectively, to the "free" OH and the intramolecularly H-bonded OH groups. Intermolecular H-bond formation between the "free" OH and a hydrogen bond acceptor (HBA) decreases its stretching frequency by several hundred wavenumbers and simultaneously decreases the frequency of the intramolecularly H-bonded OH by a few tens of wavenumbers. The magnitude of these frequency shifts, Deltaupsilon(inter) and Deltaupsilon(intra), respectively, are very well reproduced by DFT calculations. As would be expected, the magnitudes of Deltaupsilon(inter) and Deltaupsilon(intra) increase as the HB accepting ability of the HBA increases as quantified, on a relative scale, by the HBA's values (Abraham et al. J. Chem. Soc. Perkin Trans. 2 1990, 521). However, plots of experimental, or calculated, frequency shifts versus reveal that Deltaupsilon(inter) and Deltaupsilon(intra) are ca. 40% larger for a nitrogen atom HBA than for an oxygen atom HBA having equal HBA activity. We hypothesize that for HBAs of equal strength, i.e., of equal, the H-bond in (O-H- - -O)(inter) is shorter and, hence, intrinsically stronger than the H-bond in the (O-H- - -N)(inter). However, we further hypothesize that there is more charge separation in the H-bond to N because N is a better proton acceptor than O. Hence, it is the greater Coulombic attraction in (O-H- - -N)(inter) which strengthens this H-bond and compensates for its greater length. Theoretical calculations lend support to these hypotheses.

摘要

儿茶酚在四氯化碳中的红外光谱显示,在3615.0和3569.6 cm⁻¹处有两个相当尖锐的O - H伸缩带,吸光度大致相等,分别对应于“游离”OH和分子内氢键合的OH基团。“游离”OH与氢键受体(HBA)之间形成分子间氢键会使其伸缩频率降低数百波数,同时使分子内氢键合的OH频率降低几十波数。这些频率位移的大小,分别为Δυ(inter)和Δυ(intra),通过密度泛函理论(DFT)计算能很好地重现。正如预期的那样,随着HBA的氢键接受能力增加,Δυ(inter)和Δυ(intra)的大小也会增加,这在相对尺度上由HBA的值来量化(亚伯拉罕等人,《化学学会会刊:珀金 Transactions 2》,1990年,521页)。然而,实验或计算得到的频率位移与[具体内容缺失]的关系图显示,对于具有相同HBA活性的氮原子HBA,Δυ(inter)和Δυ(intra)比氧原子HBA大约大40%。我们假设,对于强度相等的HBA,即具有相等[具体内容缺失]的HBA,(O - H - - -O)(inter)中的氢键更短,因此本质上比(O - H - - -N)(inter)中的氢键更强。然而,我们进一步假设,与N形成的氢键中有更多的电荷分离,因为N是比O更好的质子受体。因此,是(O - H - - -N)(inter)中更大的库仑吸引力加强了这个氢键并弥补了其更长的长度。理论计算支持了这些假设。

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